RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 CLTCQ00610 1675 aaKnown RBP7.5□□□□□ -1.21
VCAM1-202ENST00000347652 RAB3GAP2Q9H2M9 1393 aa7.49□□□□□ -1.21
VCAM1-202ENST00000347652 MROH1Q8NDA8 1641 aa7.49□□□□□ -1.21
VCAM1-202ENST00000347652 C3P01024 1663 aa7.49□□□□□ -1.21
VCAM1-202ENST00000347652 PROM2Q8N271 834 aa7.48□□□□□ -1.21
VCAM1-202ENST00000347652 GPBP1L1Q9HC44 474 aaPredicted RBP7.48□□□□□ -1.21
VCAM1-202ENST00000347652 ERBINQ96RT1 1412 aa7.48□□□□□ -1.21
VCAM1-202ENST00000347652 ANKRD50Q9ULJ7 1429 aa7.48□□□□□ -1.21
VCAM1-202ENST00000347652 AEBP1Q8IUX7 1158 aa7.48□□□□□ -1.21
VCAM1-202ENST00000347652 CCDC82Q8N4S0 544 aa7.47□□□□□ -1.21
VCAM1-202ENST00000347652 POLR3GLQ9BT43 218 aa7.47□□□□□ -1.21
VCAM1-202ENST00000347652 BRD2P25440 801 aaKnown RBP7.47□□□□□ -1.21
VCAM1-202ENST00000347652 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.47□□□□□ -1.21
VCAM1-202ENST00000347652 ZMYM3Q14202 1370 aa7.47□□□□□ -1.21
VCAM1-202ENST00000347652 MKRN3Q13064 507 aaKnown RBP7.46□□□□□ -1.21
VCAM1-202ENST00000347652 CEP152O94986 1710 aa7.46□□□□□ -1.21
VCAM1-202ENST00000347652 RNF17Q9BXT8 1623 aaKnown RBP7.46□□□□□ -1.22
VCAM1-202ENST00000347652 EIF2AK4Q9P2K8 1649 aaKnown RBP7.46□□□□□ -1.22
VCAM1-202ENST00000347652 ESF1Q9H501 851 aaKnown RBP7.46□□□□□ -1.22
VCAM1-202ENST00000347652 FBXO31Q5XUX0 539 aaPredicted RBP7.46□□□□□ -1.22
VCAM1-202ENST00000347652 ZC3H15Q8WU90 426 aaKnown RBP7.46□□□□□ -1.22
VCAM1-202ENST00000347652 ACIN1Q9UKV3 1341 aaKnown RBP7.45□□□□□ -1.22
VCAM1-202ENST00000347652 WASHC2CQ9Y4E1 1318 aa7.45□□□□□ -1.22
VCAM1-202ENST00000347652 HSPA2P54652 639 aa7.45□□□□□ -1.22
VCAM1-202ENST00000347652 CFAP65Q6ZU64 1925 aaKnown RBP7.45□□□□□ -1.22
VCAM1-202ENST00000347652 ABCC3O15438 1527 aa7.44□□□□□ -1.22
VCAM1-202ENST00000347652 KDM5DQ9BY66 1539 aa7.44□□□□□ -1.22
VCAM1-202ENST00000347652 LMTK3Q96Q04 1460 aa7.44□□□□□ -1.22
VCAM1-202ENST00000347652 IL27Q8NEV9 243 aa7.44□□□□□ -1.22
VCAM1-202ENST00000347652 MROH2AA6NES4 1674 aa7.44□□□□□ -1.22
VCAM1-202ENST00000347652 DEPDC5O75140 1603 aa7.44□□□□□ -1.22
VCAM1-202ENST00000347652 UNC13BO14795 1591 aa7.44□□□□□ -1.22
VCAM1-202ENST00000347652 PRDM15P57071 1507 aaPredicted RBP7.44□□□□□ -1.22
VCAM1-202ENST00000347652 CNTLNQ9NXG0 1405 aa7.43□□□□□ -1.22
VCAM1-202ENST00000347652 PDE4CQ08493 712 aa7.43□□□□□ -1.22
VCAM1-202ENST00000347652 KCNV2Q8TDN2 545 aa7.43□□□□□ -1.22
VCAM1-202ENST00000347652 HMGB1P09429 215 aaKnown RBP7.42□□□□□ -1.22
VCAM1-202ENST00000347652 CAMSAP1Q5T5Y3 1602 aa7.42□□□□□ -1.22
VCAM1-202ENST00000347652 SPOCK2Q92563 424 aa7.42□□□□□ -1.22
VCAM1-202ENST00000347652 TRIM52Q96A61 297 aa7.42□□□□□ -1.22
VCAM1-202ENST00000347652 ZNF692Q9BU19 519 aaPredicted RBP7.42□□□□□ -1.22
VCAM1-202ENST00000347652 USP35Q9P2H5 1018 aa7.42□□□□□ -1.22
VCAM1-202ENST00000347652 VWDEQ8N2E2 1590 aa7.41□□□□□ -1.22
VCAM1-202ENST00000347652 NUP155O75694 1391 aa7.41□□□□□ -1.22
VCAM1-202ENST00000347652 PZPP20742 1482 aa7.41□□□□□ -1.22
VCAM1-202ENST00000347652 IQGAP3Q86VI3 1631 aa7.41□□□□□ -1.22
VCAM1-202ENST00000347652 PREX1Q8TCU6 1659 aa7.41□□□□□ -1.22
VCAM1-202ENST00000347652 RNF216Q9NWF9 866 aaPredicted RBP7.41□□□□□ -1.22
VCAM1-202ENST00000347652 ZC3H13Q5T200 1668 aaKnown RBP7.4□□□□□ -1.22
VCAM1-202ENST00000347652 NPATQ14207 1427 aa7.4□□□□□ -1.22
VCAM1-202ENST00000347652 SETD1BQ9UPS6 1966 aaKnown RBP7.4□□□□□ -1.22
VCAM1-202ENST00000347652 DHX57Q6P158 1386 aaKnown RBP7.4□□□□□ -1.22
VCAM1-202ENST00000347652 MYO3AQ8NEV4 1616 aa7.4□□□□□ -1.23
VCAM1-202ENST00000347652 GTPBP6O43824 516 aaPredicted RBP7.4□□□□□ -1.23
VCAM1-202ENST00000347652 MFAP1P55081 439 aaKnown RBP7.4□□□□□ -1.23
VCAM1-202ENST00000347652 MPHOSPH9Q99550 1183 aa7.4□□□□□ -1.23
VCAM1-202ENST00000347652 FAM135AQ9P2D6 1515 aa7.4□□□□□ -1.23
VCAM1-202ENST00000347652 KANK1Q14678 1352 aa7.39□□□□□ -1.23
VCAM1-202ENST00000347652 UHRF1BP1Q6BDS2 1440 aa7.39□□□□□ -1.23
VCAM1-202ENST00000347652 LMTK2Q8IWU2 1503 aa7.39□□□□□ -1.23
VCAM1-202ENST00000347652 ERVK-7P63135 1459 aa7.39□□□□□ -1.23
VCAM1-202ENST00000347652 TNRQ92752 1358 aa7.38□□□□□ -1.23
VCAM1-202ENST00000347652 EFCAB6Q5THR3 1501 aa7.38□□□□□ -1.23
VCAM1-202ENST00000347652 IRX6P78412 446 aaPredicted RBP7.38□□□□□ -1.23
VCAM1-202ENST00000347652 SPATA31D1Q6ZQQ2 1576 aa7.38□□□□□ -1.23
VCAM1-202ENST00000347652 CEP170BQ9Y4F5 1589 aaPredicted RBP7.37□□□□□ -1.23
VCAM1-202ENST00000347652 E9PCH4 1651 aa7.37□□□□□ -1.23
VCAM1-202ENST00000347652 TET3O43151 1660 aa7.37□□□□□ -1.23
VCAM1-202ENST00000347652 SYNMO15061 1565 aa7.37□□□□□ -1.23
VCAM1-202ENST00000347652 MKRN4PQ13434 485 aaPredicted RBP7.37□□□□□ -1.23
VCAM1-202ENST00000347652 STRCQ7RTU9 1775 aa7.37□□□□□ -1.23
VCAM1-202ENST00000347652 FAM177A1Q8N128 213 aaPredicted RBP7.37□□□□□ -1.23
VCAM1-202ENST00000347652 UGGT1Q9NYU2 1555 aa7.37□□□□□ -1.23
VCAM1-202ENST00000347652 ARHGAP31Q2M1Z3 1444 aa7.36□□□□□ -1.23
VCAM1-202ENST00000347652 GZF1Q9H116 711 aaPredicted RBP7.36□□□□□ -1.23
VCAM1-202ENST00000347652 ZNF142P52746 1687 aaPredicted RBP7.36□□□□□ -1.23
VCAM1-202ENST00000347652 TMCO4Q5TGY1 634 aa7.36□□□□□ -1.23
VCAM1-202ENST00000347652 CCER1Q8TC90 406 aaPredicted RBP7.35□□□□□ -1.23
VCAM1-202ENST00000347652 RNF25Q96BH1 459 aaPredicted RBP7.35□□□□□ -1.23
VCAM1-202ENST00000347652 NCKAP5LQ9HCH0 1330 aa7.34□□□□□ -1.23
VCAM1-202ENST00000347652 IDI1Q13907 227 aa7.34□□□□□ -1.23
VCAM1-202ENST00000347652 HS6ST3Q8IZP7 471 aa7.34□□□□□ -1.23
VCAM1-202ENST00000347652 BCL11AQ9H165 835 aa7.34□□□□□ -1.23
VCAM1-202ENST00000347652 A2ML1A8K2U0 1454 aa7.34□□□□□ -1.23
VCAM1-202ENST00000347652 RPRD2Q5VT52 1461 aaKnown RBP7.34□□□□□ -1.23
VCAM1-202ENST00000347652 NOS1P29475 1434 aa7.34□□□□□ -1.23
VCAM1-202ENST00000347652 CLSPNQ9HAW4 1339 aa7.34□□□□□ -1.23
VCAM1-202ENST00000347652 PIK3C2BO00750 1634 aa7.34□□□□□ -1.23
VCAM1-202ENST00000347652 ANKRD30BQ9BXX2 1392 aa7.34□□□□□ -1.24
VCAM1-202ENST00000347652 CLUAP1Q96AJ1 413 aa7.33□□□□□ -1.24
VCAM1-202ENST00000347652 PTPRTO14522 1441 aa7.33□□□□□ -1.24
VCAM1-202ENST00000347652 SCAF1Q9H7N4 1312 aaKnown RBP7.33□□□□□ -1.24
VCAM1-202ENST00000347652 UBR1Q8IWV7 1749 aa7.33□□□□□ -1.24
VCAM1-202ENST00000347652 PLA2R1Q13018 1463 aa7.33□□□□□ -1.24
VCAM1-202ENST00000347652 CWC22Q9HCG8 908 aaKnown RBP7.33□□□□□ -1.24
VCAM1-202ENST00000347652 MYO5BQ9ULV0 1848 aa7.32□□□□□ -1.24
VCAM1-202ENST00000347652 NLRP1Q9C000 1473 aa7.32□□□□□ -1.24
VCAM1-202ENST00000347652 SPHKAPQ2M3C7 1700 aa7.31□□□□□ -1.24
VCAM1-202ENST00000347652 BRPF3Q9ULD4 1205 aa7.31□□□□□ -1.24
VCAM1-202ENST00000347652 TRPM2O94759 1503 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms