RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 HFM1A2PYH4 1435 aa7.97□□□□□ -1.13
VPS13B-202ENST00000357162 HSP90B1P14625 803 aaKnown RBP7.97□□□□□ -1.13
VPS13B-202ENST00000357162 SMC4Q9NTJ3 1288 aa7.97□□□□□ -1.13
VPS13B-202ENST00000357162 SMG6Q86US8 1419 aaKnown RBP7.96□□□□□ -1.13
VPS13B-202ENST00000357162 POLR3GO15318 223 aaPredicted RBP7.96□□□□□ -1.13
VPS13B-202ENST00000357162 PES1O00541 588 aaKnown RBP7.96□□□□□ -1.14
VPS13B-202ENST00000357162 HS1BP3Q53T59 392 aa7.96□□□□□ -1.14
VPS13B-202ENST00000357162 PKD2Q13563 968 aa7.95□□□□□ -1.14
VPS13B-202ENST00000357162 SIN3AQ96ST3 1273 aa7.95□□□□□ -1.14
VPS13B-202ENST00000357162 HIP1O00291 1037 aa7.95□□□□□ -1.14
VPS13B-202ENST00000357162 LUC7LQ9NQ29 371 aaKnown RBP7.95□□□□□ -1.14
VPS13B-202ENST00000357162 EIF3JO75822 258 aaKnown RBP7.95□□□□□ -1.14
VPS13B-202ENST00000357162 U2AF1L5P0DN76 240 aaPredicted RBP7.95□□□□□ -1.14
VPS13B-202ENST00000357162 U2AF1Q01081 240 aaKnown RBP eCLIP7.95□□□□□ -1.146e-6■■■■□ 22.1
VPS13B-202ENST00000357162 CTR9Q6PD62 1173 aa7.95□□□□□ -1.14
VPS13B-202ENST00000357162 ERLIN1O75477 346 aa7.95□□□□□ -1.14
VPS13B-202ENST00000357162 CREBRFQ8IUR6 639 aa7.94□□□□□ -1.14
VPS13B-202ENST00000357162 GZF1Q9H116 711 aaPredicted RBP7.94□□□□□ -1.14
VPS13B-202ENST00000357162 URB1O60287 2271 aaKnown RBP7.94□□□□□ -1.14
VPS13B-202ENST00000357162 ATAD2Q6PL18 1390 aa7.94□□□□□ -1.14
VPS13B-202ENST00000357162 DHX16O60231 1041 aaKnown RBP7.94□□□□□ -1.14
VPS13B-202ENST00000357162 MFAP1P55081 439 aaKnown RBP7.94□□□□□ -1.14
VPS13B-202ENST00000357162 CCDC73Q6ZRK6 1079 aa7.94□□□□□ -1.14
VPS13B-202ENST00000357162 NFKBIBQ15653 356 aa7.94□□□□□ -1.14
VPS13B-202ENST00000357162 LEKR1Q6ZMV7 388 aa7.94□□□□□ -1.14
VPS13B-202ENST00000357162 NAP1L2Q9ULW6 460 aaPredicted RBP7.94□□□□□ -1.14
VPS13B-202ENST00000357162 MCM3P25205 808 aa7.94□□□□□ -1.14
VPS13B-202ENST00000357162 FGD6Q6ZV73 1430 aa7.94□□□□□ -1.14
VPS13B-202ENST00000357162 ERC2O15083 957 aa7.94□□□□□ -1.14
VPS13B-202ENST00000357162 MROH2BQ7Z745 1585 aa7.93□□□□□ -1.14
VPS13B-202ENST00000357162 ESPNB1AK53 854 aa7.93□□□□□ -1.14
VPS13B-202ENST00000357162 MNS1Q8NEH6 495 aa7.93□□□□□ -1.14
VPS13B-202ENST00000357162 SUPT6HQ7KZ85 1726 aaKnown RBP7.93□□□□□ -1.14
VPS13B-202ENST00000357162 JMYQ8N9B5 988 aa7.93□□□□□ -1.14
VPS13B-202ENST00000357162 CCDC47Q96A33 483 aaKnown RBP7.93□□□□□ -1.14
VPS13B-202ENST00000357162 CC2D1BQ5T0F9 858 aaKnown RBP7.93□□□□□ -1.14
VPS13B-202ENST00000357162 RUFY1Q96T51 708 aa7.93□□□□□ -1.14
VPS13B-202ENST00000357162 FAM13BQ9NYF5 915 aa7.93□□□□□ -1.14
VPS13B-202ENST00000357162 NEMFO60524 1076 aa7.93□□□□□ -1.14
VPS13B-202ENST00000357162 DEF6Q9H4E7 631 aa7.93□□□□□ -1.14
VPS13B-202ENST00000357162 CEP89Q96ST8 783 aa7.93□□□□□ -1.14
VPS13B-202ENST00000357162 PRKCSHP14314 528 aaPredicted RBP7.93□□□□□ -1.14
VPS13B-202ENST00000357162 RRP12Q5JTH9 1297 aaKnown RBP7.93□□□□□ -1.14
VPS13B-202ENST00000357162 CASKIN1Q8WXD9 1431 aa7.93□□□□□ -1.14
VPS13B-202ENST00000357162 H3BQV1 296 aa7.93□□□□□ -1.14
VPS13B-202ENST00000357162 IFFO2Q5TF58 517 aa7.93□□□□□ -1.14
VPS13B-202ENST00000357162 KLHL34Q8N239 644 aa7.92□□□□□ -1.14
VPS13B-202ENST00000357162 U2SURPO15042 1029 aaKnown RBP7.92□□□□□ -1.14
VPS13B-202ENST00000357162 CDC45O75419 566 aa7.92□□□□□ -1.14
VPS13B-202ENST00000357162 ZRSR2Q15696 482 aaKnown RBP7.92□□□□□ -1.14
VPS13B-202ENST00000357162 ZSCAN30Q86W11 494 aa7.92□□□□□ -1.14
VPS13B-202ENST00000357162 SF3A1Q15459 793 aaKnown RBP7.92□□□□□ -1.14
VPS13B-202ENST00000357162 RGL3Q3MIN7 710 aa7.92□□□□□ -1.14
VPS13B-202ENST00000357162 C22orf23Q9BZE7 217 aa7.92□□□□□ -1.14
VPS13B-202ENST00000357162 C11orf95C9JLR9 678 aaPredicted RBP7.92□□□□□ -1.14
VPS13B-202ENST00000357162 DZIP1LQ8IYY4 767 aaKnown RBP7.92□□□□□ -1.14
VPS13B-202ENST00000357162 HIRIP3Q9BW71 556 aaPredicted RBP7.91□□□□□ -1.14
VPS13B-202ENST00000357162 CALCOCO1Q9P1Z2 691 aa7.91□□□□□ -1.14
VPS13B-202ENST00000357162 PSMA5P28066 241 aa7.91□□□□□ -1.14
VPS13B-202ENST00000357162 PDCL3Q9H2J4 239 aa7.91□□□□□ -1.14
VPS13B-202ENST00000357162 TUBBP07437 444 aa7.91□□□□□ -1.14
VPS13B-202ENST00000357162 CCDC192P0DO97 292 aa7.91□□□□□ -1.14
VPS13B-202ENST00000357162 POTEB2H3BUK9 544 aa7.91□□□□□ -1.14
VPS13B-202ENST00000357162 EFCAB2Q5VUJ9 269 aa7.91□□□□□ -1.14
VPS13B-202ENST00000357162 PRIMPOLQ96LW4 560 aa7.91□□□□□ -1.14
VPS13B-202ENST00000357162 DYNC1I1O14576 645 aa7.91□□□□□ -1.14
VPS13B-202ENST00000357162 CLUAP1Q96AJ1 413 aa7.91□□□□□ -1.14
VPS13B-202ENST00000357162 L3MBTL2Q969R5 705 aa7.9□□□□□ -1.14
VPS13B-202ENST00000357162 UBE2Q2Q8WVN8 375 aa7.9□□□□□ -1.14
VPS13B-202ENST00000357162 SRCIN1Q9C0H9 1055 aa7.9□□□□□ -1.15
VPS13B-202ENST00000357162 EHBP1L1Q8N3D4 1523 aa7.9□□□□□ -1.15
VPS13B-202ENST00000357162 ARID3CA6NKF2 412 aa7.9□□□□□ -1.15
VPS13B-202ENST00000357162 EVC2Q86UK5 1308 aa7.9□□□□□ -1.15
VPS13B-202ENST00000357162 MAP9Q49MG5 647 aa7.9□□□□□ -1.15
VPS13B-202ENST00000357162 GBP3Q9H0R5 595 aa7.9□□□□□ -1.15
VPS13B-202ENST00000357162 AEBP1Q8IUX7 1158 aa7.89□□□□□ -1.15
VPS13B-202ENST00000357162 HOMER1Q86YM7 354 aa7.89□□□□□ -1.15
VPS13B-202ENST00000357162 ANKRD1Q15327 319 aa7.89□□□□□ -1.15
VPS13B-202ENST00000357162 DDX11Q96FC9 970 aa7.89□□□□□ -1.15
VPS13B-202ENST00000357162 BACH2Q9BYV9 841 aa7.89□□□□□ -1.15
VPS13B-202ENST00000357162 CCDC112Q8NEF3 446 aa7.89□□□□□ -1.15
VPS13B-202ENST00000357162 NOL10Q9BSC4 688 aaKnown RBP7.89□□□□□ -1.15
VPS13B-202ENST00000357162 GOLGA6L10A6NI86 522 aa7.89□□□□□ -1.15
VPS13B-202ENST00000357162 DAPK1P53355 1430 aa7.89□□□□□ -1.15
VPS13B-202ENST00000357162 KIAA0754O94854 1291 aa7.88□□□□□ -1.15
VPS13B-202ENST00000357162 MYO9BQ13459 2157 aa7.88□□□□□ -1.15
VPS13B-202ENST00000357162 H0YHG0 523 aa7.88□□□□□ -1.15
VPS13B-202ENST00000357162 GCC1Q96CN9 775 aa7.88□□□□□ -1.15
VPS13B-202ENST00000357162 IFT57Q9NWB7 429 aa7.88□□□□□ -1.15
VPS13B-202ENST00000357162 TERF1P54274 439 aa7.88□□□□□ -1.15
VPS13B-202ENST00000357162 GNAI1P63096 354 aa7.88□□□□□ -1.15
VPS13B-202ENST00000357162 WDR33Q9C0J8 1336 aaKnown RBP7.88□□□□□ -1.15
VPS13B-202ENST00000357162 FAM193AP78312 1265 aa7.88□□□□□ -1.15
VPS13B-202ENST00000357162 NEUROD2Q15784 382 aa7.88□□□□□ -1.15
VPS13B-202ENST00000357162 CBFA2T2O43439 604 aa7.88□□□□□ -1.15
VPS13B-202ENST00000357162 SAFBQ15424 915 aaKnown RBP eCLIP7.88□□□□□ -1.15
VPS13B-202ENST00000357162 LUZP1Q86V48 1076 aa7.88□□□□□ -1.15
VPS13B-202ENST00000357162 GOLGA6L9A6NEM1 432 aa7.88□□□□□ -1.15
VPS13B-202ENST00000357162 SASS6Q6UVJ0 657 aa7.88□□□□□ -1.15
VPS13B-202ENST00000357162 WIZO95785 1651 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms