RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 MYO5BQ9ULV0 1848 aa17.54■□□□□ 0.4
PRPF4-202ENST00000374199 NBPF1Q3BBV0 1214 aa17.53■□□□□ 0.4
PRPF4-202ENST00000374199 KTN1Q86UP2 1357 aaKnown RBP17.53■□□□□ 0.4
PRPF4-202ENST00000374199 FAM69CQ0P6D2 419 aa17.53■□□□□ 0.4
PRPF4-202ENST00000374199 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
PRPF4-202ENST00000374199 PRKRIP1Q9H875 184 aaPredicted RBP17.52■□□□□ 0.4
PRPF4-202ENST00000374199 CLTCQ00610 1675 aaKnown RBP17.52■□□□□ 0.4
PRPF4-202ENST00000374199 ST20-MTHFSA0A0A6YYL1 179 aa17.51■□□□□ 0.39
PRPF4-202ENST00000374199 SBNO2Q9Y2G9 1366 aa17.51■□□□□ 0.39
PRPF4-202ENST00000374199 RPGRIP1LQ68CZ1 1315 aa17.5■□□□□ 0.39
PRPF4-202ENST00000374199 KDM2AQ9Y2K7 1162 aa17.5■□□□□ 0.39
PRPF4-202ENST00000374199 ERVK-7P63135 1459 aa17.5■□□□□ 0.39
PRPF4-202ENST00000374199 SETD1AO15047 1707 aaKnown RBP17.49■□□□□ 0.39
PRPF4-202ENST00000374199 ARHGEF28Q8N1W1 1705 aaKnown RBP17.49■□□□□ 0.39
PRPF4-202ENST00000374199 DISP3Q9P2K9 1392 aa17.48■□□□□ 0.39
PRPF4-202ENST00000374199 RGL3Q3MIN7 710 aa17.47■□□□□ 0.39
PRPF4-202ENST00000374199 ZNF326Q5BKZ1 582 aaKnown RBP17.45■□□□□ 0.38
PRPF4-202ENST00000374199 QRICH2Q9H0J4 1663 aa17.45■□□□□ 0.38
PRPF4-202ENST00000374199 CFAP65Q6ZU64 1925 aaKnown RBP17.45■□□□□ 0.38
PRPF4-202ENST00000374199 YTHDC1Q96MU7 727 aaKnown RBP17.44■□□□□ 0.38
PRPF4-202ENST00000374199 ASXL1Q8IXJ9 1541 aa17.44■□□□□ 0.38
PRPF4-202ENST00000374199 WASHC2CQ9Y4E1 1318 aa17.44■□□□□ 0.38
PRPF4-202ENST00000374199 PARD3Q8TEW0 1356 aa17.43■□□□□ 0.38
PRPF4-202ENST00000374199 PER1O15534 1290 aaPredicted RBP17.42■□□□□ 0.38
PRPF4-202ENST00000374199 ADGRF5Q8IZF2 1346 aa17.42■□□□□ 0.38
PRPF4-202ENST00000374199 USP32Q8NFA0 1604 aa17.41■□□□□ 0.38
PRPF4-202ENST00000374199 EIF3AQ14152 1382 aaKnown RBP17.41■□□□□ 0.38
PRPF4-202ENST00000374199 INSRP06213 1382 aa17.39■□□□□ 0.37
PRPF4-202ENST00000374199 SLC52A1Q9NWF4 448 aa17.39■□□□□ 0.37
PRPF4-202ENST00000374199 GGT6Q6P531 493 aa17.38■□□□□ 0.37
PRPF4-202ENST00000374199 C14orf93Q9H972 538 aaKnown RBP17.38■□□□□ 0.37
PRPF4-202ENST00000374199 MYT1LQ9UL68 1186 aa17.38■□□□□ 0.37
PRPF4-202ENST00000374199 NRXN3Q9Y4C0 1643 aa17.37■□□□□ 0.37
PRPF4-202ENST00000374199 NPC1L1Q9UHC9 1359 aa17.37■□□□□ 0.37
PRPF4-202ENST00000374199 LRPPRCP42704 1394 aaKnown RBP17.36■□□□□ 0.37
PRPF4-202ENST00000374199 GTF3C3Q9Y5Q9 886 aa17.36■□□□□ 0.37
PRPF4-202ENST00000374199 CCDC184Q52MB2 194 aa17.35■□□□□ 0.37
PRPF4-202ENST00000374199 A2ML1A8K2U0 1454 aa17.34■□□□□ 0.37
PRPF4-202ENST00000374199 KNDC1Q76NI1 1749 aa17.34■□□□□ 0.37
PRPF4-202ENST00000374199 BRD4O60885 1362 aaPredicted RBP17.33■□□□□ 0.37
PRPF4-202ENST00000374199 SLC24A1O60721 1099 aa17.33■□□□□ 0.37
PRPF4-202ENST00000374199 UBR1Q8IWV7 1749 aa17.33■□□□□ 0.36
PRPF4-202ENST00000374199 TMF1P82094 1093 aa17.33■□□□□ 0.36
PRPF4-202ENST00000374199 DLC1Q96QB1 1528 aa17.32■□□□□ 0.36
PRPF4-202ENST00000374199 RALBP1Q15311 655 aa17.32■□□□□ 0.36
PRPF4-202ENST00000374199 ALKQ9UM73 1620 aa17.31■□□□□ 0.36
PRPF4-202ENST00000374199 PTPRMP28827 1452 aa17.3■□□□□ 0.36
PRPF4-202ENST00000374199 IDI1Q13907 227 aa17.3■□□□□ 0.36
PRPF4-202ENST00000374199 CFAP70Q5T0N1 1121 aa17.3■□□□□ 0.36
PRPF4-202ENST00000374199 TULP4Q9NRJ4 1543 aa17.3■□□□□ 0.36
PRPF4-202ENST00000374199 PUS7Q96PZ0 661 aaKnown RBP17.29■□□□□ 0.36
PRPF4-202ENST00000374199 MYBBP1AQ9BQG0 1328 aaKnown RBP17.28■□□□□ 0.36
PRPF4-202ENST00000374199 C3P01024 1663 aa17.26■□□□□ 0.35
PRPF4-202ENST00000374199 CDCA8Q53HL2 280 aa17.26■□□□□ 0.35
PRPF4-202ENST00000374199 VGFO15240 615 aaPredicted RBP17.25■□□□□ 0.35
PRPF4-202ENST00000374199 PNISRQ8TF01 805 aaKnown RBP17.24■□□□□ 0.35
PRPF4-202ENST00000374199 ZBED9Q6R2W3 1325 aa17.24■□□□□ 0.35
PRPF4-202ENST00000374199 FER1L4A9Z1Z3 1794 aa17.23■□□□□ 0.35
PRPF4-202ENST00000374199 BLMP54132 1417 aaPredicted RBP17.22■□□□□ 0.35
PRPF4-202ENST00000374199 ANKRD26Q9UPS8 1709 aa17.21■□□□□ 0.35
PRPF4-202ENST00000374199 ZMYM3Q14202 1370 aa17.21■□□□□ 0.35
PRPF4-202ENST00000374199 AMER1Q5JTC6 1135 aaPredicted RBP17.21■□□□□ 0.35
PRPF4-202ENST00000374199 CPS1P31327 1500 aa17.2■□□□□ 0.34
PRPF4-202ENST00000374199 MRS2Q9HD23 443 aa17.2■□□□□ 0.34
PRPF4-202ENST00000374199 PANK3Q9H999 370 aa17.19■□□□□ 0.34
PRPF4-202ENST00000374199 NLRP1Q9C000 1473 aa17.19■□□□□ 0.34
PRPF4-202ENST00000374199 CENPJQ9HC77 1338 aaPredicted RBP17.19■□□□□ 0.34
PRPF4-202ENST00000374199 FBXO31Q5XUX0 539 aaPredicted RBP17.19■□□□□ 0.34
PRPF4-202ENST00000374199 TECPR2O15040 1411 aa17.18■□□□□ 0.34
PRPF4-202ENST00000374199 SLIT1O75093 1534 aa17.18■□□□□ 0.34
PRPF4-202ENST00000374199 YTHDC2Q9H6S0 1430 aaKnown RBP17.17■□□□□ 0.34
PRPF4-202ENST00000374199 RIMS2Q9UQ26 1411 aa17.17■□□□□ 0.34
PRPF4-202ENST00000374199 NLRP13Q86W25 1043 aa17.17■□□□□ 0.34
PRPF4-202ENST00000374199 ARHGAP23Q9P227 1491 aa17.16■□□□□ 0.34
PRPF4-202ENST00000374199 MED14O60244 1454 aa17.16■□□□□ 0.34
PRPF4-202ENST00000374199 SHPRHQ149N8 1683 aa17.15■□□□□ 0.34
PRPF4-202ENST00000374199 NINLQ9Y2I6 1382 aa17.15■□□□□ 0.34
PRPF4-202ENST00000374199 ADGRB2O60241 1585 aa17.15■□□□□ 0.34
PRPF4-202ENST00000374199 SMG6Q86US8 1419 aaKnown RBP17.14■□□□□ 0.33
PRPF4-202ENST00000374199 ZNF142P52746 1687 aaPredicted RBP17.14■□□□□ 0.33
PRPF4-202ENST00000374199 PELP1Q8IZL8 1130 aaKnown RBP17.13■□□□□ 0.33
PRPF4-202ENST00000374199 CD163L1Q9NR16 1453 aa17.12■□□□□ 0.33
PRPF4-202ENST00000374199 TNRQ92752 1358 aa17.12■□□□□ 0.33
PRPF4-202ENST00000374199 ADAMTSL3P82987 1691 aa17.11■□□□□ 0.33
PRPF4-202ENST00000374199 HNRNPUQ00839 825 aaKnown RBP eCLIP17.1■□□□□ 0.33
PRPF4-202ENST00000374199 SUPT16HQ9Y5B9 1047 aaKnown RBP17.1■□□□□ 0.33
PRPF4-202ENST00000374199 DIP2AQ14689 1571 aa17.1■□□□□ 0.33
PRPF4-202ENST00000374199 ABCC11Q96J66 1382 aa17.1■□□□□ 0.33
PRPF4-202ENST00000374199 CARD14Q9BXL6 1004 aa17.09■□□□□ 0.33
PRPF4-202ENST00000374199 TOPAZ1Q8N9V7 1692 aa17.09■□□□□ 0.33
PRPF4-202ENST00000374199 FAM135BQ49AJ0 1406 aa17.09■□□□□ 0.33
PRPF4-202ENST00000374199 KIF20BQ96Q89 1820 aa17.08■□□□□ 0.32
PRPF4-202ENST00000374199 ANKRD36BQ8N2N9 1353 aa17.08■□□□□ 0.32
PRPF4-202ENST00000374199 SIRT1Q96EB6 747 aa17.08■□□□□ 0.32
PRPF4-202ENST00000374199 TMEM2Q9UHN6 1383 aa17.07■□□□□ 0.32
PRPF4-202ENST00000374199 RIMS1Q86UR5 1692 aaKnown RBP17.07■□□□□ 0.32
PRPF4-202ENST00000374199 CHGAP10645 457 aaKnown RBP17.07■□□□□ 0.32
PRPF4-202ENST00000374199 RNF123Q5XPI4 1314 aa17.07■□□□□ 0.32
PRPF4-202ENST00000374199 ADAMTS13Q76LX8 1427 aa17.06■□□□□ 0.32
PRPF4-202ENST00000374199 TMEM132EQ6IEE7 984 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms