RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 PDZRN3Q9UPQ7 1066 aa12.99□□□□□ -0.33
SMG7-201ENST00000347615 CDK11BP21127 795 aaKnown RBP12.99□□□□□ -0.33
SMG7-201ENST00000347615 AMPHP49418 695 aa12.99□□□□□ -0.33
SMG7-201ENST00000347615 GNL2Q13823 731 aaKnown RBP12.98□□□□□ -0.33
SMG7-201ENST00000347615 TCP11L2Q8N4U5 519 aa12.98□□□□□ -0.33
SMG7-201ENST00000347615 GOLGA6L6A8MZA4 724 aa12.98□□□□□ -0.33
SMG7-201ENST00000347615 FBXW7Q969H0 707 aa12.98□□□□□ -0.33
SMG7-201ENST00000347615 NGDNQ8NEJ9 315 aaKnown RBP12.98□□□□□ -0.33
SMG7-201ENST00000347615 RUNDC1Q96C34 613 aa12.97□□□□□ -0.33
SMG7-201ENST00000347615 FOSBP53539 338 aa12.97□□□□□ -0.33
SMG7-201ENST00000347615 BRD4O60885 1362 aaPredicted RBP12.97□□□□□ -0.33
SMG7-201ENST00000347615 RNF214Q8ND24 703 aa12.97□□□□□ -0.33
SMG7-201ENST00000347615 NESP48681 1621 aa12.97□□□□□ -0.33
SMG7-201ENST00000347615 NPHP1O15259 732 aa12.97□□□□□ -0.33
SMG7-201ENST00000347615 CREBRFQ8IUR6 639 aa12.96□□□□□ -0.33
SMG7-201ENST00000347615 CUX1P39880 1505 aa12.96□□□□□ -0.33
SMG7-201ENST00000347615 AFAP1Q8N556 730 aa12.96□□□□□ -0.33
SMG7-201ENST00000347615 CHMP5Q9NZZ3 219 aa12.96□□□□□ -0.34
SMG7-201ENST00000347615 PRXQ9BXM0 1461 aa12.96□□□□□ -0.34
SMG7-201ENST00000347615 DIAPH1O60610 1272 aaKnown RBP12.96□□□□□ -0.34
SMG7-201ENST00000347615 HMMRO75330 724 aa12.96□□□□□ -0.34
SMG7-201ENST00000347615 DDX19BQ9UMR2 479 aa12.96□□□□□ -0.34
SMG7-201ENST00000347615 TIAM1Q13009 1591 aa12.95□□□□□ -0.34
SMG7-201ENST00000347615 CSB-PGBD3P0DP91 1061 aa12.95□□□□□ -0.34
SMG7-201ENST00000347615 PTPRGP23470 1445 aa12.95□□□□□ -0.34
SMG7-201ENST00000347615 NUTM2GQ5VZR2 741 aa12.95□□□□□ -0.34
SMG7-201ENST00000347615 SLC12A5Q9H2X9 1139 aa12.95□□□□□ -0.34
SMG7-201ENST00000347615 EXOSC9Q06265 439 aaKnown RBP12.95□□□□□ -0.34
SMG7-201ENST00000347615 SYAP1Q96A49 352 aaPredicted RBP12.94□□□□□ -0.34
SMG7-201ENST00000347615 EVC2Q86UK5 1308 aa12.94□□□□□ -0.34
SMG7-201ENST00000347615 ANO2Q9NQ90 1003 aa12.93□□□□□ -0.34
SMG7-201ENST00000347615 TRAK2O60296 914 aa12.93□□□□□ -0.34
SMG7-201ENST00000347615 TRHP20396 242 aaPredicted RBP12.93□□□□□ -0.34
SMG7-201ENST00000347615 PRG4Q92954 1404 aaPredicted RBP12.93□□□□□ -0.34
SMG7-201ENST00000347615 FYCO1Q9BQS8 1478 aa12.93□□□□□ -0.34
SMG7-201ENST00000347615 ZNF592Q92610 1267 aa12.92□□□□□ -0.34
SMG7-201ENST00000347615 PTMSP20962 102 aa12.92□□□□□ -0.34
SMG7-201ENST00000347615 RSPH4AQ5TD94 716 aa12.92□□□□□ -0.34
SMG7-201ENST00000347615 SMG6Q86US8 1419 aaKnown RBP12.92□□□□□ -0.34
SMG7-201ENST00000347615 ERICH3Q5RHP9 1530 aa12.92□□□□□ -0.34
SMG7-201ENST00000347615 NOB1Q9ULX3 412 aaKnown RBP12.92□□□□□ -0.34
SMG7-201ENST00000347615 COG3Q96JB2 828 aa12.92□□□□□ -0.34
SMG7-201ENST00000347615 RBM10P98175 930 aaKnown RBP12.91□□□□□ -0.34
SMG7-201ENST00000347615 ISY1Q9ULR0 285 aaKnown RBP12.91□□□□□ -0.34
SMG7-201ENST00000347615 HFM1A2PYH4 1435 aa12.91□□□□□ -0.34
SMG7-201ENST00000347615 CDK13Q14004 1512 aaKnown RBP12.9□□□□□ -0.34
SMG7-201ENST00000347615 CAVIN1Q6NZI2 390 aaKnown RBP12.9□□□□□ -0.34
SMG7-201ENST00000347615 KIF16BQ96L93 1317 aa12.9□□□□□ -0.34
SMG7-201ENST00000347615 R3HCC1Q9Y3T6 440 aaKnown RBP12.9□□□□□ -0.34
SMG7-201ENST00000347615 NAIPQ13075 1403 aa12.9□□□□□ -0.34
SMG7-201ENST00000347615 GORABQ5T7V8 394 aa12.9□□□□□ -0.35
SMG7-201ENST00000347615 NRDCO43847 1150 aa12.89□□□□□ -0.35
SMG7-201ENST00000347615 KDM4AO75164 1064 aa12.89□□□□□ -0.35
SMG7-201ENST00000347615 CFAP44Q96MT7 982 aa12.89□□□□□ -0.35
SMG7-201ENST00000347615 CCDC27Q2M243 656 aa12.89□□□□□ -0.35
SMG7-201ENST00000347615 FKBP5Q13451 457 aaPredicted RBP12.88□□□□□ -0.35
SMG7-201ENST00000347615 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMG7-201ENST00000347615 TOP2BQ02880 1626 aa12.88□□□□□ -0.35
SMG7-201ENST00000347615 FAM43AQ8N2R8 423 aa12.88□□□□□ -0.35
SMG7-201ENST00000347615 HDGFP51858 240 aaKnown RBP12.87□□□□□ -0.35
SMG7-201ENST00000347615 PCF11O94913 1555 aaKnown RBP12.87□□□□□ -0.35
SMG7-201ENST00000347615 VPS37CA5D8V6 355 aaPredicted RBP12.87□□□□□ -0.35
SMG7-201ENST00000347615 MAP4K4O95819 1239 aaPredicted RBP12.87□□□□□ -0.35
SMG7-201ENST00000347615 LMOD3Q0VAK6 560 aa12.87□□□□□ -0.35
SMG7-201ENST00000347615 TOMM22Q9NS69 142 aa12.86□□□□□ -0.35
SMG7-201ENST00000347615 VGFO15240 615 aaPredicted RBP12.86□□□□□ -0.35
SMG7-201ENST00000347615 PRPF40AO75400 957 aaKnown RBP12.86□□□□□ -0.35
SMG7-201ENST00000347615 NASPP49321 788 aaPredicted RBP12.86□□□□□ -0.35
SMG7-201ENST00000347615 SKOR2Q2VWA4 1001 aaPredicted RBP12.86□□□□□ -0.35
SMG7-201ENST00000347615 H3BQV1 296 aa12.85□□□□□ -0.35
SMG7-201ENST00000347615 IFFO2Q5TF58 517 aa12.85□□□□□ -0.35
SMG7-201ENST00000347615 PRKAR2BP31323 418 aa12.85□□□□□ -0.35
SMG7-201ENST00000347615 GPATCH3Q96I76 525 aa12.85□□□□□ -0.35
SMG7-201ENST00000347615 KIAA1107Q9UPP5 1409 aa12.84□□□□□ -0.35
SMG7-201ENST00000347615 THUMPD2Q9BTF0 503 aaKnown RBP12.84□□□□□ -0.35
SMG7-201ENST00000347615 DIAPH3Q9NSV4 1193 aa12.84□□□□□ -0.35
SMG7-201ENST00000347615 TAF7LQ5H9L4 462 aa12.84□□□□□ -0.35
SMG7-201ENST00000347615 MIA2Q96PC5 1412 aa12.83□□□□□ -0.35
SMG7-201ENST00000347615 PDE4CQ08493 712 aa12.83□□□□□ -0.35
SMG7-201ENST00000347615 TSPYL4Q9UJ04 414 aa12.83□□□□□ -0.35
SMG7-201ENST00000347615 DAPK1P53355 1430 aa12.83□□□□□ -0.36
SMG7-201ENST00000347615 AIMP1Q12904 312 aaKnown RBP12.83□□□□□ -0.36
SMG7-201ENST00000347615 CCAR2Q8N163 923 aaKnown RBP12.83□□□□□ -0.36
SMG7-201ENST00000347615 SF3A1Q15459 793 aaKnown RBP12.82□□□□□ -0.36
SMG7-201ENST00000347615 PHF14O94880 888 aa12.82□□□□□ -0.36
SMG7-201ENST00000347615 C9orf78Q9NZ63 289 aaPredicted RBP12.82□□□□□ -0.36
SMG7-201ENST00000347615 REC8O95072 547 aa12.81□□□□□ -0.36
SMG7-201ENST00000347615 INTS3Q68E01 1043 aaKnown RBP12.81□□□□□ -0.36
SMG7-201ENST00000347615 FAM184AQ8NB25 1140 aa12.81□□□□□ -0.36
SMG7-201ENST00000347615 DNAJC5BQ9UF47 199 aa12.81□□□□□ -0.36
SMG7-201ENST00000347615 ARHGAP5Q13017 1502 aa12.81□□□□□ -0.36
SMG7-201ENST00000347615 NEK4P51957 841 aa12.81□□□□□ -0.36
SMG7-201ENST00000347615 C9orf84Q5VXU9 1444 aa12.81□□□□□ -0.36
SMG7-201ENST00000347615 ERBINQ96RT1 1412 aa12.8□□□□□ -0.36
SMG7-201ENST00000347615 MRE11P49959 708 aa12.8□□□□□ -0.36
SMG7-201ENST00000347615 MAPKBP1O60336 1514 aa12.8□□□□□ -0.36
SMG7-201ENST00000347615 CDC45O75419 566 aa12.8□□□□□ -0.36
SMG7-201ENST00000347615 CLSTN1O94985 981 aa12.79□□□□□ -0.36
SMG7-201ENST00000347615 SLFN5Q08AF3 891 aa12.79□□□□□ -0.36
SMG7-201ENST00000347615 WWC1Q8IX03 1113 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms