RNA–Protein interactions for RNA: ENST00000346329.7

CTTN-202, Transcript of cortactin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-202ENST00000346329 RRP7AQ9Y3A4 280 aaKnown RBP20.18■□□□□ 0.82
CTTN-202ENST00000346329 FRMPD1Q5SYB0 1578 aa20.18■□□□□ 0.82
CTTN-202ENST00000346329 CENPJQ9HC77 1338 aaPredicted RBP20.17■□□□□ 0.82
CTTN-202ENST00000346329 GGNBP2Q9H3C7 697 aa20.17■□□□□ 0.82
CTTN-202ENST00000346329 VGFO15240 615 aaPredicted RBP20.16■□□□□ 0.82
CTTN-202ENST00000346329 CDCA7LQ96GN5 454 aa20.16■□□□□ 0.82
CTTN-202ENST00000346329 INO80Q9ULG1 1556 aaPredicted RBP20.16■□□□□ 0.82
CTTN-202ENST00000346329 IQGAP3Q86VI3 1631 aa20.14■□□□□ 0.81
CTTN-202ENST00000346329 UNC13BO14795 1591 aa20.14■□□□□ 0.81
CTTN-202ENST00000346329 HECW2Q9P2P5 1572 aa20.14■□□□□ 0.81
CTTN-202ENST00000346329 CARD14Q9BXL6 1004 aa20.14■□□□□ 0.81
CTTN-202ENST00000346329 PPRC1Q5VV67 1664 aaKnown RBP20.13■□□□□ 0.81
CTTN-202ENST00000346329 ZBTB7CA1YPR0 619 aa20.12■□□□□ 0.81
CTTN-202ENST00000346329 DIP2BQ9P265 1576 aa20.12■□□□□ 0.81
CTTN-202ENST00000346329 MLH3Q9UHC1 1453 aa20.11■□□□□ 0.81
CTTN-202ENST00000346329 NUTM2GQ5VZR2 741 aa20.11■□□□□ 0.81
CTTN-202ENST00000346329 KDM5CP41229 1560 aa20.1■□□□□ 0.81
CTTN-202ENST00000346329 NEO1Q92859 1461 aa20.1■□□□□ 0.81
CTTN-202ENST00000346329 KTN1Q86UP2 1357 aaKnown RBP20.1■□□□□ 0.81
CTTN-202ENST00000346329 PER1O15534 1290 aaPredicted RBP20.1■□□□□ 0.81
CTTN-202ENST00000346329 ZRANB1Q9UGI0 708 aa20.1■□□□□ 0.81
CTTN-202ENST00000346329 ZMYM3Q14202 1370 aa20.09■□□□□ 0.81
CTTN-202ENST00000346329 UHRF1BP1Q6BDS2 1440 aa20.09■□□□□ 0.81
CTTN-202ENST00000346329 ADAMTS8Q9UP79 889 aa20.09■□□□□ 0.81
CTTN-202ENST00000346329 DIP2CQ9Y2E4 1556 aa20.09■□□□□ 0.81
CTTN-202ENST00000346329 MROH1Q8NDA8 1641 aa20.08■□□□□ 0.81
CTTN-202ENST00000346329 C14orf37Q86TY3 774 aa20.08■□□□□ 0.81
CTTN-202ENST00000346329 C14orf93Q9H972 538 aaKnown RBP20.08■□□□□ 0.81
CTTN-202ENST00000346329 CABP1Q9NZU7 370 aa20.08■□□□□ 0.8
CTTN-202ENST00000346329 PLIN1O60240 522 aa20.07■□□□□ 0.8
CTTN-202ENST00000346329 LTKP29376 864 aa20.07■□□□□ 0.8
CTTN-202ENST00000346329 ABCC3O15438 1527 aa20.07■□□□□ 0.8
CTTN-202ENST00000346329 PMFBP1Q8TBY8 1022 aa20.07■□□□□ 0.8
CTTN-202ENST00000346329 BCL11AQ9H165 835 aa20.07■□□□□ 0.8
CTTN-202ENST00000346329 MORC1Q86VD1 984 aa20.06■□□□□ 0.8
CTTN-202ENST00000346329 PNISRQ8TF01 805 aaKnown RBP20.06■□□□□ 0.8
CTTN-202ENST00000346329 PLEKHH1Q9ULM0 1364 aa20.06■□□□□ 0.8
CTTN-202ENST00000346329 WDR43Q15061 677 aaKnown RBP eCLIP20.05■□□□□ 0.85e-11■□□□□ 10.1
CTTN-202ENST00000346329 PTPRTO14522 1441 aa20.05■□□□□ 0.8
CTTN-202ENST00000346329 U2SURPO15042 1029 aaKnown RBP20.05■□□□□ 0.8
CTTN-202ENST00000346329 B4GALNT3Q6L9W6 998 aa20.05■□□□□ 0.8
CTTN-202ENST00000346329 SLC52A1Q9NWF4 448 aa20.04■□□□□ 0.8
CTTN-202ENST00000346329 MYBBP1AQ9BQG0 1328 aaKnown RBP20.03■□□□□ 0.8
CTTN-202ENST00000346329 CDK19Q9BWU1 502 aa20.03■□□□□ 0.8
CTTN-202ENST00000346329 EFCAB6Q5THR3 1501 aa20.02■□□□□ 0.8
CTTN-202ENST00000346329 PPP2R1AP30153 589 aa20.02■□□□□ 0.8
CTTN-202ENST00000346329 TRPM2O94759 1503 aa20.02■□□□□ 0.8
CTTN-202ENST00000346329 ARAP3Q8WWN8 1544 aa20.02■□□□□ 0.8
CTTN-202ENST00000346329 MAGI2Q86UL8 1455 aa20.02■□□□□ 0.79
CTTN-202ENST00000346329 SPHKAPQ2M3C7 1700 aa20■□□□□ 0.79
CTTN-202ENST00000346329 XPCQ01831 940 aaPredicted RBP20■□□□□ 0.79
CTTN-202ENST00000346329 LMOD2Q6P5Q4 547 aa20■□□□□ 0.79
CTTN-202ENST00000346329 NLRP13Q86W25 1043 aa20■□□□□ 0.79
CTTN-202ENST00000346329 RNF17Q9BXT8 1623 aaKnown RBP19.99■□□□□ 0.79
CTTN-202ENST00000346329 HSPA2P54652 639 aa19.99■□□□□ 0.79
CTTN-202ENST00000346329 MROH2AA6NES4 1674 aa19.99■□□□□ 0.79
CTTN-202ENST00000346329 SCAF11Q99590 1463 aaKnown RBP19.98■□□□□ 0.79
CTTN-202ENST00000346329 AMER1Q5JTC6 1135 aaPredicted RBP19.97■□□□□ 0.79
CTTN-202ENST00000346329 TET3O43151 1660 aa19.97■□□□□ 0.79
CTTN-202ENST00000346329 TRPM1Q7Z4N2 1603 aa19.97■□□□□ 0.79
CTTN-202ENST00000346329 APAF1O14727 1248 aa19.97■□□□□ 0.79
CTTN-202ENST00000346329 MAP3K4Q9Y6R4 1608 aa19.96■□□□□ 0.79
CTTN-202ENST00000346329 MTHFSP49914 203 aa19.96■□□□□ 0.79
CTTN-202ENST00000346329 SIGLEC1Q9BZZ2 1709 aa19.96■□□□□ 0.79
CTTN-202ENST00000346329 EIF3AQ14152 1382 aaKnown RBP19.95■□□□□ 0.78
CTTN-202ENST00000346329 SKAP1Q86WV1 359 aa19.95■□□□□ 0.78
CTTN-202ENST00000346329 METP08581 1390 aa19.95■□□□□ 0.78
CTTN-202ENST00000346329 RICTORQ6R327 1708 aa19.94■□□□□ 0.78
CTTN-202ENST00000346329 CDCA8Q53HL2 280 aa19.94■□□□□ 0.78
CTTN-202ENST00000346329 PAK3O75914 559 aaPredicted RBP19.94■□□□□ 0.78
CTTN-202ENST00000346329 RALBP1Q15311 655 aa19.94■□□□□ 0.78
CTTN-202ENST00000346329 NSD3Q9BZ95 1437 aa19.94■□□□□ 0.78
CTTN-202ENST00000346329 EVC2Q86UK5 1308 aa19.93■□□□□ 0.78
CTTN-202ENST00000346329 RRS1Q15050 365 aaKnown RBP19.92■□□□□ 0.78
CTTN-202ENST00000346329 U2AF1L5P0DN76 240 aaPredicted RBP19.92■□□□□ 0.78
CTTN-202ENST00000346329 U2AF1Q01081 240 aaKnown RBP eCLIP19.92■□□□□ 0.781e-7■□□□□ 9.6
CTTN-202ENST00000346329 DNAJC5Q9H3Z4 198 aa19.92■□□□□ 0.78
CTTN-202ENST00000346329 GPRASP1Q5JY77 1395 aa19.92■□□□□ 0.78
CTTN-202ENST00000346329 BCL2L13Q9BXK5 485 aa19.91■□□□□ 0.78
CTTN-202ENST00000346329 NME9Q86XW9 330 aa19.91■□□□□ 0.78
CTTN-202ENST00000346329 SYNMO15061 1565 aa19.9■□□□□ 0.78
CTTN-202ENST00000346329 HMOX1P09601 288 aa19.9■□□□□ 0.78
CTTN-202ENST00000346329 RIMS2Q9UQ26 1411 aa19.9■□□□□ 0.78
CTTN-202ENST00000346329 TNRQ92752 1358 aa19.89■□□□□ 0.78
CTTN-202ENST00000346329 DMRT2Q9Y5R5 561 aa19.89■□□□□ 0.78
CTTN-202ENST00000346329 CLTCQ00610 1675 aaKnown RBP19.89■□□□□ 0.77
CTTN-202ENST00000346329 MADDQ8WXG6 1647 aa19.89■□□□□ 0.77
CTTN-202ENST00000346329 SLC24A1O60721 1099 aa19.89■□□□□ 0.77
CTTN-202ENST00000346329 LAS1LQ9Y4W2 734 aaKnown RBP19.89■□□□□ 0.77
CTTN-202ENST00000346329 EID1Q9Y6B2 187 aa19.88■□□□□ 0.77
CTTN-202ENST00000346329 LTV1Q96GA3 475 aaPredicted RBP19.87■□□□□ 0.77
CTTN-202ENST00000346329 AMOTL2Q9Y2J4 779 aa19.86■□□□□ 0.77
CTTN-202ENST00000346329 KIF13AQ9H1H9 1805 aa19.86■□□□□ 0.77
CTTN-202ENST00000346329 KIF1BO60333 1816 aa19.86■□□□□ 0.77
CTTN-202ENST00000346329 MYO5BQ9ULV0 1848 aa19.86■□□□□ 0.77
CTTN-202ENST00000346329 CFAP74Q9C0B2 1584 aa19.86■□□□□ 0.77
CTTN-202ENST00000346329 ERVK-7P63135 1459 aa19.85■□□□□ 0.77
CTTN-202ENST00000346329 TCERG1O14776 1098 aaKnown RBP19.85■□□□□ 0.77
CTTN-202ENST00000346329 DEPDC5O75140 1603 aa19.85■□□□□ 0.77
CTTN-202ENST00000346329 CAMSAP1Q5T5Y3 1602 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms