RNA–Protein interactions for RNA: ENST00000357881.8

RFX4-202, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 2,565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-202ENST00000357881 PLEKHH2Q8IVE3 1493 aa11.77□□□□□ -0.53
RFX4-202ENST00000357881 RGS3P49796 1198 aa11.76□□□□□ -0.53
RFX4-202ENST00000357881 INO80Q9ULG1 1556 aaPredicted RBP11.76□□□□□ -0.53
RFX4-202ENST00000357881 FTSJ3Q8IY81 847 aaKnown RBP11.76□□□□□ -0.53
RFX4-202ENST00000357881 LRRC9Q6ZRR7 1453 aa11.76□□□□□ -0.53
RFX4-202ENST00000357881 NLRP1Q9C000 1473 aa11.76□□□□□ -0.53
RFX4-202ENST00000357881 FMN1Q68DA7 1419 aa11.75□□□□□ -0.53
RFX4-202ENST00000357881 PAK3O75914 559 aaPredicted RBP11.75□□□□□ -0.53
RFX4-202ENST00000357881 WASHC2AQ641Q2 1341 aa11.75□□□□□ -0.53
RFX4-202ENST00000357881 SAMD9LQ8IVG5 1584 aa11.74□□□□□ -0.53
RFX4-202ENST00000357881 KDM5DQ9BY66 1539 aa11.74□□□□□ -0.53
RFX4-202ENST00000357881 NCKAP5LQ9HCH0 1330 aa11.74□□□□□ -0.53
RFX4-202ENST00000357881 CDK12Q9NYV4 1490 aaPredicted RBP11.73□□□□□ -0.53
RFX4-202ENST00000357881 CALD1Q05682 793 aaKnown RBP11.73□□□□□ -0.53
RFX4-202ENST00000357881 CNPY4Q8N129 248 aa11.73□□□□□ -0.53
RFX4-202ENST00000357881 CNGB1Q14028 1251 aaPredicted RBP11.72□□□□□ -0.53
RFX4-202ENST00000357881 FAM43AQ8N2R8 423 aa11.72□□□□□ -0.53
RFX4-202ENST00000357881 FAM135BQ49AJ0 1406 aa11.71□□□□□ -0.53
RFX4-202ENST00000357881 KIAA1107Q9UPP5 1409 aa11.7□□□□□ -0.54
RFX4-202ENST00000357881 ATP7AQ04656 1500 aa11.7□□□□□ -0.54
RFX4-202ENST00000357881 CDC42BPAQ5VT25 1732 aa11.7□□□□□ -0.54
RFX4-202ENST00000357881 LRRC7Q96NW7 1537 aa11.7□□□□□ -0.54
RFX4-202ENST00000357881 CCDC18Q5T9S5 1454 aa11.7□□□□□ -0.54
RFX4-202ENST00000357881 ZC3H13Q5T200 1668 aaKnown RBP11.7□□□□□ -0.54
RFX4-202ENST00000357881 PZPP20742 1482 aa11.69□□□□□ -0.54
RFX4-202ENST00000357881 NPHP4O75161 1426 aaPredicted RBP11.69□□□□□ -0.54
RFX4-202ENST00000357881 RNF216Q9NWF9 866 aaPredicted RBP11.68□□□□□ -0.54
RFX4-202ENST00000357881 A2MP01023 1474 aa11.68□□□□□ -0.54
RFX4-202ENST00000357881 SETD1AO15047 1707 aaKnown RBP11.67□□□□□ -0.54
RFX4-202ENST00000357881 HSP90AA1P07900 732 aaKnown RBP11.67□□□□□ -0.54
RFX4-202ENST00000357881 STRCP1A6NGW2 1772 aa11.66□□□□□ -0.54
RFX4-202ENST00000357881 KDM5AP29375 1690 aaKnown RBP11.66□□□□□ -0.54
RFX4-202ENST00000357881 NEFMP07197 916 aa11.66□□□□□ -0.54
RFX4-202ENST00000357881 PLCD3Q8N3E9 789 aa11.66□□□□□ -0.54
RFX4-202ENST00000357881 KCNG1Q9UIX4 513 aa11.66□□□□□ -0.54
RFX4-202ENST00000357881 RGS17Q9UGC6 210 aaPredicted RBP11.65□□□□□ -0.54
RFX4-202ENST00000357881 XIRP1Q702N8 1843 aaKnown RBP11.65□□□□□ -0.54
RFX4-202ENST00000357881 RTEL1-TNFRSF6BF6WH68 1400 aa11.65□□□□□ -0.54
RFX4-202ENST00000357881 ANKLE2Q86XL3 938 aa11.65□□□□□ -0.55
RFX4-202ENST00000357881 POLR3GLQ9BT43 218 aa11.65□□□□□ -0.55
RFX4-202ENST00000357881 ABCC3O15438 1527 aa11.64□□□□□ -0.55
RFX4-202ENST00000357881 KDM2AQ9Y2K7 1162 aa11.64□□□□□ -0.55
RFX4-202ENST00000357881 TNRQ92752 1358 aa11.64□□□□□ -0.55
RFX4-202ENST00000357881 PRDM10Q9NQV6 1147 aa11.64□□□□□ -0.55
RFX4-202ENST00000357881 NCLP19338 710 aaKnown RBP11.63□□□□□ -0.55
RFX4-202ENST00000357881 PIP4K2BP78356 416 aa11.63□□□□□ -0.55
RFX4-202ENST00000357881 ARID3CA6NKF2 412 aa11.63□□□□□ -0.55
RFX4-202ENST00000357881 THEMISQ8N1K5 641 aaPredicted RBP11.63□□□□□ -0.55
RFX4-202ENST00000357881 AFAP1Q8N556 730 aa11.62□□□□□ -0.55
RFX4-202ENST00000357881 UGGT1Q9NYU2 1555 aa11.62□□□□□ -0.55
RFX4-202ENST00000357881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.61□□□□□ -0.55
RFX4-202ENST00000357881 ZNF830Q96NB3 372 aaPredicted RBP11.61□□□□□ -0.55
RFX4-202ENST00000357881 CAMSAP2Q08AD1 1489 aa11.6□□□□□ -0.55
RFX4-202ENST00000357881 FGD6Q6ZV73 1430 aa11.6□□□□□ -0.55
RFX4-202ENST00000357881 P3H3Q8IVL6 736 aa11.6□□□□□ -0.55
RFX4-202ENST00000357881 WWC1Q8IX03 1113 aa11.6□□□□□ -0.55
RFX4-202ENST00000357881 SHPRHQ149N8 1683 aa11.6□□□□□ -0.55
RFX4-202ENST00000357881 LRRIQ1Q96JM4 1722 aa11.59□□□□□ -0.55
RFX4-202ENST00000357881 CENPJQ9HC77 1338 aaPredicted RBP11.59□□□□□ -0.55
RFX4-202ENST00000357881 PPM1GO15355 546 aaPredicted RBP11.59□□□□□ -0.55
RFX4-202ENST00000357881 IGSF3O75054 1194 aa11.59□□□□□ -0.55
RFX4-202ENST00000357881 USP35Q9P2H5 1018 aa11.58□□□□□ -0.56
RFX4-202ENST00000357881 SLIT1O75093 1534 aa11.58□□□□□ -0.56
RFX4-202ENST00000357881 SPAG9O60271 1321 aaKnown RBP11.57□□□□□ -0.56
RFX4-202ENST00000357881 NWD1Q149M9 1564 aa11.57□□□□□ -0.56
RFX4-202ENST00000357881 CFAP44Q96MT7 982 aa11.57□□□□□ -0.56
RFX4-202ENST00000357881 SYCP2Q9BX26 1530 aa11.57□□□□□ -0.56
RFX4-202ENST00000357881 ROBO1Q9Y6N7 1651 aa11.56□□□□□ -0.56
RFX4-202ENST00000357881 EIF2AK4Q9P2K8 1649 aaKnown RBP11.56□□□□□ -0.56
RFX4-202ENST00000357881 PHLPP1O60346 1717 aa11.56□□□□□ -0.56
RFX4-202ENST00000357881 NKTRP30414 1462 aaKnown RBP11.56□□□□□ -0.56
RFX4-202ENST00000357881 ARHGAP23Q9P227 1491 aa11.56□□□□□ -0.56
RFX4-202ENST00000357881 MIA2Q96PC5 1412 aa11.56□□□□□ -0.56
RFX4-202ENST00000357881 UBR1Q8IWV7 1749 aa11.55□□□□□ -0.56
RFX4-202ENST00000357881 JCADQ9P266 1359 aa11.55□□□□□ -0.56
RFX4-202ENST00000357881 ZNF772Q68DY9 489 aaPredicted RBP11.55□□□□□ -0.56
RFX4-202ENST00000357881 NCOA3Q9Y6Q9 1424 aa11.55□□□□□ -0.56
RFX4-202ENST00000357881 POTEAQ6S8J7 498 aa11.54□□□□□ -0.56
RFX4-202ENST00000357881 UPF1Q92900 1129 aaKnown RBP eCLIP11.54□□□□□ -0.56
RFX4-202ENST00000357881 SPATA31A6Q5VVP1 1343 aa11.54□□□□□ -0.56
RFX4-202ENST00000357881 TMEM51Q9NW97 253 aa11.54□□□□□ -0.56
RFX4-202ENST00000357881 CCDC9Q9Y3X0 531 aaKnown RBP11.54□□□□□ -0.56
RFX4-202ENST00000357881 DHX29Q7Z478 1369 aaKnown RBP11.52□□□□□ -0.56
RFX4-202ENST00000357881 SCAF11Q99590 1463 aaKnown RBP11.52□□□□□ -0.56
RFX4-202ENST00000357881 VGLL3A8MV65 326 aa11.52□□□□□ -0.57
RFX4-202ENST00000357881 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.52□□□□□ -0.57
RFX4-202ENST00000357881 LRP5O75197 1615 aa11.52□□□□□ -0.57
RFX4-202ENST00000357881 AHDC1Q5TGY3 1603 aaPredicted RBP11.52□□□□□ -0.57
RFX4-202ENST00000357881 CASKIN1Q8WXD9 1431 aa11.51□□□□□ -0.57
RFX4-202ENST00000357881 TMED8Q6PL24 325 aaPredicted RBP11.51□□□□□ -0.57
RFX4-202ENST00000357881 RGS22Q8NE09 1264 aa11.51□□□□□ -0.57
RFX4-202ENST00000357881 COL16A1Q07092 1604 aaPredicted RBP11.51□□□□□ -0.57
RFX4-202ENST00000357881 GSE1Q14687 1217 aa11.51□□□□□ -0.57
RFX4-202ENST00000357881 TMEM132AQ24JP5 1023 aa11.51□□□□□ -0.57
RFX4-202ENST00000357881 UBTFP17480 764 aaKnown RBP11.5□□□□□ -0.57
RFX4-202ENST00000357881 TIAM1Q13009 1591 aa11.5□□□□□ -0.57
RFX4-202ENST00000357881 PDCL3Q9H2J4 239 aa11.5□□□□□ -0.57
RFX4-202ENST00000357881 FYCO1Q9BQS8 1478 aa11.49□□□□□ -0.57
RFX4-202ENST00000357881 GPATCH8Q9UKJ3 1502 aaKnown RBP11.49□□□□□ -0.57
RFX4-202ENST00000357881 TICAM2Q86XR7 235 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms