RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 HAP1P54257 671 aaPredicted RBP9.2□□□□□ -0.94
TGFBR3-202ENST00000370399 RRP1P56182 461 aaKnown RBP9.2□□□□□ -0.94
TGFBR3-202ENST00000370399 UPF2Q9HAU5 1272 aaKnown RBP9.2□□□□□ -0.94
TGFBR3-202ENST00000370399 ABCC2Q92887 1545 aa9.2□□□□□ -0.94
TGFBR3-202ENST00000370399 WAPLQ7Z5K2 1190 aa9.19□□□□□ -0.94
TGFBR3-202ENST00000370399 CABP1Q9NZU7 370 aa9.19□□□□□ -0.94
TGFBR3-202ENST00000370399 DISP3Q9P2K9 1392 aa9.19□□□□□ -0.94
TGFBR3-202ENST00000370399 DNMT1P26358 1616 aaKnown RBP9.19□□□□□ -0.94
TGFBR3-202ENST00000370399 ITSN2Q9NZM3 1697 aa9.18□□□□□ -0.94
TGFBR3-202ENST00000370399 HMOX1P09601 288 aa9.18□□□□□ -0.94
TGFBR3-202ENST00000370399 PNNQ9H307 717 aaKnown RBP9.18□□□□□ -0.94
TGFBR3-202ENST00000370399 FAM135AQ9P2D6 1515 aa9.18□□□□□ -0.94
TGFBR3-202ENST00000370399 ERCC6L2Q5T890 1561 aa9.18□□□□□ -0.94
TGFBR3-202ENST00000370399 ERICH6BQ5W0A0 696 aa9.18□□□□□ -0.94
TGFBR3-202ENST00000370399 CRBNQ96SW2 442 aa9.18□□□□□ -0.94
TGFBR3-202ENST00000370399 TCERG1O14776 1098 aaKnown RBP9.18□□□□□ -0.94
TGFBR3-202ENST00000370399 NUTM2GQ5VZR2 741 aa9.17□□□□□ -0.94
TGFBR3-202ENST00000370399 COG3Q96JB2 828 aa9.17□□□□□ -0.94
TGFBR3-202ENST00000370399 SMC4Q9NTJ3 1288 aa9.17□□□□□ -0.94
TGFBR3-202ENST00000370399 CDK19Q9BWU1 502 aa9.17□□□□□ -0.94
TGFBR3-202ENST00000370399 KDM5BQ9UGL1 1544 aa9.17□□□□□ -0.94
TGFBR3-202ENST00000370399 DENND4BO75064 1496 aaPredicted RBP9.17□□□□□ -0.94
TGFBR3-202ENST00000370399 MYH16Q9H6N6 1097 aa9.17□□□□□ -0.94
TGFBR3-202ENST00000370399 NOS1P29475 1434 aa9.16□□□□□ -0.94
TGFBR3-202ENST00000370399 ABCC10Q5T3U5 1492 aa9.16□□□□□ -0.94
TGFBR3-202ENST00000370399 AMPHP49418 695 aa9.16□□□□□ -0.94
TGFBR3-202ENST00000370399 PMFBP1Q8TBY8 1022 aa9.16□□□□□ -0.94
TGFBR3-202ENST00000370399 TESK2Q96S53 571 aa9.16□□□□□ -0.94
TGFBR3-202ENST00000370399 MBD5Q9P267 1494 aa9.16□□□□□ -0.94
TGFBR3-202ENST00000370399 TCP11L2Q8N4U5 519 aa9.16□□□□□ -0.94
TGFBR3-202ENST00000370399 COG6Q9Y2V7 657 aa9.16□□□□□ -0.94
TGFBR3-202ENST00000370399 DIAPH1O60610 1272 aaKnown RBP9.15□□□□□ -0.94
TGFBR3-202ENST00000370399 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.15□□□□□ -0.94
TGFBR3-202ENST00000370399 ITPRIPQ8IWB1 547 aa9.15□□□□□ -0.94
TGFBR3-202ENST00000370399 ABCA8O94911 1581 aa9.15□□□□□ -0.94
TGFBR3-202ENST00000370399 HSP90AA1P07900 732 aaKnown RBP9.15□□□□□ -0.95
TGFBR3-202ENST00000370399 RTF1Q92541 710 aaKnown RBP9.15□□□□□ -0.95
TGFBR3-202ENST00000370399 PRAG1Q86YV5 1406 aa9.14□□□□□ -0.95
TGFBR3-202ENST00000370399 E9PSI1 815 aa9.14□□□□□ -0.95
TGFBR3-202ENST00000370399 APBB1O00213 710 aa9.14□□□□□ -0.95
TGFBR3-202ENST00000370399 RIPK4P57078 832 aa9.14□□□□□ -0.95
TGFBR3-202ENST00000370399 DUOX2Q9NRD8 1548 aa9.14□□□□□ -0.95
TGFBR3-202ENST00000370399 RBM33Q96EV2 1170 aaKnown RBP9.14□□□□□ -0.95
TGFBR3-202ENST00000370399 ADGRL2O95490 1459 aa9.13□□□□□ -0.95
TGFBR3-202ENST00000370399 ARXQ96QS3 562 aa9.13□□□□□ -0.95
TGFBR3-202ENST00000370399 A2MP01023 1474 aa9.13□□□□□ -0.95
TGFBR3-202ENST00000370399 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.13□□□□□ -0.95
TGFBR3-202ENST00000370399 RPGRIP1LQ68CZ1 1315 aa9.13□□□□□ -0.95
TGFBR3-202ENST00000370399 FBLN1P23142 703 aa9.13□□□□□ -0.95
TGFBR3-202ENST00000370399 RUNDC1Q96C34 613 aa9.13□□□□□ -0.95
TGFBR3-202ENST00000370399 TEX14Q8IWB6 1497 aa9.13□□□□□ -0.95
TGFBR3-202ENST00000370399 SHANK2Q9UPX8 1470 aa9.13□□□□□ -0.95
TGFBR3-202ENST00000370399 C14orf93Q9H972 538 aaKnown RBP9.13□□□□□ -0.95
TGFBR3-202ENST00000370399 NSD3Q9BZ95 1437 aa9.11□□□□□ -0.95
TGFBR3-202ENST00000370399 ZNF518AQ6AHZ1 1483 aa9.11□□□□□ -0.95
TGFBR3-202ENST00000370399 BCAR3O75815 825 aa9.11□□□□□ -0.95
TGFBR3-202ENST00000370399 PANK1Q8TE04 598 aa9.11□□□□□ -0.95
TGFBR3-202ENST00000370399 RALGAPBQ86X10 1494 aa9.11□□□□□ -0.95
TGFBR3-202ENST00000370399 CHD1O14646 1710 aa9.1□□□□□ -0.95
TGFBR3-202ENST00000370399 MS4A1P11836 297 aa9.1□□□□□ -0.95
TGFBR3-202ENST00000370399 RRS1Q15050 365 aaKnown RBP9.1□□□□□ -0.95
TGFBR3-202ENST00000370399 TSR2Q969E8 191 aaKnown RBP9.1□□□□□ -0.95
TGFBR3-202ENST00000370399 CFAP65Q6ZU64 1925 aaKnown RBP9.09□□□□□ -0.95
TGFBR3-202ENST00000370399 SCAF11Q99590 1463 aaKnown RBP9.09□□□□□ -0.95
TGFBR3-202ENST00000370399 IPO8O15397 1037 aaKnown RBP9.09□□□□□ -0.95
TGFBR3-202ENST00000370399 PER1O15534 1290 aaPredicted RBP9.09□□□□□ -0.95
TGFBR3-202ENST00000370399 PRKAR2BP31323 418 aa9.09□□□□□ -0.95
TGFBR3-202ENST00000370399 NLRP6P59044 892 aa9.09□□□□□ -0.95
TGFBR3-202ENST00000370399 AMER1Q5JTC6 1135 aaPredicted RBP9.09□□□□□ -0.95
TGFBR3-202ENST00000370399 SLC4A10Q6U841 1118 aa9.09□□□□□ -0.95
TGFBR3-202ENST00000370399 CSB-PGBD3P0DP91 1061 aa9.09□□□□□ -0.96
TGFBR3-202ENST00000370399 ANP32EQ9BTT0 268 aa9.08□□□□□ -0.96
TGFBR3-202ENST00000370399 NOP58Q9Y2X3 529 aaKnown RBP9.08□□□□□ -0.96
TGFBR3-202ENST00000370399 TTC37Q6PGP7 1564 aa9.08□□□□□ -0.96
TGFBR3-202ENST00000370399 PSME1Q06323 249 aa9.07□□□□□ -0.96
TGFBR3-202ENST00000370399 THEMISQ8N1K5 641 aaPredicted RBP9.07□□□□□ -0.96
TGFBR3-202ENST00000370399 NECTIN2Q92692 538 aa9.07□□□□□ -0.96
TGFBR3-202ENST00000370399 ARHGEF12Q9NZN5 1544 aa9.07□□□□□ -0.96
TGFBR3-202ENST00000370399 SAMD9LQ8IVG5 1584 aa9.07□□□□□ -0.96
TGFBR3-202ENST00000370399 RTEL1-TNFRSF6BF6WH68 1400 aa9.07□□□□□ -0.96
TGFBR3-202ENST00000370399 CALD1Q05682 793 aaKnown RBP9.07□□□□□ -0.96
TGFBR3-202ENST00000370399 NUDT16Q96DE0 195 aaKnown RBP9.07□□□□□ -0.96
TGFBR3-202ENST00000370399 CARD14Q9BXL6 1004 aa9.07□□□□□ -0.96
TGFBR3-202ENST00000370399 SKAP1Q86WV1 359 aa9.07□□□□□ -0.96
TGFBR3-202ENST00000370399 CCDC61Q9Y6R9 512 aa9.07□□□□□ -0.96
TGFBR3-202ENST00000370399 NME9Q86XW9 330 aa9.06□□□□□ -0.96
TGFBR3-202ENST00000370399 RWDD1Q9H446 243 aaPredicted RBP9.06□□□□□ -0.96
TGFBR3-202ENST00000370399 C20orf194Q5TEA3 1177 aa9.06□□□□□ -0.96
TGFBR3-202ENST00000370399 ZKSCAN2Q63HK3 967 aa9.06□□□□□ -0.96
TGFBR3-202ENST00000370399 SPRYD3Q8NCJ5 442 aa9.06□□□□□ -0.96
TGFBR3-202ENST00000370399 EXOSC9Q06265 439 aaKnown RBP9.05□□□□□ -0.96
TGFBR3-202ENST00000370399 ABTB2Q8N961 1025 aa9.05□□□□□ -0.96
TGFBR3-202ENST00000370399 THUMPD2Q9BTF0 503 aaKnown RBP9.05□□□□□ -0.96
TGFBR3-202ENST00000370399 GCC2Q8IWJ2 1684 aa9.05□□□□□ -0.96
TGFBR3-202ENST00000370399 PDE4AP27815 886 aa9.05□□□□□ -0.96
TGFBR3-202ENST00000370399 SPATA31E1Q6ZUB1 1445 aa9.05□□□□□ -0.96
TGFBR3-202ENST00000370399 WWC1Q8IX03 1113 aa9.05□□□□□ -0.96
TGFBR3-202ENST00000370399 XPCQ01831 940 aaPredicted RBP9.05□□□□□ -0.96
TGFBR3-202ENST00000370399 ESCO1Q5FWF5 840 aa9.04□□□□□ -0.96
TGFBR3-202ENST00000370399 LRRIQ1Q96JM4 1722 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms