RNA–Protein interactions for RNA: ENST00000333447.11

PPFIA2-201, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5 BASIC

Gene PPFIA2, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-201ENST00000333447 TMX4Q9H1E5 349 aaPredicted RBP10.04□□□□□ -0.8
PPFIA2-201ENST00000333447 IFT57Q9NWB7 429 aa10.04□□□□□ -0.8
PPFIA2-201ENST00000333447 OGFRQ9NZT2 677 aa10.03□□□□□ -0.8
PPFIA2-201ENST00000333447 ERICH4A6NGS2 130 aa10.03□□□□□ -0.8
PPFIA2-201ENST00000333447 FAM184AQ8NB25 1140 aa10.03□□□□□ -0.8
PPFIA2-201ENST00000333447 TSPY26PQ9H489 355 aa10.03□□□□□ -0.8
PPFIA2-201ENST00000333447 ZNF592Q92610 1267 aa10.03□□□□□ -0.8
PPFIA2-201ENST00000333447 OFD1O75665 1012 aa10.03□□□□□ -0.8
PPFIA2-201ENST00000333447 BRMS1Q9HCU9 246 aa10.03□□□□□ -0.8
PPFIA2-201ENST00000333447 DNAAF4Q8WXU2 420 aa10.02□□□□□ -0.8
PPFIA2-201ENST00000333447 BACH2Q9BYV9 841 aa10.02□□□□□ -0.8
PPFIA2-201ENST00000333447 VGFO15240 615 aaPredicted RBP10.02□□□□□ -0.81
PPFIA2-201ENST00000333447 LRCH2Q5VUJ6 765 aa10.02□□□□□ -0.81
PPFIA2-201ENST00000333447 NEXNQ0ZGT2 675 aa10.02□□□□□ -0.81
PPFIA2-201ENST00000333447 TPD52L1Q16890 204 aaPredicted RBP10.02□□□□□ -0.81
PPFIA2-201ENST00000333447 SWAP70Q9UH65 585 aa10.02□□□□□ -0.81
PPFIA2-201ENST00000333447 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.02□□□□□ -0.81
PPFIA2-201ENST00000333447 ROCK2O75116 1388 aaKnown RBP10.02□□□□□ -0.81
PPFIA2-201ENST00000333447 CDCA8Q53HL2 280 aa10.02□□□□□ -0.81
PPFIA2-201ENST00000333447 CCDC34Q96HJ3 373 aa10.02□□□□□ -0.81
PPFIA2-201ENST00000333447 FMNL3Q8IVF7 1028 aa10.02□□□□□ -0.81
PPFIA2-201ENST00000333447 CAGE1Q8TC20 777 aa10.02□□□□□ -0.81
PPFIA2-201ENST00000333447 ARID4AP29374 1257 aaPredicted RBP10.01□□□□□ -0.81
PPFIA2-201ENST00000333447 DHX37Q8IY37 1157 aaKnown RBP10.01□□□□□ -0.81
PPFIA2-201ENST00000333447 ANKRD20A12PQ8NF67 263 aa10.01□□□□□ -0.81
PPFIA2-201ENST00000333447 RSF1Q96T23 1441 aaPredicted RBP10.01□□□□□ -0.81
PPFIA2-201ENST00000333447 TICAM2Q86XR7 235 aa10□□□□□ -0.81
PPFIA2-201ENST00000333447 BMS1Q14692 1282 aaKnown RBP10□□□□□ -0.81
PPFIA2-201ENST00000333447 CHMP3Q9Y3E7 222 aa10□□□□□ -0.81
PPFIA2-201ENST00000333447 GOLGA6L9A6NEM1 432 aa10□□□□□ -0.81
PPFIA2-201ENST00000333447 GBP3Q9H0R5 595 aa10□□□□□ -0.81
PPFIA2-201ENST00000333447 SHTN1A0MZ66 631 aa9.99□□□□□ -0.81
PPFIA2-201ENST00000333447 KIF1CO43896 1103 aaKnown RBP9.99□□□□□ -0.81
PPFIA2-201ENST00000333447 RBM25P49756 843 aaKnown RBP9.99□□□□□ -0.81
PPFIA2-201ENST00000333447 MEX3CQ5U5Q3 659 aaKnown RBP9.99□□□□□ -0.81
PPFIA2-201ENST00000333447 NUTM1Q86Y26 1132 aa9.99□□□□□ -0.81
PPFIA2-201ENST00000333447 WDR66Q8TBY9 1149 aa9.99□□□□□ -0.81
PPFIA2-201ENST00000333447 V9GYY5 206 aaPredicted RBP9.99□□□□□ -0.81
PPFIA2-201ENST00000333447 SLC4A3P48751 1232 aa9.99□□□□□ -0.81
PPFIA2-201ENST00000333447 CNPY4Q8N129 248 aa9.99□□□□□ -0.81
PPFIA2-201ENST00000333447 CHMP4CQ96CF2 233 aa9.99□□□□□ -0.81
PPFIA2-201ENST00000333447 WRNQ14191 1432 aaPredicted RBP eCLIP9.99□□□□□ -0.81
PPFIA2-201ENST00000333447 GBP2P32456 591 aaPredicted RBP9.98□□□□□ -0.81
PPFIA2-201ENST00000333447 TMCO3Q6UWJ1 677 aa9.98□□□□□ -0.81
PPFIA2-201ENST00000333447 FILIP1Q7Z7B0 1213 aa9.98□□□□□ -0.81
PPFIA2-201ENST00000333447 MCM4P33991 863 aa9.98□□□□□ -0.81
PPFIA2-201ENST00000333447 HOMER1Q86YM7 354 aa9.98□□□□□ -0.81
PPFIA2-201ENST00000333447 GOLGA6L10A0A0M3HER8 536 aa9.97□□□□□ -0.81
PPFIA2-201ENST00000333447 POTEB2H3BUK9 544 aa9.97□□□□□ -0.81
PPFIA2-201ENST00000333447 CFAP53Q96M91 514 aa9.97□□□□□ -0.81
PPFIA2-201ENST00000333447 CGNL1Q0VF96 1302 aa9.97□□□□□ -0.81
PPFIA2-201ENST00000333447 ZFP91Q96JP5 570 aaPredicted RBP9.96□□□□□ -0.81
PPFIA2-201ENST00000333447 PAXBP1Q9Y5B6 917 aa9.96□□□□□ -0.81
PPFIA2-201ENST00000333447 A0A1B0GUA9 196 aa9.96□□□□□ -0.82
PPFIA2-201ENST00000333447 LUZP1Q86V48 1076 aa9.96□□□□□ -0.82
PPFIA2-201ENST00000333447 CEP164Q9UPV0 1460 aa9.96□□□□□ -0.82
PPFIA2-201ENST00000333447 MCM3P25205 808 aa9.95□□□□□ -0.82
PPFIA2-201ENST00000333447 MNAT1P51948 309 aa9.95□□□□□ -0.82
PPFIA2-201ENST00000333447 IPO8O15397 1037 aaKnown RBP9.95□□□□□ -0.82
PPFIA2-201ENST00000333447 AP1ARQ63HQ0 302 aa9.95□□□□□ -0.82
PPFIA2-201ENST00000333447 SEPT14Q6ZU15 432 aa9.95□□□□□ -0.82
PPFIA2-201ENST00000333447 TERF2IPQ9NYB0 399 aa9.95□□□□□ -0.82
PPFIA2-201ENST00000333447 BECN2A8MW95 431 aa9.95□□□□□ -0.82
PPFIA2-201ENST00000333447 TNNT1P13805 278 aa9.95□□□□□ -0.82
PPFIA2-201ENST00000333447 SH3BGRP55822 239 aaPredicted RBP9.95□□□□□ -0.82
PPFIA2-201ENST00000333447 KIF7Q2M1P5 1343 aa9.94□□□□□ -0.82
PPFIA2-201ENST00000333447 SMG6Q86US8 1419 aaKnown RBP9.94□□□□□ -0.82
PPFIA2-201ENST00000333447 TUBB4AP04350 444 aa9.94□□□□□ -0.82
PPFIA2-201ENST00000333447 ATP6V1AP38606 617 aa9.94□□□□□ -0.82
PPFIA2-201ENST00000333447 SMC4Q9NTJ3 1288 aa9.94□□□□□ -0.82
PPFIA2-201ENST00000333447 CWC22Q9HCG8 908 aaKnown RBP9.93□□□□□ -0.82
PPFIA2-201ENST00000333447 RNF168Q8IYW5 571 aaPredicted RBP9.93□□□□□ -0.82
PPFIA2-201ENST00000333447 CCAR2Q8N163 923 aaKnown RBP9.93□□□□□ -0.82
PPFIA2-201ENST00000333447 GBP6Q6ZN66 633 aa9.93□□□□□ -0.82
PPFIA2-201ENST00000333447 SETD5Q9C0A6 1442 aa9.93□□□□□ -0.82
PPFIA2-201ENST00000333447 PPM1EQ8WY54 764 aa9.92□□□□□ -0.82
PPFIA2-201ENST00000333447 NAT10Q9H0A0 1025 aaKnown RBP9.92□□□□□ -0.82
PPFIA2-201ENST00000333447 NEMFO60524 1076 aa9.92□□□□□ -0.82
PPFIA2-201ENST00000333447 GTF2F1P35269 517 aaKnown RBP eCLIP9.92□□□□□ -0.82
PPFIA2-201ENST00000333447 NGEFQ8N5V2 710 aa9.92□□□□□ -0.82
PPFIA2-201ENST00000333447 YY1AP1Q9H869 796 aa9.92□□□□□ -0.82
PPFIA2-201ENST00000333447 U2SURPO15042 1029 aaKnown RBP9.92□□□□□ -0.82
PPFIA2-201ENST00000333447 PRPF40AO75400 957 aaKnown RBP9.92□□□□□ -0.82
PPFIA2-201ENST00000333447 UVSSAQ2YD98 709 aa9.92□□□□□ -0.82
PPFIA2-201ENST00000333447 CCDC50Q8IVM0 306 aa9.92□□□□□ -0.82
PPFIA2-201ENST00000333447 VGLL3A8MV65 326 aa9.91□□□□□ -0.82
PPFIA2-201ENST00000333447 ZNF853P0CG23 659 aa9.91□□□□□ -0.82
PPFIA2-201ENST00000333447 MAP2K2P36507 400 aa9.91□□□□□ -0.82
PPFIA2-201ENST00000333447 ERC1Q8IUD2 1116 aa9.91□□□□□ -0.82
PPFIA2-201ENST00000333447 EZRP15311 586 aaKnown RBP9.91□□□□□ -0.82
PPFIA2-201ENST00000333447 TRDNQ13061 729 aa9.91□□□□□ -0.82
PPFIA2-201ENST00000333447 MCTP1Q6DN14 999 aa9.91□□□□□ -0.82
PPFIA2-201ENST00000333447 EXOC6Q8TAG9 804 aa9.91□□□□□ -0.82
PPFIA2-201ENST00000333447 ENOX2Q16206 610 aaKnown RBP9.9□□□□□ -0.82
PPFIA2-201ENST00000333447 CNKSR2Q8WXI2 1034 aa9.9□□□□□ -0.82
PPFIA2-201ENST00000333447 TAOK2Q9UL54 1235 aa9.9□□□□□ -0.82
PPFIA2-201ENST00000333447 CCNB3Q8WWL7 1395 aa9.9□□□□□ -0.82
PPFIA2-201ENST00000333447 TSR1Q2NL82 804 aaKnown RBP9.9□□□□□ -0.82
PPFIA2-201ENST00000333447 RPAINQ86UA6 219 aa9.9□□□□□ -0.82
PPFIA2-201ENST00000333447 RSRC1Q96IZ7 334 aaKnown RBP9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms