RNA–Protein interactions for RNA: ENST00000366517.5

SMYD3-202, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-202ENST00000366517 PCDHB8Q9UN66 801 aa12.11□□□□□ -0.47
SMYD3-202ENST00000366517 UPF1Q92900 1129 aaKnown RBP eCLIP12.1□□□□□ -0.471e-7■■□□□ 13.1
SMYD3-202ENST00000366517 SAMD9LQ8IVG5 1584 aa12.1□□□□□ -0.47
SMYD3-202ENST00000366517 NPHP4O75161 1426 aaPredicted RBP12.1□□□□□ -0.47
SMYD3-202ENST00000366517 A2MP01023 1474 aa12.08□□□□□ -0.48
SMYD3-202ENST00000366517 STRCP1A6NGW2 1772 aa12.08□□□□□ -0.48
SMYD3-202ENST00000366517 TAOK2Q9UL54 1235 aa12.07□□□□□ -0.48
SMYD3-202ENST00000366517 ATP1B4Q9UN42 357 aaPredicted RBP12.07□□□□□ -0.48
SMYD3-202ENST00000366517 SPAG9O60271 1321 aaKnown RBP12.07□□□□□ -0.48
SMYD3-202ENST00000366517 NLRP1Q9C000 1473 aa12.07□□□□□ -0.48
SMYD3-202ENST00000366517 IQGAP1P46940 1657 aa12.07□□□□□ -0.48
SMYD3-202ENST00000366517 RIOK3O14730 519 aaKnown RBP12.06□□□□□ -0.48
SMYD3-202ENST00000366517 TNRQ92752 1358 aa12.06□□□□□ -0.48
SMYD3-202ENST00000366517 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.06□□□□□ -0.48
SMYD3-202ENST00000366517 CCDC18Q5T9S5 1454 aa12.06□□□□□ -0.48
SMYD3-202ENST00000366517 FAM135AQ9P2D6 1515 aa12.06□□□□□ -0.48
SMYD3-202ENST00000366517 SETD1AO15047 1707 aaKnown RBP12.06□□□□□ -0.48
SMYD3-202ENST00000366517 CASKIN1Q8WXD9 1431 aa12.06□□□□□ -0.48
SMYD3-202ENST00000366517 GGT6Q6P531 493 aa12.05□□□□□ -0.48
SMYD3-202ENST00000366517 ATP7AQ04656 1500 aa12.04□□□□□ -0.48
SMYD3-202ENST00000366517 PZPP20742 1482 aa12.04□□□□□ -0.48
SMYD3-202ENST00000366517 KIAA1107Q9UPP5 1409 aa12.04□□□□□ -0.48
SMYD3-202ENST00000366517 INO80Q9ULG1 1556 aaPredicted RBP12.03□□□□□ -0.48
SMYD3-202ENST00000366517 UGGT1Q9NYU2 1555 aa12.03□□□□□ -0.48
SMYD3-202ENST00000366517 CDC42BPAQ5VT25 1732 aa12.02□□□□□ -0.48
SMYD3-202ENST00000366517 ADGBQ8N7X0 1667 aa12.02□□□□□ -0.49
SMYD3-202ENST00000366517 RGL2O15211 777 aa12.02□□□□□ -0.49
SMYD3-202ENST00000366517 PRKCSHP14314 528 aaPredicted RBP12.02□□□□□ -0.49
SMYD3-202ENST00000366517 PDAP1Q13442 181 aaKnown RBP12.02□□□□□ -0.49
SMYD3-202ENST00000366517 KDM5DQ9BY66 1539 aa12.02□□□□□ -0.49
SMYD3-202ENST00000366517 MIA2Q96PC5 1412 aa12.01□□□□□ -0.49
SMYD3-202ENST00000366517 PSEN1P49768 467 aa12.01□□□□□ -0.49
SMYD3-202ENST00000366517 TMEM106CQ9BVX2 250 aa12.01□□□□□ -0.49
SMYD3-202ENST00000366517 PLEKHH2Q8IVE3 1493 aa12.01□□□□□ -0.49
SMYD3-202ENST00000366517 FYCO1Q9BQS8 1478 aa12.01□□□□□ -0.49
SMYD3-202ENST00000366517 VGFO15240 615 aaPredicted RBP12□□□□□ -0.49
SMYD3-202ENST00000366517 TIE1P35590 1138 aa12□□□□□ -0.49
SMYD3-202ENST00000366517 XIRP1Q702N8 1843 aaKnown RBP12□□□□□ -0.49
SMYD3-202ENST00000366517 RNF25Q96BH1 459 aaPredicted RBP11.99□□□□□ -0.49
SMYD3-202ENST00000366517 TRPC6Q9Y210 931 aa11.99□□□□□ -0.49
SMYD3-202ENST00000366517 ZC3H13Q5T200 1668 aaKnown RBP11.99□□□□□ -0.49
SMYD3-202ENST00000366517 FBXO31Q5XUX0 539 aaPredicted RBP11.98□□□□□ -0.49
SMYD3-202ENST00000366517 ZNF772Q68DY9 489 aaPredicted RBP11.98□□□□□ -0.49
SMYD3-202ENST00000366517 SYCP2Q9BX26 1530 aa11.98□□□□□ -0.49
SMYD3-202ENST00000366517 CDK12Q9NYV4 1490 aaPredicted RBP11.98□□□□□ -0.49
SMYD3-202ENST00000366517 GOLGA2Q08379 1002 aa11.97□□□□□ -0.49
SMYD3-202ENST00000366517 BMP2KQ9NSY1 1161 aaPredicted RBP11.97□□□□□ -0.49
SMYD3-202ENST00000366517 JCADQ9P266 1359 aa11.96□□□□□ -0.49
SMYD3-202ENST00000366517 LRRIQ1Q96JM4 1722 aa11.96□□□□□ -0.49
SMYD3-202ENST00000366517 LRRC9Q6ZRR7 1453 aa11.96□□□□□ -0.5
SMYD3-202ENST00000366517 RTEL1-TNFRSF6BF6WH68 1400 aa11.96□□□□□ -0.5
SMYD3-202ENST00000366517 TTLL13PA6NNM8 815 aa11.95□□□□□ -0.5
SMYD3-202ENST00000366517 HNRNPMP52272 730 aaKnown RBP eCLIP11.95□□□□□ -0.59e-7■■■■□ 20.4
SMYD3-202ENST00000366517 DHX29Q7Z478 1369 aaKnown RBP11.95□□□□□ -0.5
SMYD3-202ENST00000366517 ROBO1Q9Y6N7 1651 aa11.94□□□□□ -0.5
SMYD3-202ENST00000366517 GPATCH8Q9UKJ3 1502 aaKnown RBP11.94□□□□□ -0.5
SMYD3-202ENST00000366517 ATMINO43313 823 aaPredicted RBP11.93□□□□□ -0.5
SMYD3-202ENST00000366517 HAP1P54257 671 aaPredicted RBP11.93□□□□□ -0.5
SMYD3-202ENST00000366517 SPATA31A6Q5VVP1 1343 aa11.93□□□□□ -0.5
SMYD3-202ENST00000366517 ASTLQ6HA08 431 aaPredicted RBP11.92□□□□□ -0.5
SMYD3-202ENST00000366517 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.92□□□□□ -0.5
SMYD3-202ENST00000366517 ZFP91Q96JP5 570 aaPredicted RBP11.92□□□□□ -0.5
SMYD3-202ENST00000366517 WASHC2CQ9Y4E1 1318 aa11.91□□□□□ -0.5
SMYD3-202ENST00000366517 SCAF11Q99590 1463 aaKnown RBP11.91□□□□□ -0.5
SMYD3-202ENST00000366517 RXRBP28702 533 aa11.91□□□□□ -0.5
SMYD3-202ENST00000366517 ATN1P54259 1190 aaPredicted RBP11.91□□□□□ -0.5
SMYD3-202ENST00000366517 ZNF777Q9ULD5 760 aaPredicted RBP11.91□□□□□ -0.5
SMYD3-202ENST00000366517 FGD6Q6ZV73 1430 aa11.91□□□□□ -0.5
SMYD3-202ENST00000366517 STK25O00506 426 aa11.9□□□□□ -0.5
SMYD3-202ENST00000366517 CFDP1Q9UEE9 299 aaPredicted RBP11.9□□□□□ -0.5
SMYD3-202ENST00000366517 TRIM35Q9UPQ4 493 aa11.9□□□□□ -0.5
SMYD3-202ENST00000366517 ARHGAP23Q9P227 1491 aa11.89□□□□□ -0.51
SMYD3-202ENST00000366517 POTEIP0CG38 1075 aa11.89□□□□□ -0.51
SMYD3-202ENST00000366517 SLIT1O75093 1534 aa11.88□□□□□ -0.51
SMYD3-202ENST00000366517 MTUS2Q5JR59 1369 aa11.88□□□□□ -0.51
SMYD3-202ENST00000366517 CCNB3Q8WWL7 1395 aa11.88□□□□□ -0.51
SMYD3-202ENST00000366517 TRIM52Q96A61 297 aa11.88□□□□□ -0.51
SMYD3-202ENST00000366517 PHLPP1O60346 1717 aa11.88□□□□□ -0.51
SMYD3-202ENST00000366517 KIF3BO15066 747 aa11.87□□□□□ -0.51
SMYD3-202ENST00000366517 MKRN3Q13064 507 aaKnown RBP11.87□□□□□ -0.51
SMYD3-202ENST00000366517 CABP2Q9NPB3 220 aa11.87□□□□□ -0.51
SMYD3-202ENST00000366517 STK24Q9Y6E0 443 aa11.87□□□□□ -0.51
SMYD3-202ENST00000366517 TMEM94Q12767 1356 aa11.87□□□□□ -0.51
SMYD3-202ENST00000366517 UBR1Q8IWV7 1749 aa11.86□□□□□ -0.51
SMYD3-202ENST00000366517 ABCC3O15438 1527 aa11.86□□□□□ -0.51
SMYD3-202ENST00000366517 MAP3K1Q13233 1512 aa11.86□□□□□ -0.51
SMYD3-202ENST00000366517 CHGAP10645 457 aaKnown RBP11.86□□□□□ -0.51
SMYD3-202ENST00000366517 KCNA6P17658 529 aa11.86□□□□□ -0.51
SMYD3-202ENST00000366517 VSIG10Q8N0Z9 540 aa11.86□□□□□ -0.51
SMYD3-202ENST00000366517 BCL11BQ9C0K0 894 aaPredicted RBP11.86□□□□□ -0.51
SMYD3-202ENST00000366517 MBD5Q9P267 1494 aa11.85□□□□□ -0.51
SMYD3-202ENST00000366517 LTKP29376 864 aa11.85□□□□□ -0.51
SMYD3-202ENST00000366517 SLC39A7Q92504 469 aa11.85□□□□□ -0.51
SMYD3-202ENST00000366517 SLAIN2Q9P270 581 aa11.85□□□□□ -0.51
SMYD3-202ENST00000366517 CEP162Q5TB80 1403 aa11.85□□□□□ -0.51
SMYD3-202ENST00000366517 COL16A1Q07092 1604 aaPredicted RBP11.84□□□□□ -0.51
SMYD3-202ENST00000366517 RSPH4AQ5TD94 716 aa11.84□□□□□ -0.51
SMYD3-202ENST00000366517 TXNDC2Q86VQ3 553 aa11.84□□□□□ -0.51
SMYD3-202ENST00000366517 PRDM15P57071 1507 aaPredicted RBP11.84□□□□□ -0.51
SMYD3-202ENST00000366517 LRP6O75581 1613 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms