RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 IPO8O15397 1037 aaKnown RBP15.5■□□□□ 0.07
COLCA1-201ENST00000355430 COG6Q9Y2V7 657 aa15.5■□□□□ 0.07
COLCA1-201ENST00000355430 GRIN2AQ12879 1464 aa15.5■□□□□ 0.07
COLCA1-201ENST00000355430 CD109Q6YHK3 1445 aa15.5■□□□□ 0.07
COLCA1-201ENST00000355430 SCAPERQ9BY12 1400 aa15.5■□□□□ 0.07
COLCA1-201ENST00000355430 CDK13Q14004 1512 aaKnown RBP15.5■□□□□ 0.07
COLCA1-201ENST00000355430 GOLGA6L3A6NEY3 463 aa15.48■□□□□ 0.07
COLCA1-201ENST00000355430 TROQ12816 1431 aaPredicted RBP15.48■□□□□ 0.07
COLCA1-201ENST00000355430 ADAMTS8Q9UP79 889 aa15.47■□□□□ 0.07
COLCA1-201ENST00000355430 IQGAP2Q13576 1575 aa15.46■□□□□ 0.07
COLCA1-201ENST00000355430 DCAF8L1A6NGE4 600 aa15.46■□□□□ 0.07
COLCA1-201ENST00000355430 URB2Q14146 1524 aaKnown RBP15.46■□□□□ 0.06
COLCA1-201ENST00000355430 GBP4Q96PP9 640 aa15.46■□□□□ 0.06
COLCA1-201ENST00000355430 CGNL1Q0VF96 1302 aa15.45■□□□□ 0.06
COLCA1-201ENST00000355430 EPRSP07814 1512 aaKnown RBP15.45■□□□□ 0.06
COLCA1-201ENST00000355430 LMOD3Q0VAK6 560 aa15.45■□□□□ 0.06
COLCA1-201ENST00000355430 APBB1O00213 710 aa15.45■□□□□ 0.06
COLCA1-201ENST00000355430 C1orf141Q5JVX7 400 aa15.45■□□□□ 0.06
COLCA1-201ENST00000355430 DNTTIP2Q5QJE6 756 aaKnown RBP15.45■□□□□ 0.06
COLCA1-201ENST00000355430 CUL7Q14999 1698 aa15.45■□□□□ 0.06
COLCA1-201ENST00000355430 NBPF1Q3BBV0 1214 aa15.45■□□□□ 0.06
COLCA1-201ENST00000355430 GTF2E1P29083 439 aaPredicted RBP15.44■□□□□ 0.06
COLCA1-201ENST00000355430 NFKBIBQ15653 356 aa15.44■□□□□ 0.06
COLCA1-201ENST00000355430 ANKRD30BQ9BXX2 1392 aa15.43■□□□□ 0.06
COLCA1-201ENST00000355430 G3V3G9 751 aa15.43■□□□□ 0.06
COLCA1-201ENST00000355430 DCAF8Q5TAQ9 597 aa15.43■□□□□ 0.06
COLCA1-201ENST00000355430 STK31Q9BXU1 1019 aa15.43■□□□□ 0.06
COLCA1-201ENST00000355430 FOXD4L1Q9NU39 408 aa15.43■□□□□ 0.06
COLCA1-201ENST00000355430 NCOA1Q15788 1441 aa15.43■□□□□ 0.06
COLCA1-201ENST00000355430 GPRASP1Q5JY77 1395 aa15.42■□□□□ 0.06
COLCA1-201ENST00000355430 DMRT2Q9Y5R5 561 aa15.42■□□□□ 0.06
COLCA1-201ENST00000355430 SLC52A1Q9NWF4 448 aa15.42■□□□□ 0.06
COLCA1-201ENST00000355430 BACH2Q9BYV9 841 aa15.41■□□□□ 0.06
COLCA1-201ENST00000355430 HDAC5Q9UQL6 1122 aa15.41■□□□□ 0.06
COLCA1-201ENST00000355430 MSNP26038 577 aaKnown RBP15.41■□□□□ 0.06
COLCA1-201ENST00000355430 ROCK1Q13464 1354 aa15.4■□□□□ 0.06
COLCA1-201ENST00000355430 PTPRKQ15262 1439 aa15.4■□□□□ 0.06
COLCA1-201ENST00000355430 C9orf84Q5VXU9 1444 aa15.4■□□□□ 0.06
COLCA1-201ENST00000355430 PPP2R1AP30153 589 aa15.39■□□□□ 0.05
COLCA1-201ENST00000355430 ZNF608Q9ULD9 1512 aaPredicted RBP15.39■□□□□ 0.05
COLCA1-201ENST00000355430 SF3B2Q13435 895 aaKnown RBP15.39■□□□□ 0.05
COLCA1-201ENST00000355430 PLCB2Q00722 1185 aa15.39■□□□□ 0.05
COLCA1-201ENST00000355430 ZKSCAN2Q63HK3 967 aa15.38■□□□□ 0.05
COLCA1-201ENST00000355430 PANK1Q8TE04 598 aa15.38■□□□□ 0.05
COLCA1-201ENST00000355430 PLB1Q6P1J6 1458 aa15.38■□□□□ 0.05
COLCA1-201ENST00000355430 PTMSP20962 102 aa15.37■□□□□ 0.05
COLCA1-201ENST00000355430 ESCO1Q5FWF5 840 aa15.37■□□□□ 0.05
COLCA1-201ENST00000355430 PIP4K2BP78356 416 aa15.37■□□□□ 0.05
COLCA1-201ENST00000355430 ABCC5O15440 1437 aa15.37■□□□□ 0.05
COLCA1-201ENST00000355430 TAF7LQ5H9L4 462 aa15.36■□□□□ 0.05
COLCA1-201ENST00000355430 CFAP44Q96MT7 982 aa15.36■□□□□ 0.05
COLCA1-201ENST00000355430 TTC5Q8N0Z6 440 aa15.35■□□□□ 0.05
COLCA1-201ENST00000355430 IL27Q8NEV9 243 aa15.35■□□□□ 0.05
COLCA1-201ENST00000355430 SYTL4Q96C24 671 aaPredicted RBP15.35■□□□□ 0.05
COLCA1-201ENST00000355430 TEX14Q8IWB6 1497 aa15.34■□□□□ 0.05
COLCA1-201ENST00000355430 MCCP23508 829 aa15.34■□□□□ 0.05
COLCA1-201ENST00000355430 RPRD2Q5VT52 1461 aaKnown RBP15.34■□□□□ 0.05
COLCA1-201ENST00000355430 TEFQ10587 303 aa15.33■□□□□ 0.05
COLCA1-201ENST00000355430 RUNDC1Q96C34 613 aa15.33■□□□□ 0.05
COLCA1-201ENST00000355430 RAPGEF4Q8WZA2 1011 aa15.33■□□□□ 0.04
COLCA1-201ENST00000355430 CFAP43Q8NDM7 1665 aa15.33■□□□□ 0.04
COLCA1-201ENST00000355430 ADGRL1O94910 1474 aa15.33■□□□□ 0.04
COLCA1-201ENST00000355430 DDX11L8A8MPP1 907 aa15.33■□□□□ 0.04
COLCA1-201ENST00000355430 NGEFQ8N5V2 710 aa15.32■□□□□ 0.04
COLCA1-201ENST00000355430 ERBINQ96RT1 1412 aa15.32■□□□□ 0.04
COLCA1-201ENST00000355430 CAMSAP2Q08AD1 1489 aa15.32■□□□□ 0.04
COLCA1-201ENST00000355430 KCNJ4P48050 445 aa15.32■□□□□ 0.04
COLCA1-201ENST00000355430 BRPF3Q9ULD4 1205 aa15.32■□□□□ 0.04
COLCA1-201ENST00000355430 SKAP1Q86WV1 359 aa15.31■□□□□ 0.04
COLCA1-201ENST00000355430 DZIP1LQ8IYY4 767 aaKnown RBP15.31■□□□□ 0.04
COLCA1-201ENST00000355430 DENND4BO75064 1496 aaPredicted RBP15.31■□□□□ 0.04
COLCA1-201ENST00000355430 BCAR3O75815 825 aa15.31■□□□□ 0.04
COLCA1-201ENST00000355430 CHMP3Q9Y3E7 222 aa15.31■□□□□ 0.04
COLCA1-201ENST00000355430 ANKRD45Q5TZF3 282 aa15.31■□□□□ 0.04
COLCA1-201ENST00000355430 NUTM2BA6NNL0 878 aaPredicted RBP15.3■□□□□ 0.04
COLCA1-201ENST00000355430 NUTM2EB1AL46 878 aaPredicted RBP15.3■□□□□ 0.04
COLCA1-201ENST00000355430 CDK11BP21127 795 aaKnown RBP15.3■□□□□ 0.04
COLCA1-201ENST00000355430 FGD1P98174 961 aa15.3■□□□□ 0.04
COLCA1-201ENST00000355430 NUTM2AQ8IVF1 878 aaPredicted RBP15.3■□□□□ 0.04
COLCA1-201ENST00000355430 FRAT2O75474 233 aaPredicted RBP15.3■□□□□ 0.04
COLCA1-201ENST00000355430 RSPH6AQ9H0K4 717 aa15.3■□□□□ 0.04
COLCA1-201ENST00000355430 ELL2O00472 640 aaPredicted RBP15.29■□□□□ 0.04
COLCA1-201ENST00000355430 NLRP2Q9NX02 1062 aa15.29■□□□□ 0.04
COLCA1-201ENST00000355430 ISY1Q9ULR0 285 aaKnown RBP15.29■□□□□ 0.04
COLCA1-201ENST00000355430 GORABQ5T7V8 394 aa15.29■□□□□ 0.04
COLCA1-201ENST00000355430 NLRP6P59044 892 aa15.28■□□□□ 0.04
COLCA1-201ENST00000355430 PPP6R1Q9UPN7 881 aa15.28■□□□□ 0.04
COLCA1-201ENST00000355430 DDX19BQ9UMR2 479 aa15.28■□□□□ 0.04
COLCA1-201ENST00000355430 UGGT2Q9NYU1 1516 aa15.27■□□□□ 0.03
COLCA1-201ENST00000355430 KLHL34Q8N239 644 aa15.26■□□□□ 0.03
COLCA1-201ENST00000355430 RPGRIP1LQ68CZ1 1315 aa15.26■□□□□ 0.03
COLCA1-201ENST00000355430 TMEM132EQ6IEE7 984 aa15.26■□□□□ 0.03
COLCA1-201ENST00000355430 CHMP5Q9NZZ3 219 aa15.26■□□□□ 0.03
COLCA1-201ENST00000355430 ABTB2Q8N961 1025 aa15.26■□□□□ 0.03
COLCA1-201ENST00000355430 KIF14Q15058 1648 aa15.26■□□□□ 0.03
COLCA1-201ENST00000355430 CFAP70Q5T0N1 1121 aa15.26■□□□□ 0.03
COLCA1-201ENST00000355430 SLC26A8Q96RN1 970 aa15.26■□□□□ 0.03
COLCA1-201ENST00000355430 C20orf194Q5TEA3 1177 aa15.25■□□□□ 0.03
COLCA1-201ENST00000355430 C22orf23Q9BZE7 217 aa15.25■□□□□ 0.03
COLCA1-201ENST00000355430 ARHGEF11O15085 1522 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms