RNA–Protein interactions for RNA: ENST00000333722.9

C12orf56-201, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best) BASIC

Gene C12orf56, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-201ENST00000333722 PRAM1Q96QH2 718 aa17.01■□□□□ 0.31
C12orf56-201ENST00000333722 MYT1Q01538 1121 aa16.99■□□□□ 0.31
C12orf56-201ENST00000333722 EVC2Q86UK5 1308 aa16.99■□□□□ 0.31
C12orf56-201ENST00000333722 HDGFL2Q7Z4V5 671 aaPredicted RBP16.98■□□□□ 0.31
C12orf56-201ENST00000333722 ELL2O00472 640 aaPredicted RBP16.98■□□□□ 0.31
C12orf56-201ENST00000333722 PDE3BQ13370 1112 aa16.98■□□□□ 0.31
C12orf56-201ENST00000333722 RALGAPBQ86X10 1494 aa16.98■□□□□ 0.31
C12orf56-201ENST00000333722 PER1O15534 1290 aaPredicted RBP16.98■□□□□ 0.31
C12orf56-201ENST00000333722 ERICH6BQ5W0A0 696 aa16.98■□□□□ 0.31
C12orf56-201ENST00000333722 FTSJ3Q8IY81 847 aaKnown RBP16.97■□□□□ 0.31
C12orf56-201ENST00000333722 ARHGEF12Q9NZN5 1544 aa16.97■□□□□ 0.31
C12orf56-201ENST00000333722 FBLN1P23142 703 aa16.97■□□□□ 0.31
C12orf56-201ENST00000333722 LMOD2Q6P5Q4 547 aa16.97■□□□□ 0.31
C12orf56-201ENST00000333722 A2MP01023 1474 aa16.97■□□□□ 0.31
C12orf56-201ENST00000333722 WDR7Q9Y4E6 1490 aa16.97■□□□□ 0.31
C12orf56-201ENST00000333722 TTC37Q6PGP7 1564 aa16.96■□□□□ 0.31
C12orf56-201ENST00000333722 TCERG1O14776 1098 aaKnown RBP16.96■□□□□ 0.31
C12orf56-201ENST00000333722 SAMD9LQ8IVG5 1584 aa16.96■□□□□ 0.31
C12orf56-201ENST00000333722 CHD1O14646 1710 aa16.96■□□□□ 0.31
C12orf56-201ENST00000333722 C20orf194Q5TEA3 1177 aa16.96■□□□□ 0.31
C12orf56-201ENST00000333722 CGNL1Q0VF96 1302 aa16.95■□□□□ 0.3
C12orf56-201ENST00000333722 SHANK2Q9UPX8 1470 aa16.95■□□□□ 0.3
C12orf56-201ENST00000333722 NOS1P29475 1434 aa16.95■□□□□ 0.3
C12orf56-201ENST00000333722 WAPLQ7Z5K2 1190 aa16.95■□□□□ 0.3
C12orf56-201ENST00000333722 COG6Q9Y2V7 657 aa16.95■□□□□ 0.3
C12orf56-201ENST00000333722 KDM5BQ9UGL1 1544 aa16.95■□□□□ 0.3
C12orf56-201ENST00000333722 TERF2IPQ9NYB0 399 aa16.94■□□□□ 0.3
C12orf56-201ENST00000333722 BCAR3O75815 825 aa16.94■□□□□ 0.3
C12orf56-201ENST00000333722 TXNDC2Q86VQ3 553 aa16.94■□□□□ 0.3
C12orf56-201ENST00000333722 CFAP65Q6ZU64 1925 aaKnown RBP16.93■□□□□ 0.3
C12orf56-201ENST00000333722 DUOX2Q9NRD8 1548 aa16.92■□□□□ 0.3
C12orf56-201ENST00000333722 CABP1Q9NZU7 370 aa16.92■□□□□ 0.3
C12orf56-201ENST00000333722 HMOX1P09601 288 aa16.91■□□□□ 0.3
C12orf56-201ENST00000333722 TCP11L2Q8N4U5 519 aa16.91■□□□□ 0.3
C12orf56-201ENST00000333722 PLA2R1Q13018 1463 aa16.91■□□□□ 0.3
C12orf56-201ENST00000333722 AMER1Q5JTC6 1135 aaPredicted RBP16.9■□□□□ 0.3
C12orf56-201ENST00000333722 PANK1Q8TE04 598 aa16.9■□□□□ 0.3
C12orf56-201ENST00000333722 CARD14Q9BXL6 1004 aa16.9■□□□□ 0.3
C12orf56-201ENST00000333722 CEBPAP49715 358 aaPredicted RBP16.89■□□□□ 0.29
C12orf56-201ENST00000333722 STAC3Q96MF2 364 aa16.89■□□□□ 0.29
C12orf56-201ENST00000333722 PAK3O75914 559 aaPredicted RBP16.89■□□□□ 0.29
C12orf56-201ENST00000333722 SMG6Q86US8 1419 aaKnown RBP16.89■□□□□ 0.29
C12orf56-201ENST00000333722 CDC42BPAQ5VT25 1732 aa16.89■□□□□ 0.29
C12orf56-201ENST00000333722 NOP58Q9Y2X3 529 aaKnown RBP16.89■□□□□ 0.29
C12orf56-201ENST00000333722 SLC4A3P48751 1232 aa16.88■□□□□ 0.29
C12orf56-201ENST00000333722 SLC26A8Q96RN1 970 aa16.88■□□□□ 0.29
C12orf56-201ENST00000333722 UHRF1BP1Q6BDS2 1440 aa16.86■□□□□ 0.29
C12orf56-201ENST00000333722 TSR2Q969E8 191 aaKnown RBP16.86■□□□□ 0.29
C12orf56-201ENST00000333722 CDK19Q9BWU1 502 aa16.86■□□□□ 0.29
C12orf56-201ENST00000333722 SMC4Q9NTJ3 1288 aa16.86■□□□□ 0.29
C12orf56-201ENST00000333722 NSD3Q9BZ95 1437 aa16.85■□□□□ 0.29
C12orf56-201ENST00000333722 LTV1Q96GA3 475 aaPredicted RBP16.85■□□□□ 0.29
C12orf56-201ENST00000333722 NUTM2GQ5VZR2 741 aa16.84■□□□□ 0.29
C12orf56-201ENST00000333722 E9PSI1 815 aa16.84■□□□□ 0.29
C12orf56-201ENST00000333722 PDE4AP27815 886 aa16.84■□□□□ 0.29
C12orf56-201ENST00000333722 C14orf93Q9H972 538 aaKnown RBP16.84■□□□□ 0.29
C12orf56-201ENST00000333722 SLC52A1Q9NWF4 448 aa16.84■□□□□ 0.29
C12orf56-201ENST00000333722 ITPRIPQ8IWB1 547 aa16.83■□□□□ 0.29
C12orf56-201ENST00000333722 ARXQ96QS3 562 aa16.83■□□□□ 0.29
C12orf56-201ENST00000333722 UGGT1Q9NYU2 1555 aa16.83■□□□□ 0.29
C12orf56-201ENST00000333722 SCAF11Q99590 1463 aaKnown RBP16.83■□□□□ 0.28
C12orf56-201ENST00000333722 RBM33Q96EV2 1170 aaKnown RBP16.82■□□□□ 0.28
C12orf56-201ENST00000333722 HDGFP51858 240 aaKnown RBP16.82■□□□□ 0.28
C12orf56-201ENST00000333722 RIPK4P57078 832 aa16.82■□□□□ 0.28
C12orf56-201ENST00000333722 RUNDC1Q96C34 613 aa16.82■□□□□ 0.28
C12orf56-201ENST00000333722 PARD3Q8TEW0 1356 aa16.81■□□□□ 0.28
C12orf56-201ENST00000333722 APBB1O00213 710 aa16.81■□□□□ 0.28
C12orf56-201ENST00000333722 NGDNQ8NEJ9 315 aaKnown RBP16.8■□□□□ 0.28
C12orf56-201ENST00000333722 ADGBQ8N7X0 1667 aa16.8■□□□□ 0.28
C12orf56-201ENST00000333722 PMFBP1Q8TBY8 1022 aa16.8■□□□□ 0.28
C12orf56-201ENST00000333722 SPINK5Q9NQ38 1064 aaPredicted RBP16.8■□□□□ 0.28
C12orf56-201ENST00000333722 DIAPH1O60610 1272 aaKnown RBP16.79■□□□□ 0.28
C12orf56-201ENST00000333722 MSH5O43196 834 aa16.79■□□□□ 0.28
C12orf56-201ENST00000333722 SPRYD3Q8NCJ5 442 aa16.79■□□□□ 0.28
C12orf56-201ENST00000333722 MYH16Q9H6N6 1097 aa16.79■□□□□ 0.28
C12orf56-201ENST00000333722 NCKAP5LQ9HCH0 1330 aa16.78■□□□□ 0.28
C12orf56-201ENST00000333722 RRS1Q15050 365 aaKnown RBP16.78■□□□□ 0.28
C12orf56-201ENST00000333722 THUMPD2Q9BTF0 503 aaKnown RBP16.78■□□□□ 0.28
C12orf56-201ENST00000333722 ARHGEF5Q12774 1597 aa16.77■□□□□ 0.28
C12orf56-201ENST00000333722 UPF2Q9HAU5 1272 aaKnown RBP16.77■□□□□ 0.28
C12orf56-201ENST00000333722 WWC1Q8IX03 1113 aa16.77■□□□□ 0.27
C12orf56-201ENST00000333722 DMRT2Q9Y5R5 561 aa16.77■□□□□ 0.27
C12orf56-201ENST00000333722 DUSP27Q5VZP5 1158 aa16.77■□□□□ 0.27
C12orf56-201ENST00000333722 EID1Q9Y6B2 187 aa16.77■□□□□ 0.27
C12orf56-201ENST00000333722 ZNF518AQ6AHZ1 1483 aa16.76■□□□□ 0.27
C12orf56-201ENST00000333722 ATP7AQ04656 1500 aa16.76■□□□□ 0.27
C12orf56-201ENST00000333722 COG3Q96JB2 828 aa16.76■□□□□ 0.27
C12orf56-201ENST00000333722 BCORL1Q5H9F3 1711 aa16.75■□□□□ 0.27
C12orf56-201ENST00000333722 ZCCHC11Q5TAX3 1644 aaKnown RBP16.75■□□□□ 0.27
C12orf56-201ENST00000333722 SLFN5Q08AF3 891 aa16.75■□□□□ 0.27
C12orf56-201ENST00000333722 PREX2Q70Z35 1606 aa16.75■□□□□ 0.27
C12orf56-201ENST00000333722 PLEKHH1Q9ULM0 1364 aa16.74■□□□□ 0.27
C12orf56-201ENST00000333722 ATP10AO60312 1499 aa16.74■□□□□ 0.27
C12orf56-201ENST00000333722 CDC42BPBQ9Y5S2 1711 aa16.74■□□□□ 0.27
C12orf56-201ENST00000333722 PRKAR2BP31323 418 aa16.74■□□□□ 0.27
C12orf56-201ENST00000333722 RTEL1-TNFRSF6BF6WH68 1400 aa16.74■□□□□ 0.27
C12orf56-201ENST00000333722 EXOSC9Q06265 439 aaKnown RBP16.74■□□□□ 0.27
C12orf56-201ENST00000333722 MYO5CQ9NQX4 1742 aa16.73■□□□□ 0.27
C12orf56-201ENST00000333722 ZRANB1Q9UGI0 708 aa16.73■□□□□ 0.27
C12orf56-201ENST00000333722 COL17A1Q9UMD9 1497 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms