RNA–Protein interactions for RNA: ENST00000389641.8

CCDC57-202, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-202ENST00000389641 EIF3AQ14152 1382 aaKnown RBP17.16■□□□□ 0.34
CCDC57-202ENST00000389641 NUP153P49790 1475 aaKnown RBP17.15■□□□□ 0.34
CCDC57-202ENST00000389641 ESPNB1AK53 854 aa17.15■□□□□ 0.34
CCDC57-202ENST00000389641 BCL2L13Q9BXK5 485 aa17.15■□□□□ 0.34
CCDC57-202ENST00000389641 RAPGEF6Q8TEU7 1601 aa17.15■□□□□ 0.34
CCDC57-202ENST00000389641 CEP170Q5SW79 1584 aa17.14■□□□□ 0.33
CCDC57-202ENST00000389641 TSPY4P0CV99 314 aa17.14■□□□□ 0.33
CCDC57-202ENST00000389641 TSPY10P0CW01 314 aa17.14■□□□□ 0.33
CCDC57-202ENST00000389641 GRPEL1Q9HAV7 217 aa17.14■□□□□ 0.33
CCDC57-202ENST00000389641 HNRNPMP52272 730 aaKnown RBP eCLIP17.13■□□□□ 0.331e-6■■■■□ 23.2
CCDC57-202ENST00000389641 PCDHB15Q9Y5E8 787 aa17.13■□□□□ 0.33
CCDC57-202ENST00000389641 ARHGEF12Q9NZN5 1544 aa17.13■□□□□ 0.33
CCDC57-202ENST00000389641 MRE11P49959 708 aa17.13■□□□□ 0.33
CCDC57-202ENST00000389641 MFAP1P55081 439 aaKnown RBP17.13■□□□□ 0.33
CCDC57-202ENST00000389641 PDZRN3Q9UPQ7 1066 aa17.13■□□□□ 0.33
CCDC57-202ENST00000389641 PRAG1Q86YV5 1406 aa17.13■□□□□ 0.33
CCDC57-202ENST00000389641 ERBINQ96RT1 1412 aa17.13■□□□□ 0.33
CCDC57-202ENST00000389641 NLRP1Q9C000 1473 aa17.12■□□□□ 0.33
CCDC57-202ENST00000389641 TRMT2AQ8IZ69 625 aaKnown RBP17.12■□□□□ 0.33
CCDC57-202ENST00000389641 CGNL1Q0VF96 1302 aa17.12■□□□□ 0.33
CCDC57-202ENST00000389641 TRIM44Q96DX7 344 aaPredicted RBP17.11■□□□□ 0.33
CCDC57-202ENST00000389641 INSRP06213 1382 aa17.11■□□□□ 0.33
CCDC57-202ENST00000389641 COL17A1Q9UMD9 1497 aaPredicted RBP17.11■□□□□ 0.33
CCDC57-202ENST00000389641 GPATCH8Q9UKJ3 1502 aaKnown RBP17.11■□□□□ 0.33
CCDC57-202ENST00000389641 CENPJQ9HC77 1338 aaPredicted RBP17.1■□□□□ 0.33
CCDC57-202ENST00000389641 NKTRP30414 1462 aaKnown RBP17.1■□□□□ 0.33
CCDC57-202ENST00000389641 AMER1Q5JTC6 1135 aaPredicted RBP17.1■□□□□ 0.33
CCDC57-202ENST00000389641 E9PSI1 815 aa17.09■□□□□ 0.33
CCDC57-202ENST00000389641 ARID3AQ99856 593 aa17.09■□□□□ 0.33
CCDC57-202ENST00000389641 CHMP5Q9NZZ3 219 aa17.09■□□□□ 0.33
CCDC57-202ENST00000389641 RLBP1P12271 317 aa17.09■□□□□ 0.33
CCDC57-202ENST00000389641 RRP7AQ9Y3A4 280 aaKnown RBP17.09■□□□□ 0.33
CCDC57-202ENST00000389641 PDE3AQ14432 1141 aa17.08■□□□□ 0.32
CCDC57-202ENST00000389641 CCDC144AA2RUR9 1427 aa17.08■□□□□ 0.32
CCDC57-202ENST00000389641 GAS2L3Q86XJ1 694 aa17.07■□□□□ 0.32
CCDC57-202ENST00000389641 SYNJ2O15056 1496 aa17.07■□□□□ 0.32
CCDC57-202ENST00000389641 MAGI2Q86UL8 1455 aa17.07■□□□□ 0.32
CCDC57-202ENST00000389641 ADCY10Q96PN6 1610 aa17.07■□□□□ 0.32
CCDC57-202ENST00000389641 PLEKHG5O94827 1062 aa17.07■□□□□ 0.32
CCDC57-202ENST00000389641 C22orf23Q9BZE7 217 aa17.07■□□□□ 0.32
CCDC57-202ENST00000389641 ADGRL2O95490 1459 aa17.05■□□□□ 0.32
CCDC57-202ENST00000389641 MAGI1Q96QZ7 1491 aaPredicted RBP17.05■□□□□ 0.32
CCDC57-202ENST00000389641 RBM10P98175 930 aaKnown RBP17.05■□□□□ 0.32
CCDC57-202ENST00000389641 C9orf84Q5VXU9 1444 aa17.05■□□□□ 0.32
CCDC57-202ENST00000389641 TROQ12816 1431 aaPredicted RBP17.05■□□□□ 0.32
CCDC57-202ENST00000389641 FOXD4L1Q9NU39 408 aa17.05■□□□□ 0.32
CCDC57-202ENST00000389641 PODXL2Q9NZ53 605 aa17.04■□□□□ 0.32
CCDC57-202ENST00000389641 PLEKHD1A6NEE1 506 aa17.04■□□□□ 0.32
CCDC57-202ENST00000389641 KDM5DQ9BY66 1539 aa17.03■□□□□ 0.32
CCDC57-202ENST00000389641 PMFBP1Q8TBY8 1022 aa17.03■□□□□ 0.32
CCDC57-202ENST00000389641 ADGBQ8N7X0 1667 aa17.02■□□□□ 0.32
CCDC57-202ENST00000389641 KIAA1211Q6ZU35 1233 aa17.02■□□□□ 0.32
CCDC57-202ENST00000389641 CROCC2H7BZ55 1655 aa17.02■□□□□ 0.31
CCDC57-202ENST00000389641 ITSN2Q9NZM3 1697 aa17.02■□□□□ 0.31
CCDC57-202ENST00000389641 TRPM1Q7Z4N2 1603 aa17.01■□□□□ 0.31
CCDC57-202ENST00000389641 TNNT2P45379 298 aaPredicted RBP17.01■□□□□ 0.31
CCDC57-202ENST00000389641 WWC1Q8IX03 1113 aa17.01■□□□□ 0.31
CCDC57-202ENST00000389641 HSCBQ8IWL3 235 aa17■□□□□ 0.31
CCDC57-202ENST00000389641 GPRASP1Q5JY77 1395 aa17■□□□□ 0.31
CCDC57-202ENST00000389641 A2MP01023 1474 aa17■□□□□ 0.31
CCDC57-202ENST00000389641 RARSP54136 660 aaKnown RBP16.99■□□□□ 0.31
CCDC57-202ENST00000389641 DDX11L8A8MPP1 907 aa16.99■□□□□ 0.31
CCDC57-202ENST00000389641 RWDD1Q9H446 243 aaPredicted RBP16.99■□□□□ 0.31
CCDC57-202ENST00000389641 TNPO1Q92973 898 aaKnown RBP16.98■□□□□ 0.31
CCDC57-202ENST00000389641 VIRMAQ69YN4 1812 aaKnown RBP16.98■□□□□ 0.31
CCDC57-202ENST00000389641 WDR7Q9Y4E6 1490 aa16.98■□□□□ 0.31
CCDC57-202ENST00000389641 NUP160Q12769 1436 aa16.98■□□□□ 0.31
CCDC57-202ENST00000389641 CARMIL2Q6F5E8 1435 aa16.97■□□□□ 0.31
CCDC57-202ENST00000389641 A0A0U1RQG5 324 aaPredicted RBP16.97■□□□□ 0.31
CCDC57-202ENST00000389641 ZNF692Q9BU19 519 aaPredicted RBP16.96■□□□□ 0.31
CCDC57-202ENST00000389641 PDCL3Q9H2J4 239 aa16.96■□□□□ 0.31
CCDC57-202ENST00000389641 FAM13BQ9NYF5 915 aa16.95■□□□□ 0.3
CCDC57-202ENST00000389641 TPM2P07951 284 aa16.95■□□□□ 0.3
CCDC57-202ENST00000389641 PLA2R1Q13018 1463 aa16.94■□□□□ 0.3
CCDC57-202ENST00000389641 PTPRGP23470 1445 aa16.94■□□□□ 0.3
CCDC57-202ENST00000389641 FAM135AQ9P2D6 1515 aa16.93■□□□□ 0.3
CCDC57-202ENST00000389641 ABCA8O94911 1581 aa16.93■□□□□ 0.3
CCDC57-202ENST00000389641 ATP10BO94823 1461 aa16.93■□□□□ 0.3
CCDC57-202ENST00000389641 HSP90AB1P08238 724 aaKnown RBP16.93■□□□□ 0.3
CCDC57-202ENST00000389641 PRDM15P57071 1507 aaPredicted RBP16.93■□□□□ 0.3
CCDC57-202ENST00000389641 ERCC6L2Q5T890 1561 aa16.92■□□□□ 0.3
CCDC57-202ENST00000389641 FTSJ3Q8IY81 847 aaKnown RBP16.91■□□□□ 0.3
CCDC57-202ENST00000389641 R3HCC1Q9Y3T6 440 aaKnown RBP16.91■□□□□ 0.3
CCDC57-202ENST00000389641 CDC42BPAQ5VT25 1732 aa16.9■□□□□ 0.3
CCDC57-202ENST00000389641 NASPP49321 788 aaPredicted RBP16.9■□□□□ 0.3
CCDC57-202ENST00000389641 TCP11L2Q8N4U5 519 aa16.9■□□□□ 0.3
CCDC57-202ENST00000389641 RTEL1-TNFRSF6BF6WH68 1400 aa16.9■□□□□ 0.3
CCDC57-202ENST00000389641 PIK3C2GO75747 1445 aa16.9■□□□□ 0.3
CCDC57-202ENST00000389641 ZBTB7CA1YPR0 619 aa16.89■□□□□ 0.29
CCDC57-202ENST00000389641 RIPK4P57078 832 aa16.89■□□□□ 0.29
CCDC57-202ENST00000389641 GBP4Q96PP9 640 aa16.89■□□□□ 0.29
CCDC57-202ENST00000389641 ABCC10Q5T3U5 1492 aa16.89■□□□□ 0.29
CCDC57-202ENST00000389641 MSNP26038 577 aaKnown RBP16.88■□□□□ 0.29
CCDC57-202ENST00000389641 CARD14Q9BXL6 1004 aa16.88■□□□□ 0.29
CCDC57-202ENST00000389641 CD2BP2O95400 341 aaKnown RBP16.88■□□□□ 0.29
CCDC57-202ENST00000389641 ASXL1Q8IXJ9 1541 aa16.88■□□□□ 0.29
CCDC57-202ENST00000389641 NCLP19338 710 aaKnown RBP16.87■□□□□ 0.29
CCDC57-202ENST00000389641 MVPQ14764 893 aaKnown RBP16.87■□□□□ 0.29
CCDC57-202ENST00000389641 CDCA8Q53HL2 280 aa16.87■□□□□ 0.29
CCDC57-202ENST00000389641 ZSCAN30Q86W11 494 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms