RNA–Protein interactions for RNA: ENST00000389825.7

GREB1-205, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-205ENST00000389825 TXNDC2Q86VQ3 553 aa23.02■■□□□ 1.28
GREB1-205ENST00000389825 ARHGAP23Q9P227 1491 aa23.02■■□□□ 1.27
GREB1-205ENST00000389825 SLIT1O75093 1534 aa23.01■■□□□ 1.27
GREB1-205ENST00000389825 CFAP65Q6ZU64 1925 aaKnown RBP23.01■■□□□ 1.27
GREB1-205ENST00000389825 ROBO1Q9Y6N7 1651 aa23.01■■□□□ 1.27
GREB1-205ENST00000389825 TET3O43151 1660 aa22.98■■□□□ 1.27
GREB1-205ENST00000389825 LMTK2Q8IWU2 1503 aa22.98■■□□□ 1.27
GREB1-205ENST00000389825 EID1Q9Y6B2 187 aa22.97■■□□□ 1.27
GREB1-205ENST00000389825 CEP152O94986 1710 aa22.97■■□□□ 1.27
GREB1-205ENST00000389825 TMEM94Q12767 1356 aa22.96■■□□□ 1.27
GREB1-205ENST00000389825 UPF1Q92900 1129 aaKnown RBP eCLIP22.94■■□□□ 1.26
GREB1-205ENST00000389825 KCNA6P17658 529 aa22.91■■□□□ 1.26
GREB1-205ENST00000389825 JCADQ9P266 1359 aa22.9■■□□□ 1.26
GREB1-205ENST00000389825 EFCAB6Q5THR3 1501 aa22.9■■□□□ 1.26
GREB1-205ENST00000389825 FOXD1Q16676 465 aa22.89■■□□□ 1.26
GREB1-205ENST00000389825 RPRD2Q5VT52 1461 aaKnown RBP22.89■■□□□ 1.25
GREB1-205ENST00000389825 E9PCH4 1651 aa22.89■■□□□ 1.25
GREB1-205ENST00000389825 PHLPP1O60346 1717 aa22.89■■□□□ 1.25
GREB1-205ENST00000389825 PROSER2Q86WR7 435 aaPredicted RBP22.88■■□□□ 1.25
GREB1-205ENST00000389825 ARHGAP31Q2M1Z3 1444 aa22.88■■□□□ 1.25
GREB1-205ENST00000389825 TMEM2Q9UHN6 1383 aa22.87■■□□□ 1.25
GREB1-205ENST00000389825 ANKRD30BQ9BXX2 1392 aa22.86■■□□□ 1.25
GREB1-205ENST00000389825 ZEB1P37275 1124 aaPredicted RBP22.84■■□□□ 1.25
GREB1-205ENST00000389825 ZNF772Q68DY9 489 aaPredicted RBP22.84■■□□□ 1.25
GREB1-205ENST00000389825 SLAIN2Q9P270 581 aa22.84■■□□□ 1.25
GREB1-205ENST00000389825 MSH6P52701 1360 aa22.82■■□□□ 1.24
GREB1-205ENST00000389825 PIK3C2BO00750 1634 aa22.82■■□□□ 1.24
GREB1-205ENST00000389825 KDM5AP29375 1690 aaKnown RBP22.82■■□□□ 1.24
GREB1-205ENST00000389825 SPHKAPQ2M3C7 1700 aa22.82■■□□□ 1.24
GREB1-205ENST00000389825 NKTRP30414 1462 aaKnown RBP22.82■■□□□ 1.24
GREB1-205ENST00000389825 SRCAPQ6ZRS2 3230 aa22.81■■□□□ 1.24
GREB1-205ENST00000389825 SPATA31A6Q5VVP1 1343 aa22.81■■□□□ 1.24
GREB1-205ENST00000389825 RBM33Q96EV2 1170 aaKnown RBP22.81■■□□□ 1.24
GREB1-205ENST00000389825 STAG3Q9UJ98 1225 aa22.8■■□□□ 1.24
GREB1-205ENST00000389825 CCDC144AA2RUR9 1427 aa22.79■■□□□ 1.24
GREB1-205ENST00000389825 NEUROD1Q13562 356 aa22.79■■□□□ 1.24
GREB1-205ENST00000389825 SLC26A8Q96RN1 970 aa22.79■■□□□ 1.24
GREB1-205ENST00000389825 COL16A1Q07092 1604 aaPredicted RBP22.79■■□□□ 1.24
GREB1-205ENST00000389825 NWD1Q149M9 1564 aa22.79■■□□□ 1.24
GREB1-205ENST00000389825 SIN3AQ96ST3 1273 aa22.78■■□□□ 1.24
GREB1-205ENST00000389825 TRPM2O94759 1503 aa22.76■■□□□ 1.23
GREB1-205ENST00000389825 MEX3CQ5U5Q3 659 aaKnown RBP22.76■■□□□ 1.23
GREB1-205ENST00000389825 TIMELESSQ9UNS1 1208 aa22.76■■□□□ 1.23
GREB1-205ENST00000389825 LRP6O75581 1613 aa22.76■■□□□ 1.23
GREB1-205ENST00000389825 RXRBP28702 533 aa22.74■■□□□ 1.23
GREB1-205ENST00000389825 CDK12Q9NYV4 1490 aaPredicted RBP22.73■■□□□ 1.23
GREB1-205ENST00000389825 NOS1P29475 1434 aa22.73■■□□□ 1.23
GREB1-205ENST00000389825 IDI1Q13907 227 aa22.71■■□□□ 1.23
GREB1-205ENST00000389825 SLC52A1Q9NWF4 448 aa22.71■■□□□ 1.23
GREB1-205ENST00000389825 TONSLQ96HA7 1378 aa22.71■■□□□ 1.23
GREB1-205ENST00000389825 SHPRHQ149N8 1683 aa22.7■■□□□ 1.22
GREB1-205ENST00000389825 CHD2O14647 1828 aaKnown RBP22.68■■□□□ 1.22
GREB1-205ENST00000389825 KIF1BO60333 1816 aa22.68■■□□□ 1.22
GREB1-205ENST00000389825 CLTCL1P53675 1640 aa22.67■■□□□ 1.22
GREB1-205ENST00000389825 NCOA3Q9Y6Q9 1424 aa22.66■■□□□ 1.22
GREB1-205ENST00000389825 AHDC1Q5TGY3 1603 aaPredicted RBP22.65■■□□□ 1.22
GREB1-205ENST00000389825 BCANQ96GW7 911 aa22.64■■□□□ 1.22
GREB1-205ENST00000389825 ADGRB3O60242 1522 aa22.61■■□□□ 1.21
GREB1-205ENST00000389825 CHGAP10645 457 aaKnown RBP22.6■■□□□ 1.21
GREB1-205ENST00000389825 CADPS2Q86UW7 1296 aa22.6■■□□□ 1.21
GREB1-205ENST00000389825 RGL3Q3MIN7 710 aa22.57■■□□□ 1.2
GREB1-205ENST00000389825 PLEKHG1Q9ULL1 1385 aa22.57■■□□□ 1.2
GREB1-205ENST00000389825 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.57■■□□□ 1.2
GREB1-205ENST00000389825 L3MBTL2Q969R5 705 aa22.57■■□□□ 1.2
GREB1-205ENST00000389825 STAC3Q96MF2 364 aa22.57■■□□□ 1.2
GREB1-205ENST00000389825 C19orf44Q9H6X5 657 aa22.57■■□□□ 1.2
GREB1-205ENST00000389825 DIP2AQ14689 1571 aa22.56■■□□□ 1.2
GREB1-205ENST00000389825 SPATA31E1Q6ZUB1 1445 aa22.56■■□□□ 1.2
GREB1-205ENST00000389825 AFF2P51816 1311 aa22.56■■□□□ 1.2
GREB1-205ENST00000389825 ZNF326Q5BKZ1 582 aaKnown RBP22.56■■□□□ 1.2
GREB1-205ENST00000389825 C14orf37Q86TY3 774 aa22.56■■□□□ 1.2
GREB1-205ENST00000389825 NUTM2BA6NNL0 878 aaPredicted RBP22.55■■□□□ 1.2
GREB1-205ENST00000389825 NUTM2EB1AL46 878 aaPredicted RBP22.55■■□□□ 1.2
GREB1-205ENST00000389825 ATF3P18847 181 aa22.55■■□□□ 1.2
GREB1-205ENST00000389825 HDGFP51858 240 aaKnown RBP22.55■■□□□ 1.2
GREB1-205ENST00000389825 NUTM2AQ8IVF1 878 aaPredicted RBP22.55■■□□□ 1.2
GREB1-205ENST00000389825 TBX22Q9Y458 520 aa22.55■■□□□ 1.2
GREB1-205ENST00000389825 RPGRIP1LQ68CZ1 1315 aa22.54■■□□□ 1.2
GREB1-205ENST00000389825 ZFYVE9O95405 1425 aa22.53■■□□□ 1.2
GREB1-205ENST00000389825 DCAF11Q8TEB1 546 aa22.53■■□□□ 1.2
GREB1-205ENST00000389825 PPP1R15AO75807 674 aaPredicted RBP22.52■■□□□ 1.2
GREB1-205ENST00000389825 RBM6P78332 1123 aaKnown RBP22.52■■□□□ 1.2
GREB1-205ENST00000389825 RGS12O14924 1447 aa22.51■■□□□ 1.19
GREB1-205ENST00000389825 TMEM131LA2VDJ0 1609 aa22.51■■□□□ 1.19
GREB1-205ENST00000389825 BRINP3Q76B58 766 aa22.5■■□□□ 1.19
GREB1-205ENST00000389825 MYO5BQ9ULV0 1848 aa22.49■■□□□ 1.19
GREB1-205ENST00000389825 QTRT2Q9H974 415 aaKnown RBP22.49■■□□□ 1.19
GREB1-205ENST00000389825 KDM2AQ9Y2K7 1162 aa22.48■■□□□ 1.19
GREB1-205ENST00000389825 RIMS2Q9UQ26 1411 aa22.47■■□□□ 1.19
GREB1-205ENST00000389825 NUTM2DQ5VT03 806 aaPredicted RBP22.47■■□□□ 1.19
GREB1-205ENST00000389825 PIK3R4Q99570 1358 aa22.47■■□□□ 1.19
GREB1-205ENST00000389825 ZRANB1Q9UGI0 708 aa22.45■■□□□ 1.18
GREB1-205ENST00000389825 VGFO15240 615 aaPredicted RBP22.44■■□□□ 1.18
GREB1-205ENST00000389825 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.44■■□□□ 1.18
GREB1-205ENST00000389825 LRRC59Q96AG4 307 aaKnown RBP22.44■■□□□ 1.18
GREB1-205ENST00000389825 ATAD2Q6PL18 1390 aa22.43■■□□□ 1.18
GREB1-205ENST00000389825 NGLY1Q96IV0 654 aa22.43■■□□□ 1.18
GREB1-205ENST00000389825 PPLO60437 1756 aa22.43■■□□□ 1.18
GREB1-205ENST00000389825 IFT172Q9UG01 1749 aa22.43■■□□□ 1.18
GREB1-205ENST00000389825 C8orf37Q96NL8 207 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms