RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 PDE4DQ08499 809 aa8.8□□□□□ -1
SSX1-201ENST00000376919 RBM26Q5T8P6 1007 aaKnown RBP8.8□□□□□ -1
SSX1-201ENST00000376919 CCDC18Q5T9S5 1454 aa8.8□□□□□ -1
SSX1-201ENST00000376919 ATP10BO94823 1461 aa8.79□□□□□ -1
SSX1-201ENST00000376919 ABCC10Q5T3U5 1492 aa8.79□□□□□ -1
SSX1-201ENST00000376919 FAM69CQ0P6D2 419 aa8.79□□□□□ -1
SSX1-201ENST00000376919 ARID3AQ99856 593 aa8.79□□□□□ -1
SSX1-201ENST00000376919 METRNQ9UJH8 293 aa8.79□□□□□ -1
SSX1-201ENST00000376919 EPRSP07814 1512 aaKnown RBP8.79□□□□□ -1
SSX1-201ENST00000376919 CASKIN1Q8WXD9 1431 aa8.79□□□□□ -1
SSX1-201ENST00000376919 POTEIP0CG38 1075 aa8.78□□□□□ -1
SSX1-201ENST00000376919 NPM2Q86SE8 214 aaKnown RBP8.78□□□□□ -1
SSX1-201ENST00000376919 KIF14Q15058 1648 aa8.78□□□□□ -1
SSX1-201ENST00000376919 CFAP43Q8NDM7 1665 aa8.78□□□□□ -1
SSX1-201ENST00000376919 HRCP23327 699 aa8.77□□□□□ -1.01
SSX1-201ENST00000376919 MAP3K9P80192 1104 aa8.77□□□□□ -1.01
SSX1-201ENST00000376919 KCNH8Q96L42 1107 aa8.77□□□□□ -1.01
SSX1-201ENST00000376919 CDK11AQ9UQ88 783 aaPredicted RBP8.77□□□□□ -1.01
SSX1-201ENST00000376919 PLEKHD1A6NEE1 506 aa8.76□□□□□ -1.01
SSX1-201ENST00000376919 VPS8Q8N3P4 1428 aa8.76□□□□□ -1.01
SSX1-201ENST00000376919 GLI2P10070 1586 aa8.76□□□□□ -1.01
SSX1-201ENST00000376919 MAP3K4Q9Y6R4 1608 aa8.76□□□□□ -1.01
SSX1-201ENST00000376919 OXER1Q8TDS5 423 aa8.75□□□□□ -1.01
SSX1-201ENST00000376919 C1orf115Q9H7X2 142 aa8.75□□□□□ -1.01
SSX1-201ENST00000376919 C3orf67Q6ZVT6 689 aa8.74□□□□□ -1.01
SSX1-201ENST00000376919 UPF1Q92900 1129 aaKnown RBP eCLIP8.74□□□□□ -1.01
SSX1-201ENST00000376919 MYO5CQ9NQX4 1742 aa8.74□□□□□ -1.01
SSX1-201ENST00000376919 ABCA9Q8IUA7 1624 aa8.73□□□□□ -1.01
SSX1-201ENST00000376919 TEX14Q8IWB6 1497 aa8.73□□□□□ -1.01
SSX1-201ENST00000376919 FLIIQ13045 1269 aa8.73□□□□□ -1.01
SSX1-201ENST00000376919 CFAP74Q9C0B2 1584 aa8.73□□□□□ -1.01
SSX1-201ENST00000376919 MTUS2Q5JR59 1369 aa8.73□□□□□ -1.01
SSX1-201ENST00000376919 KDM6BO15054 1643 aa8.72□□□□□ -1.01
SSX1-201ENST00000376919 EHBP1L1Q8N3D4 1523 aa8.72□□□□□ -1.01
SSX1-201ENST00000376919 TIAM1Q13009 1591 aa8.72□□□□□ -1.01
SSX1-201ENST00000376919 TTC37Q6PGP7 1564 aa8.72□□□□□ -1.01
SSX1-201ENST00000376919 TROQ12816 1431 aaPredicted RBP8.71□□□□□ -1.01
SSX1-201ENST00000376919 CD109Q6YHK3 1445 aa8.71□□□□□ -1.01
SSX1-201ENST00000376919 ZNF316A6NFI3 1004 aaPredicted RBP8.71□□□□□ -1.02
SSX1-201ENST00000376919 DDRGK1Q96HY6 314 aa8.71□□□□□ -1.02
SSX1-201ENST00000376919 PPRC1Q5VV67 1664 aaKnown RBP8.71□□□□□ -1.02
SSX1-201ENST00000376919 SUPT6HQ7KZ85 1726 aaKnown RBP8.71□□□□□ -1.02
SSX1-201ENST00000376919 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.7□□□□□ -1.02
SSX1-201ENST00000376919 GRXCR2A6NFK2 248 aa8.7□□□□□ -1.02
SSX1-201ENST00000376919 APBB1O00213 710 aa8.7□□□□□ -1.02
SSX1-201ENST00000376919 TBC1D12O60347 775 aa8.7□□□□□ -1.02
SSX1-201ENST00000376919 PTGER2P43116 358 aa8.7□□□□□ -1.02
SSX1-201ENST00000376919 FAM117AQ9C073 453 aa8.7□□□□□ -1.02
SSX1-201ENST00000376919 ITSN2Q9NZM3 1697 aa8.69□□□□□ -1.02
SSX1-201ENST00000376919 PTCD2Q8WV60 388 aaKnown RBP8.69□□□□□ -1.02
SSX1-201ENST00000376919 PLSCR2Q9NRY7 297 aa8.69□□□□□ -1.02
SSX1-201ENST00000376919 ARHGAP5Q13017 1502 aa8.69□□□□□ -1.02
SSX1-201ENST00000376919 SLC34A2O95436 690 aa8.68□□□□□ -1.02
SSX1-201ENST00000376919 MAGI3Q5TCQ9 1506 aa8.68□□□□□ -1.02
SSX1-201ENST00000376919 PREX2Q70Z35 1606 aa8.68□□□□□ -1.02
SSX1-201ENST00000376919 ZBTB7CA1YPR0 619 aa8.67□□□□□ -1.02
SSX1-201ENST00000376919 EVI5O60447 810 aa8.67□□□□□ -1.02
SSX1-201ENST00000376919 PDIA4P13667 645 aaKnown RBP8.67□□□□□ -1.02
SSX1-201ENST00000376919 CDC42BPAQ5VT25 1732 aa8.66□□□□□ -1.02
SSX1-201ENST00000376919 GPR37O15354 613 aa8.66□□□□□ -1.02
SSX1-201ENST00000376919 OSBPP22059 807 aa8.66□□□□□ -1.02
SSX1-201ENST00000376919 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.66□□□□□ -1.02
SSX1-201ENST00000376919 FANCAO15360 1455 aa8.65□□□□□ -1.02
SSX1-201ENST00000376919 MINK1Q8N4C8 1332 aaPredicted RBP8.65□□□□□ -1.02
SSX1-201ENST00000376919 PLEKHG3A1L390 1219 aa8.65□□□□□ -1.02
SSX1-201ENST00000376919 DDX12PQ92771 950 aa8.65□□□□□ -1.02
SSX1-201ENST00000376919 CCDC9Q9Y3X0 531 aaKnown RBP8.65□□□□□ -1.02
SSX1-201ENST00000376919 CCNB3Q8WWL7 1395 aa8.64□□□□□ -1.03
SSX1-201ENST00000376919 CDC42BPBQ9Y5S2 1711 aa8.64□□□□□ -1.03
SSX1-201ENST00000376919 MAP3K1Q13233 1512 aa8.64□□□□□ -1.03
SSX1-201ENST00000376919 LRRC9Q6ZRR7 1453 aa8.64□□□□□ -1.03
SSX1-201ENST00000376919 NEO1Q92859 1461 aa8.64□□□□□ -1.03
SSX1-201ENST00000376919 NUTM2FA1L443 756 aa8.63□□□□□ -1.03
SSX1-201ENST00000376919 MAP2K5Q13163 448 aa8.63□□□□□ -1.03
SSX1-201ENST00000376919 AMHR2Q16671 573 aa8.63□□□□□ -1.03
SSX1-201ENST00000376919 ANO8Q9HCE9 1232 aaPredicted RBP8.63□□□□□ -1.03
SSX1-201ENST00000376919 GOPCQ9HD26 462 aa8.62□□□□□ -1.03
SSX1-201ENST00000376919 ZNF777Q9ULD5 760 aaPredicted RBP8.62□□□□□ -1.03
SSX1-201ENST00000376919 ARAP3Q8WWN8 1544 aa8.62□□□□□ -1.03
SSX1-201ENST00000376919 ADGRL1O94910 1474 aa8.62□□□□□ -1.03
SSX1-201ENST00000376919 NCOA2Q15596 1464 aa8.62□□□□□ -1.03
SSX1-201ENST00000376919 PLCH2O75038 1416 aa8.62□□□□□ -1.03
SSX1-201ENST00000376919 A6NJR5 290 aa8.61□□□□□ -1.03
SSX1-201ENST00000376919 ONECUT3O60422 494 aaPredicted RBP8.61□□□□□ -1.03
SSX1-201ENST00000376919 CCDC102AQ96A19 550 aa8.61□□□□□ -1.03
SSX1-201ENST00000376919 MYT1LQ9UL68 1186 aa8.61□□□□□ -1.03
SSX1-201ENST00000376919 AKNAQ7Z591 1439 aa8.61□□□□□ -1.03
SSX1-201ENST00000376919 PRIM1P49642 420 aaKnown RBP8.6□□□□□ -1.03
SSX1-201ENST00000376919 EFCAB2Q5VUJ9 269 aa8.6□□□□□ -1.03
SSX1-201ENST00000376919 PARP9Q8IXQ6 854 aa8.6□□□□□ -1.03
SSX1-201ENST00000376919 PHLDB1Q86UU1 1377 aa8.6□□□□□ -1.03
SSX1-201ENST00000376919 DENND4BO75064 1496 aaPredicted RBP8.59□□□□□ -1.03
SSX1-201ENST00000376919 FCHSD2O94868 740 aa8.59□□□□□ -1.03
SSX1-201ENST00000376919 CCDC82Q8N4S0 544 aa8.59□□□□□ -1.03
SSX1-201ENST00000376919 CFDP1Q9UEE9 299 aaPredicted RBP8.59□□□□□ -1.03
SSX1-201ENST00000376919 SAMD9LQ8IVG5 1584 aa8.59□□□□□ -1.03
SSX1-201ENST00000376919 RICTORQ6R327 1708 aa8.59□□□□□ -1.03
SSX1-201ENST00000376919 ABCC1P33527 1531 aa8.59□□□□□ -1.03
SSX1-201ENST00000376919 SYCP2Q9BX26 1530 aa8.59□□□□□ -1.03
SSX1-201ENST00000376919 HIC1Q14526 733 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms