RNA–Protein interactions for RNA: ENST00000380691.2

MSL3-204, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-204ENST00000380691 ATAD2Q6PL18 1390 aa9.52□□□□□ -0.88
MSL3-204ENST00000380691 ABCC3O15438 1527 aa9.52□□□□□ -0.88
MSL3-204ENST00000380691 UBTFP17480 764 aaKnown RBP9.52□□□□□ -0.89
MSL3-204ENST00000380691 TIAM1Q13009 1591 aa9.52□□□□□ -0.89
MSL3-204ENST00000380691 RBM42Q9BTD8 480 aaKnown RBP9.52□□□□□ -0.89
MSL3-204ENST00000380691 DAXXQ9UER7 740 aaPredicted RBP9.52□□□□□ -0.89
MSL3-204ENST00000380691 ZBTB12Q9Y330 459 aaPredicted RBP9.52□□□□□ -0.89
MSL3-204ENST00000380691 XIRP1Q702N8 1843 aaKnown RBP9.52□□□□□ -0.89
MSL3-204ENST00000380691 PHLPP1O60346 1717 aa9.51□□□□□ -0.89
MSL3-204ENST00000380691 CHRDL2Q6WN34 429 aa9.51□□□□□ -0.89
MSL3-204ENST00000380691 LRRIQ1Q96JM4 1722 aa9.51□□□□□ -0.89
MSL3-204ENST00000380691 TMEM2Q9UHN6 1383 aa9.5□□□□□ -0.89
MSL3-204ENST00000380691 SETBP1Q9Y6X0 1596 aa9.5□□□□□ -0.89
MSL3-204ENST00000380691 NUTM2BA6NNL0 878 aaPredicted RBP9.5□□□□□ -0.89
MSL3-204ENST00000380691 NUTM2EB1AL46 878 aaPredicted RBP9.5□□□□□ -0.89
MSL3-204ENST00000380691 RBM6P78332 1123 aaKnown RBP9.5□□□□□ -0.89
MSL3-204ENST00000380691 NUTM2DQ5VT03 806 aaPredicted RBP9.5□□□□□ -0.89
MSL3-204ENST00000380691 NUTM2AQ8IVF1 878 aaPredicted RBP9.5□□□□□ -0.89
MSL3-204ENST00000380691 CAMSAP2Q08AD1 1489 aa9.5□□□□□ -0.89
MSL3-204ENST00000380691 FYCO1Q9BQS8 1478 aa9.5□□□□□ -0.89
MSL3-204ENST00000380691 AFF2P51816 1311 aa9.5□□□□□ -0.89
MSL3-204ENST00000380691 CCDC141Q6ZP82 1450 aa9.49□□□□□ -0.89
MSL3-204ENST00000380691 RBM33Q96EV2 1170 aaKnown RBP9.49□□□□□ -0.89
MSL3-204ENST00000380691 BCANQ96GW7 911 aa9.49□□□□□ -0.89
MSL3-204ENST00000380691 ZNF644Q9H582 1327 aaPredicted RBP9.49□□□□□ -0.89
MSL3-204ENST00000380691 SP7Q8TDD2 431 aaPredicted RBP9.48□□□□□ -0.89
MSL3-204ENST00000380691 NWD1Q149M9 1564 aa9.48□□□□□ -0.89
MSL3-204ENST00000380691 AHDC1Q5TGY3 1603 aaPredicted RBP9.48□□□□□ -0.89
MSL3-204ENST00000380691 UBR1Q8IWV7 1749 aa9.48□□□□□ -0.89
MSL3-204ENST00000380691 NGLY1Q96IV0 654 aa9.46□□□□□ -0.9
MSL3-204ENST00000380691 NCOA3Q9Y6Q9 1424 aa9.46□□□□□ -0.9
MSL3-204ENST00000380691 SHPRHQ149N8 1683 aa9.45□□□□□ -0.9
MSL3-204ENST00000380691 RSPH4AQ5TD94 716 aa9.45□□□□□ -0.9
MSL3-204ENST00000380691 SLC26A8Q96RN1 970 aa9.45□□□□□ -0.9
MSL3-204ENST00000380691 QTRT2Q9H974 415 aaKnown RBP9.45□□□□□ -0.9
MSL3-204ENST00000380691 MTUS2Q5JR59 1369 aa9.45□□□□□ -0.9
MSL3-204ENST00000380691 PRKCSHP14314 528 aaPredicted RBP9.44□□□□□ -0.9
MSL3-204ENST00000380691 ARHGAP31Q2M1Z3 1444 aa9.44□□□□□ -0.9
MSL3-204ENST00000380691 TET3O43151 1660 aa9.43□□□□□ -0.9
MSL3-204ENST00000380691 CADPS2Q86UW7 1296 aa9.43□□□□□ -0.9
MSL3-204ENST00000380691 CCDC125Q86Z20 511 aa9.43□□□□□ -0.9
MSL3-204ENST00000380691 STAG3Q9UJ98 1225 aa9.43□□□□□ -0.9
MSL3-204ENST00000380691 DIP2AQ14689 1571 aa9.42□□□□□ -0.9
MSL3-204ENST00000380691 EFCAB6Q5THR3 1501 aa9.42□□□□□ -0.9
MSL3-204ENST00000380691 C8orf37Q96NL8 207 aa9.42□□□□□ -0.9
MSL3-204ENST00000380691 KDM5AP29375 1690 aaKnown RBP9.42□□□□□ -0.9
MSL3-204ENST00000380691 SETD5Q9C0A6 1442 aa9.41□□□□□ -0.9
MSL3-204ENST00000380691 PLCB2Q00722 1185 aa9.41□□□□□ -0.9
MSL3-204ENST00000380691 FKBP8Q14318 412 aa9.41□□□□□ -0.9
MSL3-204ENST00000380691 TSPY4P0CV99 314 aa9.4□□□□□ -0.9
MSL3-204ENST00000380691 TSPY10P0CW01 314 aa9.4□□□□□ -0.9
MSL3-204ENST00000380691 ATF3P18847 181 aa9.4□□□□□ -0.9
MSL3-204ENST00000380691 BRINP3Q76B58 766 aa9.4□□□□□ -0.9
MSL3-204ENST00000380691 C14orf37Q86TY3 774 aa9.4□□□□□ -0.9
MSL3-204ENST00000380691 TAOK2Q9UL54 1235 aa9.4□□□□□ -0.9
MSL3-204ENST00000380691 CEP162Q5TB80 1403 aa9.39□□□□□ -0.91
MSL3-204ENST00000380691 LRP5O75197 1615 aa9.39□□□□□ -0.91
MSL3-204ENST00000380691 MROH1Q8NDA8 1641 aa9.39□□□□□ -0.91
MSL3-204ENST00000380691 C19orf44Q9H6X5 657 aa9.39□□□□□ -0.91
MSL3-204ENST00000380691 EIF2AK4Q9P2K8 1649 aaKnown RBP9.38□□□□□ -0.91
MSL3-204ENST00000380691 EHBP1L1Q8N3D4 1523 aa9.38□□□□□ -0.91
MSL3-204ENST00000380691 PIK3C2BO00750 1634 aa9.38□□□□□ -0.91
MSL3-204ENST00000380691 MAST1Q9Y2H9 1570 aa9.37□□□□□ -0.91
MSL3-204ENST00000380691 LRRC59Q96AG4 307 aaKnown RBP9.37□□□□□ -0.91
MSL3-204ENST00000380691 TRPC5Q9UL62 973 aaPredicted RBP9.37□□□□□ -0.91
MSL3-204ENST00000380691 ARHGEF5Q12774 1597 aa9.37□□□□□ -0.91
MSL3-204ENST00000380691 PNPLA6Q8IY17 1366 aa9.37□□□□□ -0.91
MSL3-204ENST00000380691 PLEKHG1Q9ULL1 1385 aa9.37□□□□□ -0.91
MSL3-204ENST00000380691 ASXL1Q8IXJ9 1541 aa9.36□□□□□ -0.91
MSL3-204ENST00000380691 DCCP43146 1447 aa9.36□□□□□ -0.91
MSL3-204ENST00000380691 BLMP54132 1417 aaPredicted RBP9.35□□□□□ -0.91
MSL3-204ENST00000380691 IDI1Q13907 227 aa9.35□□□□□ -0.91
MSL3-204ENST00000380691 ADGRB3O60242 1522 aa9.35□□□□□ -0.91
MSL3-204ENST00000380691 NHSL1Q5SYE7 1610 aa9.34□□□□□ -0.91
MSL3-204ENST00000380691 ATRNO75882 1429 aa9.34□□□□□ -0.91
MSL3-204ENST00000380691 USP21Q9UK80 565 aa9.34□□□□□ -0.91
MSL3-204ENST00000380691 PPP1R15AO75807 674 aaPredicted RBP9.33□□□□□ -0.92
MSL3-204ENST00000380691 ADAMTS2O95450 1211 aa9.33□□□□□ -0.92
MSL3-204ENST00000380691 TBX22Q9Y458 520 aa9.33□□□□□ -0.92
MSL3-204ENST00000380691 PIK3R4Q99570 1358 aa9.33□□□□□ -0.92
MSL3-204ENST00000380691 ZFYVE9O95405 1425 aa9.32□□□□□ -0.92
MSL3-204ENST00000380691 HAP1P54257 671 aaPredicted RBP9.32□□□□□ -0.92
MSL3-204ENST00000380691 FNBP4Q8N3X1 1017 aaPredicted RBP9.32□□□□□ -0.92
MSL3-204ENST00000380691 PTCH1Q13635 1447 aa9.31□□□□□ -0.92
MSL3-204ENST00000380691 DUOX2Q9NRD8 1548 aa9.31□□□□□ -0.92
MSL3-204ENST00000380691 YY1P25490 414 aa9.31□□□□□ -0.92
MSL3-204ENST00000380691 IFFO2Q5TF58 517 aa9.31□□□□□ -0.92
MSL3-204ENST00000380691 SLC52A1Q9NWF4 448 aa9.31□□□□□ -0.92
MSL3-204ENST00000380691 KANK1Q14678 1352 aa9.31□□□□□ -0.92
MSL3-204ENST00000380691 CEP152O94986 1710 aa9.31□□□□□ -0.92
MSL3-204ENST00000380691 NOS1P29475 1434 aa9.31□□□□□ -0.92
MSL3-204ENST00000380691 MST1RQ04912 1400 aa9.31□□□□□ -0.92
MSL3-204ENST00000380691 ERBINQ96RT1 1412 aa9.31□□□□□ -0.92
MSL3-204ENST00000380691 HDGFP51858 240 aaKnown RBP9.3□□□□□ -0.92
MSL3-204ENST00000380691 SF3B2Q13435 895 aaKnown RBP9.3□□□□□ -0.92
MSL3-204ENST00000380691 ARXQ96QS3 562 aa9.3□□□□□ -0.92
MSL3-204ENST00000380691 LMTK2Q8IWU2 1503 aa9.3□□□□□ -0.92
MSL3-204ENST00000380691 RIMS2Q9UQ26 1411 aa9.3□□□□□ -0.92
MSL3-204ENST00000380691 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.29□□□□□ -0.92
MSL3-204ENST00000380691 HRCP23327 699 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms