RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 KDM5AP29375 1690 aaKnown RBP14.21□□□□□ -0.13
ABCF1-202ENST00000376545 ASXL1Q8IXJ9 1541 aa14.21□□□□□ -0.14
ABCF1-202ENST00000376545 CDCA7LQ96GN5 454 aa14.21□□□□□ -0.14
ABCF1-202ENST00000376545 AMER1Q5JTC6 1135 aaPredicted RBP14.2□□□□□ -0.14
ABCF1-202ENST00000376545 MYO3AQ8NEV4 1616 aa14.2□□□□□ -0.14
ABCF1-202ENST00000376545 PIK3C2GO75747 1445 aa14.2□□□□□ -0.14
ABCF1-202ENST00000376545 AFAP1Q8N556 730 aa14.19□□□□□ -0.14
ABCF1-202ENST00000376545 KIF1BO60333 1816 aa14.19□□□□□ -0.14
ABCF1-202ENST00000376545 FANCAO15360 1455 aa14.19□□□□□ -0.14
ABCF1-202ENST00000376545 ABCA6Q8N139 1617 aa14.19□□□□□ -0.14
ABCF1-202ENST00000376545 NRXN1Q9ULB1 1477 aa14.18□□□□□ -0.14
ABCF1-202ENST00000376545 CDCA8Q53HL2 280 aa14.18□□□□□ -0.14
ABCF1-202ENST00000376545 NOP58Q9Y2X3 529 aaKnown RBP14.18□□□□□ -0.14
ABCF1-202ENST00000376545 LMTK2Q8IWU2 1503 aa14.18□□□□□ -0.14
ABCF1-202ENST00000376545 PPP2R1AP30153 589 aa14.17□□□□□ -0.14
ABCF1-202ENST00000376545 MYT1LQ9UL68 1186 aa14.17□□□□□ -0.14
ABCF1-202ENST00000376545 ZNF521Q96K83 1311 aa14.17□□□□□ -0.14
ABCF1-202ENST00000376545 EFCAB6Q5THR3 1501 aa14.17□□□□□ -0.14
ABCF1-202ENST00000376545 TCERG1O14776 1098 aaKnown RBP14.17□□□□□ -0.14
ABCF1-202ENST00000376545 KIDINS220Q9ULH0 1771 aa14.17□□□□□ -0.14
ABCF1-202ENST00000376545 ADAMTS8Q9UP79 889 aa14.16□□□□□ -0.14
ABCF1-202ENST00000376545 MROH2AA6NES4 1674 aa14.16□□□□□ -0.14
ABCF1-202ENST00000376545 IPO9Q96P70 1041 aaKnown RBP14.16□□□□□ -0.14
ABCF1-202ENST00000376545 KANK1Q14678 1352 aa14.16□□□□□ -0.14
ABCF1-202ENST00000376545 EIF3AQ14152 1382 aaKnown RBP14.15□□□□□ -0.14
ABCF1-202ENST00000376545 MS4A1P11836 297 aa14.15□□□□□ -0.14
ABCF1-202ENST00000376545 KNSTRNQ9Y448 316 aa14.15□□□□□ -0.14
ABCF1-202ENST00000376545 SALL2Q9Y467 1007 aaPredicted RBP14.15□□□□□ -0.14
ABCF1-202ENST00000376545 PPRC1Q5VV67 1664 aaKnown RBP14.14□□□□□ -0.15
ABCF1-202ENST00000376545 ERVK-7P63135 1459 aa14.14□□□□□ -0.15
ABCF1-202ENST00000376545 ADGRL1O94910 1474 aa14.14□□□□□ -0.15
ABCF1-202ENST00000376545 PLEKHH1Q9ULM0 1364 aa14.13□□□□□ -0.15
ABCF1-202ENST00000376545 PAK3O75914 559 aaPredicted RBP14.13□□□□□ -0.15
ABCF1-202ENST00000376545 SETBP1Q9Y6X0 1596 aa14.13□□□□□ -0.15
ABCF1-202ENST00000376545 ZC3H13Q5T200 1668 aaKnown RBP14.12□□□□□ -0.15
ABCF1-202ENST00000376545 SLC24A1O60721 1099 aa14.12□□□□□ -0.15
ABCF1-202ENST00000376545 UGGT1Q9NYU2 1555 aa14.12□□□□□ -0.15
ABCF1-202ENST00000376545 ANP32AP39687 249 aaKnown RBP14.12□□□□□ -0.15
ABCF1-202ENST00000376545 DUSP27Q5VZP5 1158 aa14.11□□□□□ -0.15
ABCF1-202ENST00000376545 ADGRB3O60242 1522 aa14.11□□□□□ -0.15
ABCF1-202ENST00000376545 SBNO2Q9Y2G9 1366 aa14.11□□□□□ -0.15
ABCF1-202ENST00000376545 TRMT2AQ8IZ69 625 aaKnown RBP14.11□□□□□ -0.15
ABCF1-202ENST00000376545 BACH2Q9BYV9 841 aa14.1□□□□□ -0.15
ABCF1-202ENST00000376545 PPLO60437 1756 aa14.09□□□□□ -0.15
ABCF1-202ENST00000376545 CRBNQ96SW2 442 aa14.08□□□□□ -0.15
ABCF1-202ENST00000376545 PLIN1O60240 522 aa14.08□□□□□ -0.16
ABCF1-202ENST00000376545 PDE4AP27815 886 aa14.08□□□□□ -0.16
ABCF1-202ENST00000376545 KDM2BQ8NHM5 1336 aa14.08□□□□□ -0.16
ABCF1-202ENST00000376545 KIF3BO15066 747 aa14.08□□□□□ -0.16
ABCF1-202ENST00000376545 ASXL2Q76L83 1435 aa14.07□□□□□ -0.16
ABCF1-202ENST00000376545 WDR43Q15061 677 aaKnown RBP eCLIP14.07□□□□□ -0.16
ABCF1-202ENST00000376545 ZNF518AQ6AHZ1 1483 aa14.06□□□□□ -0.16
ABCF1-202ENST00000376545 CFAP74Q9C0B2 1584 aa14.06□□□□□ -0.16
ABCF1-202ENST00000376545 ADGRF5Q8IZF2 1346 aa14.06□□□□□ -0.16
ABCF1-202ENST00000376545 SLFN5Q08AF3 891 aa14.06□□□□□ -0.16
ABCF1-202ENST00000376545 USP32Q8NFA0 1604 aa14.06□□□□□ -0.16
ABCF1-202ENST00000376545 FRMPD1Q5SYB0 1578 aa14.05□□□□□ -0.16
ABCF1-202ENST00000376545 GOLGA2Q08379 1002 aa14.05□□□□□ -0.16
ABCF1-202ENST00000376545 CFAP70Q5T0N1 1121 aa14.05□□□□□ -0.16
ABCF1-202ENST00000376545 SHPRHQ149N8 1683 aa14.05□□□□□ -0.16
ABCF1-202ENST00000376545 ADGRB1O14514 1584 aa14.04□□□□□ -0.16
ABCF1-202ENST00000376545 C20orf194Q5TEA3 1177 aa14.04□□□□□ -0.16
ABCF1-202ENST00000376545 ZBTB47Q9UFB7 747 aaPredicted RBP14.04□□□□□ -0.16
ABCF1-202ENST00000376545 CARD14Q9BXL6 1004 aa14.04□□□□□ -0.16
ABCF1-202ENST00000376545 QRICH2Q9H0J4 1663 aa14.03□□□□□ -0.16
ABCF1-202ENST00000376545 NGEFQ8N5V2 710 aa14.03□□□□□ -0.16
ABCF1-202ENST00000376545 MLH3Q9UHC1 1453 aa14.03□□□□□ -0.16
ABCF1-202ENST00000376545 HECW2Q9P2P5 1572 aa14.03□□□□□ -0.16
ABCF1-202ENST00000376545 POLR3AO14802 1390 aaPredicted RBP14.02□□□□□ -0.16
ABCF1-202ENST00000376545 NKTRP30414 1462 aaKnown RBP14.02□□□□□ -0.17
ABCF1-202ENST00000376545 PIK3C2BO00750 1634 aa14.01□□□□□ -0.17
ABCF1-202ENST00000376545 NPATQ14207 1427 aa14□□□□□ -0.17
ABCF1-202ENST00000376545 ANO8Q9HCE9 1232 aaPredicted RBP14□□□□□ -0.17
ABCF1-202ENST00000376545 NOS1P29475 1434 aa14□□□□□ -0.17
ABCF1-202ENST00000376545 POGZQ7Z3K3 1410 aa14□□□□□ -0.17
ABCF1-202ENST00000376545 CENPQQ7L2Z9 268 aaPredicted RBP14□□□□□ -0.17
ABCF1-202ENST00000376545 SIGLEC1Q9BZZ2 1709 aa13.98□□□□□ -0.17
ABCF1-202ENST00000376545 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.98□□□□□ -0.17
ABCF1-202ENST00000376545 C14orf93Q9H972 538 aaKnown RBP13.98□□□□□ -0.17
ABCF1-202ENST00000376545 SPINK5Q9NQ38 1064 aaPredicted RBP13.98□□□□□ -0.17
ABCF1-202ENST00000376545 CAMSAP1Q5T5Y3 1602 aa13.98□□□□□ -0.17
ABCF1-202ENST00000376545 ABCC3O15438 1527 aa13.97□□□□□ -0.17
ABCF1-202ENST00000376545 DEKP35659 375 aaKnown RBP13.97□□□□□ -0.17
ABCF1-202ENST00000376545 IQSEC2Q5JU85 1478 aa13.96□□□□□ -0.17
ABCF1-202ENST00000376545 E9PSI1 815 aa13.96□□□□□ -0.17
ABCF1-202ENST00000376545 RPGRIP1LQ68CZ1 1315 aa13.96□□□□□ -0.17
ABCF1-202ENST00000376545 CENPJQ9HC77 1338 aaPredicted RBP13.96□□□□□ -0.17
ABCF1-202ENST00000376545 ARHGEF28Q8N1W1 1705 aaKnown RBP13.96□□□□□ -0.17
ABCF1-202ENST00000376545 APAF1O14727 1248 aa13.96□□□□□ -0.18
ABCF1-202ENST00000376545 VIRMAQ69YN4 1812 aaKnown RBP13.96□□□□□ -0.18
ABCF1-202ENST00000376545 CCDC146Q8IYE0 955 aa13.95□□□□□ -0.18
ABCF1-202ENST00000376545 PUS7Q96PZ0 661 aaKnown RBP13.95□□□□□ -0.18
ABCF1-202ENST00000376545 RIMBP3CA6NJZ7 1639 aa13.95□□□□□ -0.18
ABCF1-202ENST00000376545 RIMBP3BA6NNM3 1639 aa13.95□□□□□ -0.18
ABCF1-202ENST00000376545 RIMBP3Q9UFD9 1639 aa13.95□□□□□ -0.18
ABCF1-202ENST00000376545 GLI2P10070 1586 aa13.94□□□□□ -0.18
ABCF1-202ENST00000376545 NEXMIFQ5QGS0 1516 aa13.93□□□□□ -0.18
ABCF1-202ENST00000376545 NBR1Q14596 966 aa13.93□□□□□ -0.18
ABCF1-202ENST00000376545 NINLQ9Y2I6 1382 aa13.93□□□□□ -0.18
ABCF1-202ENST00000376545 SKAP1Q86WV1 359 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms