RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 SMG6Q86US8 1419 aaKnown RBP10.84□□□□□ -0.67
GARNL3-201ENST00000373386 RNF216Q9NWF9 866 aaPredicted RBP10.84□□□□□ -0.67
GARNL3-201ENST00000373386 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.84□□□□□ -0.67
GARNL3-201ENST00000373386 RNF17Q9BXT8 1623 aaKnown RBP10.84□□□□□ -0.67
GARNL3-201ENST00000373386 PRAG1Q86YV5 1406 aa10.84□□□□□ -0.67
GARNL3-201ENST00000373386 ZNF777Q9ULD5 760 aaPredicted RBP10.84□□□□□ -0.67
GARNL3-201ENST00000373386 ABCC1P33527 1531 aa10.83□□□□□ -0.68
GARNL3-201ENST00000373386 ZCCHC11Q5TAX3 1644 aaKnown RBP10.83□□□□□ -0.68
GARNL3-201ENST00000373386 PRDM4Q9UKN5 801 aa10.83□□□□□ -0.68
GARNL3-201ENST00000373386 MRS2Q9HD23 443 aa10.82□□□□□ -0.68
GARNL3-201ENST00000373386 PLCH2O75038 1416 aa10.82□□□□□ -0.68
GARNL3-201ENST00000373386 RTEL1-TNFRSF6BF6WH68 1400 aa10.82□□□□□ -0.68
GARNL3-201ENST00000373386 DEPDC5O75140 1603 aa10.82□□□□□ -0.68
GARNL3-201ENST00000373386 CCDC144AA2RUR9 1427 aa10.81□□□□□ -0.68
GARNL3-201ENST00000373386 CCDC184Q52MB2 194 aa10.81□□□□□ -0.68
GARNL3-201ENST00000373386 WASHC2CQ9Y4E1 1318 aa10.81□□□□□ -0.68
GARNL3-201ENST00000373386 PLA2R1Q13018 1463 aa10.81□□□□□ -0.68
GARNL3-201ENST00000373386 WDR7Q9Y4E6 1490 aa10.81□□□□□ -0.68
GARNL3-201ENST00000373386 BRD4O60885 1362 aaPredicted RBP10.81□□□□□ -0.68
GARNL3-201ENST00000373386 LRPPRCP42704 1394 aaKnown RBP10.81□□□□□ -0.68
GARNL3-201ENST00000373386 RNF123Q5XPI4 1314 aa10.8□□□□□ -0.68
GARNL3-201ENST00000373386 WWC1Q8IX03 1113 aa10.8□□□□□ -0.68
GARNL3-201ENST00000373386 FAM9BQ8IZU0 186 aa10.8□□□□□ -0.68
GARNL3-201ENST00000373386 BRPF3Q9ULD4 1205 aa10.8□□□□□ -0.68
GARNL3-201ENST00000373386 FAM43AQ8N2R8 423 aa10.8□□□□□ -0.68
GARNL3-201ENST00000373386 CFAP44Q96MT7 982 aa10.8□□□□□ -0.68
GARNL3-201ENST00000373386 NOP58Q9Y2X3 529 aaKnown RBP10.8□□□□□ -0.68
GARNL3-201ENST00000373386 RALBP1Q15311 655 aa10.79□□□□□ -0.68
GARNL3-201ENST00000373386 OSCARQ8IYS5 282 aa10.79□□□□□ -0.68
GARNL3-201ENST00000373386 PRDM10Q9NQV6 1147 aa10.79□□□□□ -0.68
GARNL3-201ENST00000373386 HNRNPMP52272 730 aaKnown RBP eCLIP10.79□□□□□ -0.68
GARNL3-201ENST00000373386 A2MP01023 1474 aa10.78□□□□□ -0.68
GARNL3-201ENST00000373386 COL17A1Q9UMD9 1497 aaPredicted RBP10.78□□□□□ -0.68
GARNL3-201ENST00000373386 PPP6R1Q9UPN7 881 aa10.78□□□□□ -0.68
GARNL3-201ENST00000373386 PLCB2Q00722 1185 aa10.78□□□□□ -0.68
GARNL3-201ENST00000373386 CARD11Q9BXL7 1154 aa10.78□□□□□ -0.68
GARNL3-201ENST00000373386 CEP152O94986 1710 aa10.77□□□□□ -0.68
GARNL3-201ENST00000373386 KIAA1210Q9ULL0 1709 aa10.77□□□□□ -0.69
GARNL3-201ENST00000373386 CLSTN1O94985 981 aa10.77□□□□□ -0.69
GARNL3-201ENST00000373386 HSP90AA1P07900 732 aaKnown RBP10.77□□□□□ -0.69
GARNL3-201ENST00000373386 TRPM2O94759 1503 aa10.77□□□□□ -0.69
GARNL3-201ENST00000373386 VWDEQ8N2E2 1590 aa10.76□□□□□ -0.69
GARNL3-201ENST00000373386 ABCA9Q8IUA7 1624 aa10.76□□□□□ -0.69
GARNL3-201ENST00000373386 PPM1GO15355 546 aaPredicted RBP10.76□□□□□ -0.69
GARNL3-201ENST00000373386 SPHKAPQ2M3C7 1700 aa10.76□□□□□ -0.69
GARNL3-201ENST00000373386 PARD3Q8TEW0 1356 aa10.76□□□□□ -0.69
GARNL3-201ENST00000373386 MYBBP1AQ9BQG0 1328 aaKnown RBP10.75□□□□□ -0.69
GARNL3-201ENST00000373386 ZFYVE16Q7Z3T8 1539 aa10.75□□□□□ -0.69
GARNL3-201ENST00000373386 TET3O43151 1660 aa10.75□□□□□ -0.69
GARNL3-201ENST00000373386 IQGAP1P46940 1657 aa10.75□□□□□ -0.69
GARNL3-201ENST00000373386 B4GALNT3Q6L9W6 998 aa10.75□□□□□ -0.69
GARNL3-201ENST00000373386 INO80Q9ULG1 1556 aaPredicted RBP10.75□□□□□ -0.69
GARNL3-201ENST00000373386 PNISRQ8TF01 805 aaKnown RBP10.75□□□□□ -0.69
GARNL3-201ENST00000373386 PTPRTO14522 1441 aa10.74□□□□□ -0.69
GARNL3-201ENST00000373386 MADDQ8WXG6 1647 aa10.74□□□□□ -0.69
GARNL3-201ENST00000373386 CENPJQ9HC77 1338 aaPredicted RBP10.74□□□□□ -0.69
GARNL3-201ENST00000373386 RGS3P49796 1198 aa10.74□□□□□ -0.69
GARNL3-201ENST00000373386 ZNF592Q92610 1267 aa10.73□□□□□ -0.69
GARNL3-201ENST00000373386 NUDCQ9Y266 331 aa10.73□□□□□ -0.69
GARNL3-201ENST00000373386 SCAPERQ9BY12 1400 aa10.73□□□□□ -0.69
GARNL3-201ENST00000373386 DCAF11Q8TEB1 546 aa10.72□□□□□ -0.69
GARNL3-201ENST00000373386 KCNG1Q9UIX4 513 aa10.72□□□□□ -0.69
GARNL3-201ENST00000373386 EFCAB2Q5VUJ9 269 aa10.72□□□□□ -0.69
GARNL3-201ENST00000373386 PUS7Q96PZ0 661 aaKnown RBP10.72□□□□□ -0.69
GARNL3-201ENST00000373386 ST20-MTHFSA0A0A6YYL1 179 aa10.71□□□□□ -0.69
GARNL3-201ENST00000373386 PTMAP06454 111 aaKnown RBP10.71□□□□□ -0.7
GARNL3-201ENST00000373386 ARID3AQ99856 593 aa10.7□□□□□ -0.7
GARNL3-201ENST00000373386 SYNMO15061 1565 aa10.7□□□□□ -0.7
GARNL3-201ENST00000373386 PDE3BQ13370 1112 aa10.7□□□□□ -0.7
GARNL3-201ENST00000373386 GRIPAP1Q4V328 841 aa10.69□□□□□ -0.7
GARNL3-201ENST00000373386 PLCD4Q9BRC7 762 aa10.69□□□□□ -0.7
GARNL3-201ENST00000373386 NLRP13Q86W25 1043 aa10.69□□□□□ -0.7
GARNL3-201ENST00000373386 BLMP54132 1417 aaPredicted RBP10.69□□□□□ -0.7
GARNL3-201ENST00000373386 PER1O15534 1290 aaPredicted RBP10.68□□□□□ -0.7
GARNL3-201ENST00000373386 LMTK2Q8IWU2 1503 aa10.68□□□□□ -0.7
GARNL3-201ENST00000373386 VGFO15240 615 aaPredicted RBP10.68□□□□□ -0.7
GARNL3-201ENST00000373386 TESK2Q96S53 571 aa10.68□□□□□ -0.7
GARNL3-201ENST00000373386 ATP7AQ04656 1500 aa10.68□□□□□ -0.7
GARNL3-201ENST00000373386 TMC1Q8TDI8 760 aa10.67□□□□□ -0.7
GARNL3-201ENST00000373386 USP35Q9P2H5 1018 aa10.67□□□□□ -0.7
GARNL3-201ENST00000373386 MYOM2P54296 1465 aa10.67□□□□□ -0.7
GARNL3-201ENST00000373386 TRAPPC8Q9Y2L5 1435 aa10.67□□□□□ -0.7
GARNL3-201ENST00000373386 NEFMP07197 916 aa10.67□□□□□ -0.7
GARNL3-201ENST00000373386 IFT172Q9UG01 1749 aa10.67□□□□□ -0.7
GARNL3-201ENST00000373386 CFAP74Q9C0B2 1584 aa10.66□□□□□ -0.7
GARNL3-201ENST00000373386 CLTCL1P53675 1640 aa10.66□□□□□ -0.7
GARNL3-201ENST00000373386 NPC1L1Q9UHC9 1359 aa10.66□□□□□ -0.7
GARNL3-201ENST00000373386 TMED8Q6PL24 325 aaPredicted RBP10.66□□□□□ -0.7
GARNL3-201ENST00000373386 PLCD3Q8N3E9 789 aa10.66□□□□□ -0.7
GARNL3-201ENST00000373386 FAM193AP78312 1265 aa10.66□□□□□ -0.7
GARNL3-201ENST00000373386 MROH1Q8NDA8 1641 aa10.66□□□□□ -0.7
GARNL3-201ENST00000373386 MYO3AQ8NEV4 1616 aa10.65□□□□□ -0.7
GARNL3-201ENST00000373386 SCAF11Q99590 1463 aaKnown RBP10.65□□□□□ -0.7
GARNL3-201ENST00000373386 CLGNO14967 610 aa10.64□□□□□ -0.71
GARNL3-201ENST00000373386 PTMSP20962 102 aa10.64□□□□□ -0.71
GARNL3-201ENST00000373386 ANP32AP39687 249 aaKnown RBP10.64□□□□□ -0.71
GARNL3-201ENST00000373386 TMF1P82094 1093 aa10.64□□□□□ -0.71
GARNL3-201ENST00000373386 RGS22Q8NE09 1264 aa10.64□□□□□ -0.71
GARNL3-201ENST00000373386 ZNF830Q96NB3 372 aaPredicted RBP10.64□□□□□ -0.71
GARNL3-201ENST00000373386 PSMD1Q99460 953 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms