RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 RCCD1A6NED2 376 aa10□□□□□ -0.81
SNAPC3-201ENST00000380799 OATP04181 439 aa10□□□□□ -0.81
SNAPC3-201ENST00000380799 KMT5BQ4FZB7 885 aa10□□□□□ -0.81
SNAPC3-201ENST00000380799 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.99□□□□□ -0.81
SNAPC3-201ENST00000380799 HIC1Q14526 733 aa9.99□□□□□ -0.81
SNAPC3-201ENST00000380799 PRKD2Q9BZL6 878 aa9.99□□□□□ -0.81
SNAPC3-201ENST00000380799 V9GY48 417 aaPredicted RBP9.99□□□□□ -0.81
SNAPC3-201ENST00000380799 TESPA1A2RU30 521 aaPredicted RBP9.98□□□□□ -0.81
SNAPC3-201ENST00000380799 ZPR1O75312 459 aa9.98□□□□□ -0.81
SNAPC3-201ENST00000380799 TMUB1Q9BVT8 246 aa9.98□□□□□ -0.81
SNAPC3-201ENST00000380799 Q6ZNB5 142 aa9.97□□□□□ -0.81
SNAPC3-201ENST00000380799 RSPH4AQ5TD94 716 aa9.96□□□□□ -0.82
SNAPC3-201ENST00000380799 ACTN4O43707 911 aaKnown RBP9.95□□□□□ -0.82
SNAPC3-201ENST00000380799 NKX2-3Q8TAU0 364 aa9.95□□□□□ -0.82
SNAPC3-201ENST00000380799 FAM161AQ3B820 660 aa9.94□□□□□ -0.82
SNAPC3-201ENST00000380799 PXYLP1Q8TE99 480 aa9.94□□□□□ -0.82
SNAPC3-201ENST00000380799 GFRA3O60609 400 aa9.93□□□□□ -0.82
SNAPC3-201ENST00000380799 CFHP08603 1231 aa9.93□□□□□ -0.82
SNAPC3-201ENST00000380799 RBM26Q5T8P6 1007 aaKnown RBP9.93□□□□□ -0.82
SNAPC3-201ENST00000380799 BLOC1S3Q6QNY0 202 aa9.93□□□□□ -0.82
SNAPC3-201ENST00000380799 GNPATO15228 680 aa9.92□□□□□ -0.82
SNAPC3-201ENST00000380799 HAP1P54257 671 aaPredicted RBP9.91□□□□□ -0.82
SNAPC3-201ENST00000380799 METTL3Q86U44 580 aaKnown RBP9.91□□□□□ -0.82
SNAPC3-201ENST00000380799 NRG2O14511 850 aaPredicted RBP9.89□□□□□ -0.83
SNAPC3-201ENST00000380799 NR1I2O75469 434 aa9.89□□□□□ -0.83
SNAPC3-201ENST00000380799 SLC10A3P09131 477 aa9.88□□□□□ -0.83
SNAPC3-201ENST00000380799 RNF223E7ERA6 249 aa9.85□□□□□ -0.83
SNAPC3-201ENST00000380799 GPR37O15354 613 aa9.84□□□□□ -0.83
SNAPC3-201ENST00000380799 TLL1O43897 1013 aa9.84□□□□□ -0.83
SNAPC3-201ENST00000380799 ADH1BP00325 375 aa9.84□□□□□ -0.83
SNAPC3-201ENST00000380799 ANKLE1Q8NAG6 615 aa9.84□□□□□ -0.83
SNAPC3-201ENST00000380799 DAXXQ9UER7 740 aaPredicted RBP9.84□□□□□ -0.83
SNAPC3-201ENST00000380799 PDZRN3Q9UPQ7 1066 aa9.84□□□□□ -0.83
SNAPC3-201ENST00000380799 TULP1O00294 542 aaPredicted RBP9.83□□□□□ -0.84
SNAPC3-201ENST00000380799 TRAF7Q6Q0C0 670 aa9.83□□□□□ -0.84
SNAPC3-201ENST00000380799 GPIHBP1Q8IV16 184 aa9.83□□□□□ -0.84
SNAPC3-201ENST00000380799 FECHP22830 423 aa9.82□□□□□ -0.84
SNAPC3-201ENST00000380799 SLC19A1P41440 591 aa9.82□□□□□ -0.84
SNAPC3-201ENST00000380799 SULF1Q8IWU6 871 aa9.82□□□□□ -0.84
SNAPC3-201ENST00000380799 RDH13Q8NBN7 331 aa9.81□□□□□ -0.84
SNAPC3-201ENST00000380799 S1PR4O95977 384 aa9.8□□□□□ -0.84
SNAPC3-201ENST00000380799 SCUBE3Q8IX30 993 aa9.8□□□□□ -0.84
SNAPC3-201ENST00000380799 DDX11L8A8MPP1 907 aa9.79□□□□□ -0.84
SNAPC3-201ENST00000380799 SLC6A16Q9GZN6 736 aa9.79□□□□□ -0.84
SNAPC3-201ENST00000380799 KDM2AQ9Y2K7 1162 aa9.79□□□□□ -0.84
SNAPC3-201ENST00000380799 VSIG10Q8N0Z9 540 aa9.78□□□□□ -0.84
SNAPC3-201ENST00000380799 SPSB2Q99619 263 aa9.77□□□□□ -0.85
SNAPC3-201ENST00000380799 ATP6V1AP38606 617 aa9.76□□□□□ -0.85
SNAPC3-201ENST00000380799 PUS10Q3MIT2 529 aaKnown RBP9.76□□□□□ -0.85
SNAPC3-201ENST00000380799 SPRYD7Q5W111 196 aa9.76□□□□□ -0.85
SNAPC3-201ENST00000380799 ZNF598Q86UK7 904 aaKnown RBP9.76□□□□□ -0.85
SNAPC3-201ENST00000380799 PPEF1O14829 653 aaPredicted RBP9.74□□□□□ -0.85
SNAPC3-201ENST00000380799 GCGRP47871 477 aa9.74□□□□□ -0.85
SNAPC3-201ENST00000380799 MORN1Q5T089 497 aa9.74□□□□□ -0.85
SNAPC3-201ENST00000380799 FUT2Q10981 343 aa9.73□□□□□ -0.85
SNAPC3-201ENST00000380799 GRIPAP1Q4V328 841 aa9.73□□□□□ -0.85
SNAPC3-201ENST00000380799 LCE2BO14633 110 aa9.72□□□□□ -0.85
SNAPC3-201ENST00000380799 PRR20EP86478 221 aa9.72□□□□□ -0.85
SNAPC3-201ENST00000380799 PRR20CP86479 221 aa9.72□□□□□ -0.85
SNAPC3-201ENST00000380799 PRR20DP86480 221 aa9.72□□□□□ -0.85
SNAPC3-201ENST00000380799 PRR20BP86481 221 aa9.72□□□□□ -0.85
SNAPC3-201ENST00000380799 PRR20AP86496 221 aa9.72□□□□□ -0.85
SNAPC3-201ENST00000380799 MAP2K5Q13163 448 aa9.72□□□□□ -0.85
SNAPC3-201ENST00000380799 EMID1Q96A84 441 aaPredicted RBP9.72□□□□□ -0.85
SNAPC3-201ENST00000380799 FMNL1O95466 1100 aaPredicted RBP9.71□□□□□ -0.86
SNAPC3-201ENST00000380799 ZNF697Q5TEC3 545 aa9.71□□□□□ -0.86
SNAPC3-201ENST00000380799 LIAT1Q6ZQX7 453 aa9.71□□□□□ -0.86
SNAPC3-201ENST00000380799 NLRP7Q8WX94 980 aa9.71□□□□□ -0.86
SNAPC3-201ENST00000380799 PHOX2BQ99453 314 aa9.71□□□□□ -0.86
SNAPC3-201ENST00000380799 SALL2Q9Y467 1007 aaPredicted RBP9.71□□□□□ -0.86
SNAPC3-201ENST00000380799 TRIM67Q6ZTA4 783 aa9.7□□□□□ -0.86
SNAPC3-201ENST00000380799 PKDCCQ504Y2 493 aa9.69□□□□□ -0.86
SNAPC3-201ENST00000380799 DGAT1O75907 488 aa9.68□□□□□ -0.86
SNAPC3-201ENST00000380799 THAP11Q96EK4 314 aa9.68□□□□□ -0.86
SNAPC3-201ENST00000380799 SLC27A5Q9Y2P5 690 aa9.68□□□□□ -0.86
SNAPC3-201ENST00000380799 MINK1Q8N4C8 1332 aaPredicted RBP9.67□□□□□ -0.86
SNAPC3-201ENST00000380799 RPIAP49247 311 aa9.67□□□□□ -0.86
SNAPC3-201ENST00000380799 LMOD2Q6P5Q4 547 aa9.67□□□□□ -0.86
SNAPC3-201ENST00000380799 IRF6O14896 467 aa9.66□□□□□ -0.86
SNAPC3-201ENST00000380799 Q3C1V9 767 aa9.66□□□□□ -0.86
SNAPC3-201ENST00000380799 PLA2G2CQ5R387 149 aa9.65□□□□□ -0.86
SNAPC3-201ENST00000380799 BRICD5Q6PL45 260 aa9.65□□□□□ -0.86
SNAPC3-201ENST00000380799 GDF9O60383 454 aa9.64□□□□□ -0.87
SNAPC3-201ENST00000380799 CD2BP2O95400 341 aaKnown RBP9.64□□□□□ -0.87
SNAPC3-201ENST00000380799 CD46P15529 392 aa9.64□□□□□ -0.87
SNAPC3-201ENST00000380799 FCF1Q9Y324 198 aaKnown RBP9.64□□□□□ -0.87
SNAPC3-201ENST00000380799 USP46P62068 366 aa9.63□□□□□ -0.87
SNAPC3-201ENST00000380799 MSS51Q4VC12 460 aa9.63□□□□□ -0.87
SNAPC3-201ENST00000380799 FAM160A2Q8N612 972 aaPredicted RBP9.63□□□□□ -0.87
SNAPC3-201ENST00000380799 TNFRSF10AO00220 468 aa9.62□□□□□ -0.87
SNAPC3-201ENST00000380799 KDM4AO75164 1064 aa9.62□□□□□ -0.87
SNAPC3-201ENST00000380799 ZNF787Q6DD87 383 aa9.62□□□□□ -0.87
SNAPC3-201ENST00000380799 FAM187AA6NFU0 413 aa9.61□□□□□ -0.87
SNAPC3-201ENST00000380799 MDM2Q00987 491 aaPredicted RBP9.61□□□□□ -0.87
SNAPC3-201ENST00000380799 ZBTB24O43167 697 aaPredicted RBP9.6□□□□□ -0.87
SNAPC3-201ENST00000380799 CLCN1P35523 988 aa9.59□□□□□ -0.87
SNAPC3-201ENST00000380799 MYT1Q01538 1121 aa9.59□□□□□ -0.87
SNAPC3-201ENST00000380799 RNF19BQ6ZMZ0 732 aa9.59□□□□□ -0.87
SNAPC3-201ENST00000380799 FOXC1Q12948 553 aa9.58□□□□□ -0.88
SNAPC3-201ENST00000380799 KRI1Q8N9T8 703 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms