RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 NOS1P29475 1434 aa14.11□□□□□ -0.15
ITM2A-201ENST00000373298 TNRQ92752 1358 aa14.1□□□□□ -0.15
ITM2A-201ENST00000373298 MYO3AQ8NEV4 1616 aa14.1□□□□□ -0.15
ITM2A-201ENST00000373298 SPHKAPQ2M3C7 1700 aa14.09□□□□□ -0.15
ITM2A-201ENST00000373298 RPRD2Q5VT52 1461 aaKnown RBP14.09□□□□□ -0.15
ITM2A-201ENST00000373298 IDI1Q13907 227 aa14.08□□□□□ -0.16
ITM2A-201ENST00000373298 PTPRTO14522 1441 aa14.08□□□□□ -0.16
ITM2A-201ENST00000373298 LMTK3Q96Q04 1460 aa14.07□□□□□ -0.16
ITM2A-201ENST00000373298 DHX57Q6P158 1386 aaKnown RBP14.06□□□□□ -0.16
ITM2A-201ENST00000373298 CLTCL1P53675 1640 aa14.06□□□□□ -0.16
ITM2A-201ENST00000373298 HSPA2P54652 639 aa14.06□□□□□ -0.16
ITM2A-201ENST00000373298 PIK3C2BO00750 1634 aa14.05□□□□□ -0.16
ITM2A-201ENST00000373298 MYO5BQ9ULV0 1848 aa14.05□□□□□ -0.16
ITM2A-201ENST00000373298 TRPM2O94759 1503 aa14.04□□□□□ -0.16
ITM2A-201ENST00000373298 CEP170BQ9Y4F5 1589 aaPredicted RBP14.04□□□□□ -0.16
ITM2A-201ENST00000373298 SPDYE2BA6NHP3 402 aa14.04□□□□□ -0.16
ITM2A-201ENST00000373298 SPDYE6P0CI01 402 aa14.04□□□□□ -0.16
ITM2A-201ENST00000373298 SPDYE2Q495Y8 402 aa14.04□□□□□ -0.16
ITM2A-201ENST00000373298 ANKRD30BQ9BXX2 1392 aa14.03□□□□□ -0.16
ITM2A-201ENST00000373298 UHRF1BP1Q6BDS2 1440 aa14.03□□□□□ -0.16
ITM2A-201ENST00000373298 ZNF142P52746 1687 aaPredicted RBP14.03□□□□□ -0.16
ITM2A-201ENST00000373298 UBR1Q8IWV7 1749 aa14.02□□□□□ -0.16
ITM2A-201ENST00000373298 EVX2Q03828 476 aa14.02□□□□□ -0.16
ITM2A-201ENST00000373298 A2ML1A8K2U0 1454 aa14.01□□□□□ -0.17
ITM2A-201ENST00000373298 NLRP1Q9C000 1473 aa14.01□□□□□ -0.17
ITM2A-201ENST00000373298 TMEM131LA2VDJ0 1609 aa14□□□□□ -0.17
ITM2A-201ENST00000373298 ACIN1Q9UKV3 1341 aaKnown RBP13.99□□□□□ -0.17
ITM2A-201ENST00000373298 SLC52A1Q9NWF4 448 aa13.99□□□□□ -0.17
ITM2A-201ENST00000373298 CHGAP10645 457 aaKnown RBP13.98□□□□□ -0.17
ITM2A-201ENST00000373298 SIN3AQ96ST3 1273 aa13.98□□□□□ -0.17
ITM2A-201ENST00000373298 ADGRB3O60242 1522 aa13.98□□□□□ -0.17
ITM2A-201ENST00000373298 CCDC144AA2RUR9 1427 aa13.96□□□□□ -0.17
ITM2A-201ENST00000373298 KIF1BO60333 1816 aa13.96□□□□□ -0.17
ITM2A-201ENST00000373298 NUTM2DQ5VT03 806 aaPredicted RBP13.96□□□□□ -0.17
ITM2A-201ENST00000373298 STRCQ7RTU9 1775 aa13.95□□□□□ -0.18
ITM2A-201ENST00000373298 LTKP29376 864 aa13.94□□□□□ -0.18
ITM2A-201ENST00000373298 STAG3Q9UJ98 1225 aa13.94□□□□□ -0.18
ITM2A-201ENST00000373298 SPATA31E1Q6ZUB1 1445 aa13.94□□□□□ -0.18
ITM2A-201ENST00000373298 NCKAP5LQ9HCH0 1330 aa13.94□□□□□ -0.18
ITM2A-201ENST00000373298 RGL3Q3MIN7 710 aa13.93□□□□□ -0.18
ITM2A-201ENST00000373298 KDM5AP29375 1690 aaKnown RBP13.93□□□□□ -0.18
ITM2A-201ENST00000373298 NEUROD1Q13562 356 aa13.92□□□□□ -0.18
ITM2A-201ENST00000373298 THEMISQ8N1K5 641 aaPredicted RBP13.92□□□□□ -0.18
ITM2A-201ENST00000373298 TMEM2Q9UHN6 1383 aa13.92□□□□□ -0.18
ITM2A-201ENST00000373298 ARHGAP23Q9P227 1491 aa13.92□□□□□ -0.18
ITM2A-201ENST00000373298 ZFYVE9O95405 1425 aa13.91□□□□□ -0.18
ITM2A-201ENST00000373298 NEURL4Q96JN8 1562 aa13.91□□□□□ -0.18
ITM2A-201ENST00000373298 SLIT1O75093 1534 aa13.91□□□□□ -0.18
ITM2A-201ENST00000373298 ZNF326Q5BKZ1 582 aaKnown RBP13.9□□□□□ -0.18
ITM2A-201ENST00000373298 NEXMIFQ5QGS0 1516 aa13.9□□□□□ -0.18
ITM2A-201ENST00000373298 RIMS2Q9UQ26 1411 aa13.89□□□□□ -0.19
ITM2A-201ENST00000373298 POLR1AO95602 1720 aaPredicted RBP13.89□□□□□ -0.19
ITM2A-201ENST00000373298 PPLO60437 1756 aa13.88□□□□□ -0.19
ITM2A-201ENST00000373298 TXNDC2Q86VQ3 553 aa13.88□□□□□ -0.19
ITM2A-201ENST00000373298 CCER1Q8TC90 406 aaPredicted RBP13.88□□□□□ -0.19
ITM2A-201ENST00000373298 IFT172Q9UG01 1749 aa13.88□□□□□ -0.19
ITM2A-201ENST00000373298 MKRN4PQ13434 485 aaPredicted RBP13.87□□□□□ -0.19
ITM2A-201ENST00000373298 PRKAR2AP13861 404 aaKnown RBP13.86□□□□□ -0.19
ITM2A-201ENST00000373298 SPDYE1Q8NFV5 336 aaPredicted RBP13.86□□□□□ -0.19
ITM2A-201ENST00000373298 SCAF11Q99590 1463 aaKnown RBP13.86□□□□□ -0.19
ITM2A-201ENST00000373298 ANKLE2Q86XL3 938 aa13.86□□□□□ -0.19
ITM2A-201ENST00000373298 ADGRF5Q8IZF2 1346 aa13.85□□□□□ -0.19
ITM2A-201ENST00000373298 NRXN3Q9Y4C0 1643 aa13.83□□□□□ -0.2
ITM2A-201ENST00000373298 L3MBTL2Q969R5 705 aa13.83□□□□□ -0.2
ITM2A-201ENST00000373298 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.2
ITM2A-201ENST00000373298 SSUH2Q9Y2M2 353 aa13.83□□□□□ -0.2
ITM2A-201ENST00000373298 IQGAP1P46940 1657 aa13.83□□□□□ -0.2
ITM2A-201ENST00000373298 DCAF11Q8TEB1 546 aa13.82□□□□□ -0.2
ITM2A-201ENST00000373298 SLC26A8Q96RN1 970 aa13.82□□□□□ -0.2
ITM2A-201ENST00000373298 EID1Q9Y6B2 187 aa13.82□□□□□ -0.2
ITM2A-201ENST00000373298 NPHP4O75161 1426 aaPredicted RBP13.82□□□□□ -0.2
ITM2A-201ENST00000373298 MED14O60244 1454 aa13.82□□□□□ -0.2
ITM2A-201ENST00000373298 C19orf67A6NJJ6 358 aa13.82□□□□□ -0.2
ITM2A-201ENST00000373298 PPP1R15AO75807 674 aaPredicted RBP13.82□□□□□ -0.2
ITM2A-201ENST00000373298 CLEC11AQ9Y240 323 aa13.81□□□□□ -0.2
ITM2A-201ENST00000373298 ADAMTS13Q76LX8 1427 aa13.8□□□□□ -0.2
ITM2A-201ENST00000373298 PLEKHG1Q9ULL1 1385 aa13.79□□□□□ -0.2
ITM2A-201ENST00000373298 RPGRIP1LQ68CZ1 1315 aa13.79□□□□□ -0.2
ITM2A-201ENST00000373298 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.79□□□□□ -0.2
ITM2A-201ENST00000373298 NRXN1Q9ULB1 1477 aa13.78□□□□□ -0.2
ITM2A-201ENST00000373298 SETD1AO15047 1707 aaKnown RBP13.78□□□□□ -0.2
ITM2A-201ENST00000373298 BCANQ96GW7 911 aa13.78□□□□□ -0.2
ITM2A-201ENST00000373298 ZNF692Q9BU19 519 aaPredicted RBP13.78□□□□□ -0.2
ITM2A-201ENST00000373298 STRCP1A6NGW2 1772 aa13.77□□□□□ -0.2
ITM2A-201ENST00000373298 VGFO15240 615 aaPredicted RBP13.77□□□□□ -0.21
ITM2A-201ENST00000373298 MYOM2P54296 1465 aa13.77□□□□□ -0.21
ITM2A-201ENST00000373298 PIK3C2GO75747 1445 aa13.77□□□□□ -0.21
ITM2A-201ENST00000373298 SETBP1Q9Y6X0 1596 aa13.76□□□□□ -0.21
ITM2A-201ENST00000373298 CLSPNQ9HAW4 1339 aa13.76□□□□□ -0.21
ITM2A-201ENST00000373298 METP08581 1390 aa13.76□□□□□ -0.21
ITM2A-201ENST00000373298 ZNF335Q9H4Z2 1342 aaPredicted RBP13.76□□□□□ -0.21
ITM2A-201ENST00000373298 ALKQ9UM73 1620 aa13.75□□□□□ -0.21
ITM2A-201ENST00000373298 TONSLQ96HA7 1378 aa13.75□□□□□ -0.21
ITM2A-201ENST00000373298 ASXL1Q8IXJ9 1541 aa13.75□□□□□ -0.21
ITM2A-201ENST00000373298 HDGFP51858 240 aaKnown RBP13.75□□□□□ -0.21
ITM2A-201ENST00000373298 NBPF8Q3BBV2 869 aa13.75□□□□□ -0.21
ITM2A-201ENST00000373298 CFAP70Q5T0N1 1121 aa13.75□□□□□ -0.21
ITM2A-201ENST00000373298 PRAG1Q86YV5 1406 aa13.74□□□□□ -0.21
ITM2A-201ENST00000373298 PTPRUQ92729 1446 aa13.73□□□□□ -0.21
ITM2A-201ENST00000373298 TMEM132EQ6IEE7 984 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms