RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 ADAMTS8Q9UP79 889 aa27.09■■□□□ 1.93
CLPB-202ENST00000340729 OSCARQ8IYS5 282 aa27.07■■□□□ 1.92
CLPB-202ENST00000340729 PLEKHH1Q9ULM0 1364 aa27.06■■□□□ 1.92
CLPB-202ENST00000340729 PIK3C2GO75747 1445 aa27.05■■□□□ 1.92
CLPB-202ENST00000340729 C20orf194Q5TEA3 1177 aa27.05■■□□□ 1.92
CLPB-202ENST00000340729 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.05■■□□□ 1.92
CLPB-202ENST00000340729 MADDQ8WXG6 1647 aa27.05■■□□□ 1.92
CLPB-202ENST00000340729 ASXL2Q76L83 1435 aa27.04■■□□□ 1.92
CLPB-202ENST00000340729 PPP2R1AP30153 589 aa27.04■■□□□ 1.92
CLPB-202ENST00000340729 NPC1L1Q9UHC9 1359 aa27.04■■□□□ 1.92
CLPB-202ENST00000340729 ZFYVE16Q7Z3T8 1539 aa27.03■■□□□ 1.92
CLPB-202ENST00000340729 FAM161AQ3B820 660 aa27.03■■□□□ 1.92
CLPB-202ENST00000340729 EIF3AQ14152 1382 aaKnown RBP27.02■■□□□ 1.92
CLPB-202ENST00000340729 GOLGA2Q08379 1002 aa27.01■■□□□ 1.91
CLPB-202ENST00000340729 WDR43Q15061 677 aaKnown RBP eCLIP27.01■■□□□ 1.91
CLPB-202ENST00000340729 IL27Q8NEV9 243 aa27.01■■□□□ 1.91
CLPB-202ENST00000340729 AMER1Q5JTC6 1135 aaPredicted RBP27.01■■□□□ 1.91
CLPB-202ENST00000340729 KNSTRNQ9Y448 316 aa27.01■■□□□ 1.91
CLPB-202ENST00000340729 ASXL1Q8IXJ9 1541 aa27■■□□□ 1.91
CLPB-202ENST00000340729 CDCA8Q53HL2 280 aa27■■□□□ 1.91
CLPB-202ENST00000340729 STAC3Q96MF2 364 aa26.99■■□□□ 1.91
CLPB-202ENST00000340729 FANCAO15360 1455 aa26.99■■□□□ 1.91
CLPB-202ENST00000340729 SCAPERQ9BY12 1400 aa26.99■■□□□ 1.91
CLPB-202ENST00000340729 SKAP1Q86WV1 359 aa26.99■■□□□ 1.91
CLPB-202ENST00000340729 C8orf34Q49A92 452 aa26.98■■□□□ 1.91
CLPB-202ENST00000340729 TRMT2AQ8IZ69 625 aaKnown RBP26.98■■□□□ 1.91
CLPB-202ENST00000340729 SPHKAPQ2M3C7 1700 aa26.97■■□□□ 1.91
CLPB-202ENST00000340729 GSE1Q14687 1217 aa26.97■■□□□ 1.91
CLPB-202ENST00000340729 NFKBIBQ15653 356 aa26.97■■□□□ 1.91
CLPB-202ENST00000340729 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.97■■□□□ 1.91
CLPB-202ENST00000340729 SLFN5Q08AF3 891 aa26.96■■□□□ 1.91
CLPB-202ENST00000340729 INO80Q9ULG1 1556 aaPredicted RBP26.96■■□□□ 1.91
CLPB-202ENST00000340729 SCAF11Q99590 1463 aaKnown RBP26.95■■□□□ 1.9
CLPB-202ENST00000340729 MYOM1P52179 1685 aa26.94■■□□□ 1.9
CLPB-202ENST00000340729 AFAP1Q8N556 730 aa26.93■■□□□ 1.9
CLPB-202ENST00000340729 TRPM2O94759 1503 aa26.92■■□□□ 1.9
CLPB-202ENST00000340729 DAXXQ9UER7 740 aaPredicted RBP26.92■■□□□ 1.9
CLPB-202ENST00000340729 CEP152O94986 1710 aa26.92■■□□□ 1.9
CLPB-202ENST00000340729 RTEL1-TNFRSF6BF6WH68 1400 aa26.91■■□□□ 1.9
CLPB-202ENST00000340729 ATP7AQ04656 1500 aa26.91■■□□□ 1.9
CLPB-202ENST00000340729 SPAG9O60271 1321 aaKnown RBP26.91■■□□□ 1.9
CLPB-202ENST00000340729 VIRMAQ69YN4 1812 aaKnown RBP26.91■■□□□ 1.9
CLPB-202ENST00000340729 ADGRL1O94910 1474 aa26.9■■□□□ 1.9
CLPB-202ENST00000340729 NKTRP30414 1462 aaKnown RBP26.9■■□□□ 1.9
CLPB-202ENST00000340729 NGEFQ8N5V2 710 aa26.9■■□□□ 1.9
CLPB-202ENST00000340729 KIAA1210Q9ULL0 1709 aa26.9■■□□□ 1.9
CLPB-202ENST00000340729 DEPDC5O75140 1603 aa26.88■■□□□ 1.89
CLPB-202ENST00000340729 NEURL4Q96JN8 1562 aa26.86■■□□□ 1.89
CLPB-202ENST00000340729 PTPRTO14522 1441 aa26.86■■□□□ 1.89
CLPB-202ENST00000340729 KDM5AP29375 1690 aaKnown RBP26.85■■□□□ 1.89
CLPB-202ENST00000340729 NINLQ9Y2I6 1382 aa26.84■■□□□ 1.89
CLPB-202ENST00000340729 SLC24A1O60721 1099 aa26.81■■□□□ 1.88
CLPB-202ENST00000340729 E9PSI1 815 aa26.81■■□□□ 1.88
CLPB-202ENST00000340729 KIDINS220Q9ULH0 1771 aa26.8■■□□□ 1.88
CLPB-202ENST00000340729 SLC4A3P48751 1232 aa26.8■■□□□ 1.88
CLPB-202ENST00000340729 CLTCL1P53675 1640 aa26.79■■□□□ 1.88
CLPB-202ENST00000340729 NPM1P06748 294 aaKnown RBP eCLIP26.78■■□□□ 1.88
CLPB-202ENST00000340729 ANO8Q9HCE9 1232 aaPredicted RBP26.78■■□□□ 1.88
CLPB-202ENST00000340729 FRAT1Q92837 279 aaPredicted RBP26.77■■□□□ 1.88
CLPB-202ENST00000340729 CGNL1Q0VF96 1302 aa26.77■■□□□ 1.88
CLPB-202ENST00000340729 PDE3AQ14432 1141 aa26.77■■□□□ 1.88
CLPB-202ENST00000340729 CFAP74Q9C0B2 1584 aa26.76■■□□□ 1.87
CLPB-202ENST00000340729 TET3O43151 1660 aa26.75■■□□□ 1.87
CLPB-202ENST00000340729 MROH1Q8NDA8 1641 aa26.74■■□□□ 1.87
CLPB-202ENST00000340729 RGS3P49796 1198 aa26.74■■□□□ 1.87
CLPB-202ENST00000340729 SPINK5Q9NQ38 1064 aaPredicted RBP26.74■■□□□ 1.87
CLPB-202ENST00000340729 VWDEQ8N2E2 1590 aa26.73■■□□□ 1.87
CLPB-202ENST00000340729 APAF1O14727 1248 aa26.73■■□□□ 1.87
CLPB-202ENST00000340729 RTN4Q9NQC3 1192 aaKnown RBP26.73■■□□□ 1.87
CLPB-202ENST00000340729 MAPK8IP3Q9UPT6 1336 aa26.73■■□□□ 1.87
CLPB-202ENST00000340729 BRPF3Q9ULD4 1205 aa26.72■■□□□ 1.87
CLPB-202ENST00000340729 CD109Q6YHK3 1445 aa26.71■■□□□ 1.87
CLPB-202ENST00000340729 ZMYM3Q14202 1370 aa26.71■■□□□ 1.87
CLPB-202ENST00000340729 ZNF518AQ6AHZ1 1483 aa26.7■■□□□ 1.86
CLPB-202ENST00000340729 CCDC146Q8IYE0 955 aa26.7■■□□□ 1.86
CLPB-202ENST00000340729 USP19O94966 1318 aa26.7■■□□□ 1.86
CLPB-202ENST00000340729 MYOM2P54296 1465 aa26.7■■□□□ 1.86
CLPB-202ENST00000340729 BCAR3O75815 825 aa26.69■■□□□ 1.86
CLPB-202ENST00000340729 AAMPQ13685 434 aa26.69■■□□□ 1.86
CLPB-202ENST00000340729 ERVK-7P63135 1459 aa26.69■■□□□ 1.86
CLPB-202ENST00000340729 POLR3AO14802 1390 aaPredicted RBP26.68■■□□□ 1.86
CLPB-202ENST00000340729 FRAT2O75474 233 aaPredicted RBP26.67■■□□□ 1.86
CLPB-202ENST00000340729 MYO3AQ8NEV4 1616 aa26.67■■□□□ 1.86
CLPB-202ENST00000340729 MAP3K4Q9Y6R4 1608 aa26.67■■□□□ 1.86
CLPB-202ENST00000340729 IGHDP01880 384 aa26.66■■□□□ 1.86
CLPB-202ENST00000340729 CLUAP1Q96AJ1 413 aa26.65■■□□□ 1.86
CLPB-202ENST00000340729 POGZQ7Z3K3 1410 aa26.65■■□□□ 1.86
CLPB-202ENST00000340729 SBNO2Q9Y2G9 1366 aa26.64■■□□□ 1.86
CLPB-202ENST00000340729 CENPJQ9HC77 1338 aaPredicted RBP26.63■■□□□ 1.85
CLPB-202ENST00000340729 HECW2Q9P2P5 1572 aa26.63■■□□□ 1.85
CLPB-202ENST00000340729 KIF3BO15066 747 aa26.62■■□□□ 1.85
CLPB-202ENST00000340729 ABCA6Q8N139 1617 aa26.62■■□□□ 1.85
CLPB-202ENST00000340729 NLRP1Q9C000 1473 aa26.62■■□□□ 1.85
CLPB-202ENST00000340729 FRMPD1Q5SYB0 1578 aa26.6■■□□□ 1.85
CLPB-202ENST00000340729 BECN1Q14457 450 aa26.59■■□□□ 1.85
CLPB-202ENST00000340729 RIMBP3CA6NJZ7 1639 aa26.59■■□□□ 1.85
CLPB-202ENST00000340729 RIMBP3BA6NNM3 1639 aa26.59■■□□□ 1.85
CLPB-202ENST00000340729 RIMBP3Q9UFD9 1639 aa26.59■■□□□ 1.85
CLPB-202ENST00000340729 IFT172Q9UG01 1749 aa26.59■■□□□ 1.85
CLPB-202ENST00000340729 WWC1Q8IX03 1113 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms