RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 NLRP1Q9C000 1473 aa5.76□□□□□ -1.49
CCDC66-202ENST00000341455 SLAIN1Q8ND83 568 aa5.76□□□□□ -1.49
CCDC66-202ENST00000341455 MAST1Q9Y2H9 1570 aa5.76□□□□□ -1.49
CCDC66-202ENST00000341455 MAP3K13O43283 966 aa5.75□□□□□ -1.49
CCDC66-202ENST00000341455 CEP162Q5TB80 1403 aa5.75□□□□□ -1.49
CCDC66-202ENST00000341455 PTPN23Q9H3S7 1636 aa5.75□□□□□ -1.49
CCDC66-202ENST00000341455 CDC42BPAQ5VT25 1732 aa5.75□□□□□ -1.49
CCDC66-202ENST00000341455 TIAM1Q13009 1591 aa5.75□□□□□ -1.49
CCDC66-202ENST00000341455 SAMD9LQ8IVG5 1584 aa5.75□□□□□ -1.49
CCDC66-202ENST00000341455 PLCG2P16885 1265 aa5.74□□□□□ -1.49
CCDC66-202ENST00000341455 IRX5P78411 483 aaPredicted RBP5.74□□□□□ -1.49
CCDC66-202ENST00000341455 TSPYL2Q9H2G4 693 aaPredicted RBP5.74□□□□□ -1.49
CCDC66-202ENST00000341455 SPHKAPQ2M3C7 1700 aa5.74□□□□□ -1.49
CCDC66-202ENST00000341455 EHBP1L1Q8N3D4 1523 aa5.74□□□□□ -1.49
CCDC66-202ENST00000341455 KIAA1107Q9UPP5 1409 aa5.74□□□□□ -1.49
CCDC66-202ENST00000341455 CLTCQ00610 1675 aaKnown RBP5.74□□□□□ -1.49
CCDC66-202ENST00000341455 COLQQ9Y215 455 aaPredicted RBP5.74□□□□□ -1.49
CCDC66-202ENST00000341455 NCOA2Q15596 1464 aa5.74□□□□□ -1.49
CCDC66-202ENST00000341455 STRCP1A6NGW2 1772 aa5.74□□□□□ -1.49
CCDC66-202ENST00000341455 SLIT1O75093 1534 aa5.74□□□□□ -1.49
CCDC66-202ENST00000341455 CLIP1P30622 1438 aa5.74□□□□□ -1.49
CCDC66-202ENST00000341455 VPS8Q8N3P4 1428 aa5.74□□□□□ -1.49
CCDC66-202ENST00000341455 FGD6Q6ZV73 1430 aa5.73□□□□□ -1.49
CCDC66-202ENST00000341455 SHANK2Q9UPX8 1470 aa5.73□□□□□ -1.49
CCDC66-202ENST00000341455 UGGT1Q9NYU2 1555 aa5.73□□□□□ -1.49
CCDC66-202ENST00000341455 NCOA3Q9Y6Q9 1424 aa5.73□□□□□ -1.49
CCDC66-202ENST00000341455 DAXXQ9UER7 740 aaPredicted RBP5.73□□□□□ -1.49
CCDC66-202ENST00000341455 NHSL1Q5SYE7 1610 aa5.73□□□□□ -1.49
CCDC66-202ENST00000341455 AHDC1Q5TGY3 1603 aaPredicted RBP5.73□□□□□ -1.49
CCDC66-202ENST00000341455 RTEL1-TNFRSF6BF6WH68 1400 aa5.72□□□□□ -1.49
CCDC66-202ENST00000341455 HAP1P54257 671 aaPredicted RBP5.72□□□□□ -1.49
CCDC66-202ENST00000341455 PZPP20742 1482 aa5.72□□□□□ -1.49
CCDC66-202ENST00000341455 OCEL1Q9H607 264 aa5.72□□□□□ -1.49
CCDC66-202ENST00000341455 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.72□□□□□ -1.49
CCDC66-202ENST00000341455 ARHGAP23Q9P227 1491 aa5.72□□□□□ -1.49
CCDC66-202ENST00000341455 TRIM35Q9UPQ4 493 aa5.71□□□□□ -1.5
CCDC66-202ENST00000341455 NKTRP30414 1462 aaKnown RBP5.7□□□□□ -1.5
CCDC66-202ENST00000341455 UBR1Q8IWV7 1749 aa5.7□□□□□ -1.5
CCDC66-202ENST00000341455 L3MBTL3Q96JM7 780 aaPredicted RBP5.7□□□□□ -1.5
CCDC66-202ENST00000341455 FAM135BQ49AJ0 1406 aa5.7□□□□□ -1.5
CCDC66-202ENST00000341455 ARHGEF5Q12774 1597 aa5.7□□□□□ -1.5
CCDC66-202ENST00000341455 DIP2AQ14689 1571 aa5.7□□□□□ -1.5
CCDC66-202ENST00000341455 CROCC2H7BZ55 1655 aa5.7□□□□□ -1.5
CCDC66-202ENST00000341455 TROQ12816 1431 aaPredicted RBP5.69□□□□□ -1.5
CCDC66-202ENST00000341455 PTGER2P43116 358 aa5.69□□□□□ -1.5
CCDC66-202ENST00000341455 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.69□□□□□ -1.5
CCDC66-202ENST00000341455 TPRNQ4KMQ1 711 aa5.69□□□□□ -1.5
CCDC66-202ENST00000341455 MROH1Q8NDA8 1641 aa5.68□□□□□ -1.5
CCDC66-202ENST00000341455 TRPC6Q9Y210 931 aa5.68□□□□□ -1.5
CCDC66-202ENST00000341455 LRRC7Q96NW7 1537 aa5.68□□□□□ -1.5
CCDC66-202ENST00000341455 GPATCH8Q9UKJ3 1502 aaKnown RBP5.68□□□□□ -1.5
CCDC66-202ENST00000341455 COL16A1Q07092 1604 aaPredicted RBP5.67□□□□□ -1.5
CCDC66-202ENST00000341455 RASEFQ8IZ41 740 aa5.67□□□□□ -1.5
CCDC66-202ENST00000341455 PCDHB13Q9Y5F0 798 aa5.67□□□□□ -1.5
CCDC66-202ENST00000341455 UNC13BO14795 1591 aa5.67□□□□□ -1.5
CCDC66-202ENST00000341455 NUBP1P53384 320 aa5.66□□□□□ -1.5
CCDC66-202ENST00000341455 SCAPERQ9BY12 1400 aa5.66□□□□□ -1.5
CCDC66-202ENST00000341455 COL22A1Q8NFW1 1626 aaPredicted RBP5.66□□□□□ -1.5
CCDC66-202ENST00000341455 LMTK2Q8IWU2 1503 aa5.66□□□□□ -1.5
CCDC66-202ENST00000341455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.65□□□□□ -1.5
CCDC66-202ENST00000341455 PRAG1Q86YV5 1406 aa5.65□□□□□ -1.51
CCDC66-202ENST00000341455 FAM9AQ8IZU1 332 aaPredicted RBP5.65□□□□□ -1.51
CCDC66-202ENST00000341455 TMEM106CQ9BVX2 250 aa5.65□□□□□ -1.51
CCDC66-202ENST00000341455 ARHGAP31Q2M1Z3 1444 aa5.65□□□□□ -1.51
CCDC66-202ENST00000341455 FAM212AQ96EL1 285 aa5.64□□□□□ -1.51
CCDC66-202ENST00000341455 TIMELESSQ9UNS1 1208 aa5.64□□□□□ -1.51
CCDC66-202ENST00000341455 MIA2Q96PC5 1412 aa5.64□□□□□ -1.51
CCDC66-202ENST00000341455 VSIG10Q8N0Z9 540 aa5.63□□□□□ -1.51
CCDC66-202ENST00000341455 TET3O43151 1660 aa5.63□□□□□ -1.51
CCDC66-202ENST00000341455 PRDM15P57071 1507 aaPredicted RBP5.62□□□□□ -1.51
CCDC66-202ENST00000341455 MARF1Q9Y4F3 1742 aaKnown RBP5.62□□□□□ -1.51
CCDC66-202ENST00000341455 ROBO1Q9Y6N7 1651 aa5.62□□□□□ -1.51
CCDC66-202ENST00000341455 CHRM1P11229 460 aaPredicted RBP5.62□□□□□ -1.51
CCDC66-202ENST00000341455 A2MP01023 1474 aa5.62□□□□□ -1.51
CCDC66-202ENST00000341455 ARHGAP5Q13017 1502 aa5.62□□□□□ -1.51
CCDC66-202ENST00000341455 PHLPP1O60346 1717 aa5.62□□□□□ -1.51
CCDC66-202ENST00000341455 RAPGEF3O95398 923 aa5.61□□□□□ -1.51
CCDC66-202ENST00000341455 IFNL1Q8IU54 200 aa5.61□□□□□ -1.51
CCDC66-202ENST00000341455 CHD2O14647 1828 aaKnown RBP5.61□□□□□ -1.51
CCDC66-202ENST00000341455 MIER1Q8N108 512 aa5.61□□□□□ -1.51
CCDC66-202ENST00000341455 ARXQ96QS3 562 aa5.61□□□□□ -1.51
CCDC66-202ENST00000341455 NPHP4O75161 1426 aaPredicted RBP5.61□□□□□ -1.51
CCDC66-202ENST00000341455 DCCP43146 1447 aa5.6□□□□□ -1.51
CCDC66-202ENST00000341455 ADGRL2O95490 1459 aa5.6□□□□□ -1.51
CCDC66-202ENST00000341455 IQGAP3Q86VI3 1631 aa5.6□□□□□ -1.51
CCDC66-202ENST00000341455 RGPD3A6NKT7 1758 aaPredicted RBP5.59□□□□□ -1.51
CCDC66-202ENST00000341455 RGPD4Q7Z3J3 1758 aa5.59□□□□□ -1.51
CCDC66-202ENST00000341455 TULP1O00294 542 aaPredicted RBP5.59□□□□□ -1.51
CCDC66-202ENST00000341455 MBD5Q9P267 1494 aa5.59□□□□□ -1.51
CCDC66-202ENST00000341455 EFCAB6Q5THR3 1501 aa5.59□□□□□ -1.51
CCDC66-202ENST00000341455 SYCP2Q9BX26 1530 aa5.59□□□□□ -1.51
CCDC66-202ENST00000341455 GCC2Q8IWJ2 1684 aa5.59□□□□□ -1.51
CCDC66-202ENST00000341455 RRBP1Q9P2E9 1410 aaKnown RBP5.59□□□□□ -1.51
CCDC66-202ENST00000341455 MYOM3Q5VTT5 1437 aa5.59□□□□□ -1.52
CCDC66-202ENST00000341455 ZMYM3Q14202 1370 aa5.59□□□□□ -1.52
CCDC66-202ENST00000341455 TOM1O60784 492 aa5.58□□□□□ -1.52
CCDC66-202ENST00000341455 UBTFP17480 764 aaKnown RBP5.58□□□□□ -1.52
CCDC66-202ENST00000341455 EMP3P54852 163 aa5.58□□□□□ -1.52
CCDC66-202ENST00000341455 EFCAB2Q5VUJ9 269 aa5.58□□□□□ -1.52
CCDC66-202ENST00000341455 KRTAP3-3Q9BYR6 98 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms