RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 RNF17Q9BXT8 1623 aaKnown RBP25.77■■□□□ 1.72
COL13A1-201ENST00000354547 PDE4AP27815 886 aa25.77■■□□□ 1.72
COL13A1-201ENST00000354547 UGGT1Q9NYU2 1555 aa25.76■■□□□ 1.71
COL13A1-201ENST00000354547 TRPM2O94759 1503 aa25.76■■□□□ 1.71
COL13A1-201ENST00000354547 RTEL1-TNFRSF6BF6WH68 1400 aa25.76■■□□□ 1.71
COL13A1-201ENST00000354547 TCERG1O14776 1098 aaKnown RBP25.76■■□□□ 1.71
COL13A1-201ENST00000354547 CLASP1Q7Z460 1538 aa25.76■■□□□ 1.71
COL13A1-201ENST00000354547 BCL11AQ9H165 835 aa25.75■■□□□ 1.71
COL13A1-201ENST00000354547 PTPRTO14522 1441 aa25.74■■□□□ 1.71
COL13A1-201ENST00000354547 SPHKAPQ2M3C7 1700 aa25.72■■□□□ 1.71
COL13A1-201ENST00000354547 GOLGA2Q08379 1002 aa25.72■■□□□ 1.71
COL13A1-201ENST00000354547 SENP3Q9H4L4 574 aaPredicted RBP25.72■■□□□ 1.71
COL13A1-201ENST00000354547 ZMYM4Q5VZL5 1548 aa25.72■■□□□ 1.71
COL13A1-201ENST00000354547 DUSP27Q5VZP5 1158 aa25.72■■□□□ 1.71
COL13A1-201ENST00000354547 ADGRL1O94910 1474 aa25.71■■□□□ 1.71
COL13A1-201ENST00000354547 ATP7AQ04656 1500 aa25.71■■□□□ 1.71
COL13A1-201ENST00000354547 EIF3AQ14152 1382 aaKnown RBP25.71■■□□□ 1.71
COL13A1-201ENST00000354547 APAF1O14727 1248 aa25.71■■□□□ 1.71
COL13A1-201ENST00000354547 TNNT2P45379 298 aaPredicted RBP25.7■■□□□ 1.71
COL13A1-201ENST00000354547 IQGAP1P46940 1657 aa25.7■■□□□ 1.71
COL13A1-201ENST00000354547 GGT6Q6P531 493 aa25.69■■□□□ 1.7
COL13A1-201ENST00000354547 ASXL1Q8IXJ9 1541 aa25.68■■□□□ 1.7
COL13A1-201ENST00000354547 CEP152O94986 1710 aa25.67■■□□□ 1.7
COL13A1-201ENST00000354547 STAC3Q96MF2 364 aa25.67■■□□□ 1.7
COL13A1-201ENST00000354547 CARD14Q9BXL6 1004 aa25.67■■□□□ 1.7
COL13A1-201ENST00000354547 TRAK1Q9UPV9 953 aa25.67■■□□□ 1.7
COL13A1-201ENST00000354547 BACH2Q9BYV9 841 aa25.66■■□□□ 1.7
COL13A1-201ENST00000354547 SPINK5Q9NQ38 1064 aaPredicted RBP25.66■■□□□ 1.7
COL13A1-201ENST00000354547 DEKP35659 375 aaKnown RBP25.65■■□□□ 1.7
COL13A1-201ENST00000354547 NUTM2DQ5VT03 806 aaPredicted RBP25.64■■□□□ 1.7
COL13A1-201ENST00000354547 INSRP06213 1382 aa25.64■■□□□ 1.7
COL13A1-201ENST00000354547 TET3O43151 1660 aa25.64■■□□□ 1.69
COL13A1-201ENST00000354547 TMEM132EQ6IEE7 984 aa25.63■■□□□ 1.69
COL13A1-201ENST00000354547 CFAP65Q6ZU64 1925 aaKnown RBP25.62■■□□□ 1.69
COL13A1-201ENST00000354547 SYNMO15061 1565 aa25.62■■□□□ 1.69
COL13A1-201ENST00000354547 NEUROD2Q15784 382 aa25.61■■□□□ 1.69
COL13A1-201ENST00000354547 SLFN5Q08AF3 891 aa25.61■■□□□ 1.69
COL13A1-201ENST00000354547 ASXL2Q76L83 1435 aa25.6■■□□□ 1.69
COL13A1-201ENST00000354547 ZNF521Q96K83 1311 aa25.6■■□□□ 1.69
COL13A1-201ENST00000354547 LAS1LQ9Y4W2 734 aaKnown RBP25.6■■□□□ 1.69
COL13A1-201ENST00000354547 DEPDC5O75140 1603 aa25.59■■□□□ 1.69
COL13A1-201ENST00000354547 DMRT2Q9Y5R5 561 aa25.59■■□□□ 1.69
COL13A1-201ENST00000354547 BCAR3O75815 825 aa25.58■■□□□ 1.69
COL13A1-201ENST00000354547 MS4A1P11836 297 aa25.58■■□□□ 1.69
COL13A1-201ENST00000354547 ARAP3Q8WWN8 1544 aa25.58■■□□□ 1.68
COL13A1-201ENST00000354547 INO80Q9ULG1 1556 aaPredicted RBP25.57■■□□□ 1.68
COL13A1-201ENST00000354547 ERVK-7P63135 1459 aa25.57■■□□□ 1.68
COL13A1-201ENST00000354547 NPM1P06748 294 aaKnown RBP eCLIP25.57■■□□□ 1.68
COL13A1-201ENST00000354547 SLC12A5Q9H2X9 1139 aa25.57■■□□□ 1.68
COL13A1-201ENST00000354547 PIK3C2GO75747 1445 aa25.57■■□□□ 1.68
COL13A1-201ENST00000354547 NOS1P29475 1434 aa25.57■■□□□ 1.68
COL13A1-201ENST00000354547 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.56■■□□□ 1.68
COL13A1-201ENST00000354547 MYOM1P52179 1685 aa25.55■■□□□ 1.68
COL13A1-201ENST00000354547 RTL5Q5HYW3 569 aaPredicted RBP25.55■■□□□ 1.68
COL13A1-201ENST00000354547 CENPJQ9HC77 1338 aaPredicted RBP25.55■■□□□ 1.68
COL13A1-201ENST00000354547 ABCA9Q8IUA7 1624 aa25.55■■□□□ 1.68
COL13A1-201ENST00000354547 KDM5AP29375 1690 aaKnown RBP25.54■■□□□ 1.68
COL13A1-201ENST00000354547 RRP7AQ9Y3A4 280 aaKnown RBP25.54■■□□□ 1.68
COL13A1-201ENST00000354547 RGS3P49796 1198 aa25.53■■□□□ 1.68
COL13A1-201ENST00000354547 ABCA6Q8N139 1617 aa25.53■■□□□ 1.68
COL13A1-201ENST00000354547 MORC1Q86VD1 984 aa25.53■■□□□ 1.68
COL13A1-201ENST00000354547 VWDEQ8N2E2 1590 aa25.52■■□□□ 1.68
COL13A1-201ENST00000354547 MAP3K4Q9Y6R4 1608 aa25.52■■□□□ 1.68
COL13A1-201ENST00000354547 MROH1Q8NDA8 1641 aa25.51■■□□□ 1.67
COL13A1-201ENST00000354547 SAFB2Q14151 953 aaKnown RBP eCLIP25.5■■□□□ 1.67
COL13A1-201ENST00000354547 NPC1L1Q9UHC9 1359 aa25.5■■□□□ 1.67
COL13A1-201ENST00000354547 KDM2BQ8NHM5 1336 aa25.49■■□□□ 1.67
COL13A1-201ENST00000354547 CENPQQ7L2Z9 268 aaPredicted RBP25.48■■□□□ 1.67
COL13A1-201ENST00000354547 KIF1BO60333 1816 aa25.48■■□□□ 1.67
COL13A1-201ENST00000354547 SLC24A1O60721 1099 aa25.47■■□□□ 1.67
COL13A1-201ENST00000354547 EFCAB6Q5THR3 1501 aa25.46■■□□□ 1.67
COL13A1-201ENST00000354547 NSD3Q9BZ95 1437 aa25.46■■□□□ 1.67
COL13A1-201ENST00000354547 E9PSI1 815 aa25.46■■□□□ 1.67
COL13A1-201ENST00000354547 CANXP27824 592 aaKnown RBP25.46■■□□□ 1.67
COL13A1-201ENST00000354547 SLC4A3P48751 1232 aa25.46■■□□□ 1.67
COL13A1-201ENST00000354547 MYOM2P54296 1465 aa25.46■■□□□ 1.67
COL13A1-201ENST00000354547 MROH2AA6NES4 1674 aa25.46■■□□□ 1.67
COL13A1-201ENST00000354547 PPRC1Q5VV67 1664 aaKnown RBP25.46■■□□□ 1.67
COL13A1-201ENST00000354547 RAPGEF3O95398 923 aa25.45■■□□□ 1.66
COL13A1-201ENST00000354547 TRMT2AQ8IZ69 625 aaKnown RBP25.45■■□□□ 1.66
COL13A1-201ENST00000354547 KIDINS220Q9ULH0 1771 aa25.45■■□□□ 1.66
COL13A1-201ENST00000354547 FRAT1Q92837 279 aaPredicted RBP25.44■■□□□ 1.66
COL13A1-201ENST00000354547 NKTRP30414 1462 aaKnown RBP25.42■■□□□ 1.66
COL13A1-201ENST00000354547 WWC1Q8IX03 1113 aa25.42■■□□□ 1.66
COL13A1-201ENST00000354547 ZNF518AQ6AHZ1 1483 aa25.42■■□□□ 1.66
COL13A1-201ENST00000354547 C14orf93Q9H972 538 aaKnown RBP25.42■■□□□ 1.66
COL13A1-201ENST00000354547 KIAA1210Q9ULL0 1709 aa25.42■■□□□ 1.66
COL13A1-201ENST00000354547 NPATQ14207 1427 aa25.41■■□□□ 1.66
COL13A1-201ENST00000354547 PANK1Q8TE04 598 aa25.4■■□□□ 1.66
COL13A1-201ENST00000354547 CD109Q6YHK3 1445 aa25.4■■□□□ 1.66
COL13A1-201ENST00000354547 NEFMP07197 916 aa25.4■■□□□ 1.66
COL13A1-201ENST00000354547 MTHFSP49914 203 aa25.39■■□□□ 1.66
COL13A1-201ENST00000354547 STK26Q9P289 416 aa25.39■■□□□ 1.66
COL13A1-201ENST00000354547 COG6Q9Y2V7 657 aa25.39■■□□□ 1.65
COL13A1-201ENST00000354547 BCL2L13Q9BXK5 485 aa25.37■■□□□ 1.65
COL13A1-201ENST00000354547 TCP11L2Q8N4U5 519 aa25.37■■□□□ 1.65
COL13A1-201ENST00000354547 CABP2Q9NPB3 220 aa25.37■■□□□ 1.65
COL13A1-201ENST00000354547 IGHDP01880 384 aa25.35■■□□□ 1.65
COL13A1-201ENST00000354547 FAM161AQ3B820 660 aa25.34■■□□□ 1.65
COL13A1-201ENST00000354547 POLR3AO14802 1390 aaPredicted RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms