RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 ATP6V1DQ9Y5K8 247 aa19.58■□□□□ 0.73
SLIT3-201ENST00000332966 MCTP1Q6DN14 999 aa19.58■□□□□ 0.72
SLIT3-201ENST00000332966 KIAA1107Q9UPP5 1409 aa19.58■□□□□ 0.72
SLIT3-201ENST00000332966 EHBP1L1Q8N3D4 1523 aa19.58■□□□□ 0.72
SLIT3-201ENST00000332966 CCDC39Q9UFE4 941 aa19.58■□□□□ 0.72
SLIT3-201ENST00000332966 TNNT3P45378 269 aaPredicted RBP19.57■□□□□ 0.72
SLIT3-201ENST00000332966 STAC3Q96MF2 364 aa19.56■□□□□ 0.72
SLIT3-201ENST00000332966 LNPKQ9C0E8 428 aa19.56■□□□□ 0.72
SLIT3-201ENST00000332966 STK26Q9P289 416 aa19.55■□□□□ 0.72
SLIT3-201ENST00000332966 NAP1L2Q9ULW6 460 aaPredicted RBP19.55■□□□□ 0.72
SLIT3-201ENST00000332966 BCAR3O75815 825 aa19.54■□□□□ 0.72
SLIT3-201ENST00000332966 C14orf37Q86TY3 774 aa19.53■□□□□ 0.72
SLIT3-201ENST00000332966 STK31Q9BXU1 1019 aa19.52■□□□□ 0.72
SLIT3-201ENST00000332966 RAD54L2Q9Y4B4 1467 aa19.52■□□□□ 0.71
SLIT3-201ENST00000332966 ZNF771Q7L3S4 317 aaPredicted RBP19.52■□□□□ 0.71
SLIT3-201ENST00000332966 CIZ1Q9ULV3 898 aaPredicted RBP19.52■□□□□ 0.71
SLIT3-201ENST00000332966 TRAK1Q9UPV9 953 aa19.52■□□□□ 0.71
SLIT3-201ENST00000332966 INTS3Q68E01 1043 aaKnown RBP19.51■□□□□ 0.71
SLIT3-201ENST00000332966 GAPVD1Q14C86 1478 aa19.5■□□□□ 0.71
SLIT3-201ENST00000332966 KIF3BO15066 747 aa19.5■□□□□ 0.71
SLIT3-201ENST00000332966 CDC45O75419 566 aa19.5■□□□□ 0.71
SLIT3-201ENST00000332966 TPM4P67936 248 aa19.5■□□□□ 0.71
SLIT3-201ENST00000332966 CAVIN1Q6NZI2 390 aaKnown RBP19.49■□□□□ 0.71
SLIT3-201ENST00000332966 SPAG9O60271 1321 aaKnown RBP19.49■□□□□ 0.71
SLIT3-201ENST00000332966 API5Q9BZZ5 524 aaKnown RBP19.48■□□□□ 0.71
SLIT3-201ENST00000332966 ANKRD30BQ9BXX2 1392 aa19.48■□□□□ 0.71
SLIT3-201ENST00000332966 NCAPD3P42695 1498 aa19.48■□□□□ 0.71
SLIT3-201ENST00000332966 MBD3O95983 291 aa19.47■□□□□ 0.71
SLIT3-201ENST00000332966 SLC4A10Q6U841 1118 aa19.47■□□□□ 0.71
SLIT3-201ENST00000332966 PLEKHH2Q8IVE3 1493 aa19.47■□□□□ 0.71
SLIT3-201ENST00000332966 FOXD4L6Q3SYB3 417 aaPredicted RBP19.47■□□□□ 0.71
SLIT3-201ENST00000332966 FOXD4L3Q6VB84 417 aaPredicted RBP19.47■□□□□ 0.71
SLIT3-201ENST00000332966 SKAP1Q86WV1 359 aa19.47■□□□□ 0.71
SLIT3-201ENST00000332966 DIAPH3Q9NSV4 1193 aa19.47■□□□□ 0.71
SLIT3-201ENST00000332966 TCP11L2Q8N4U5 519 aa19.47■□□□□ 0.71
SLIT3-201ENST00000332966 ELL2O00472 640 aaPredicted RBP19.47■□□□□ 0.71
SLIT3-201ENST00000332966 HMGN5P82970 282 aaKnown RBP19.47■□□□□ 0.71
SLIT3-201ENST00000332966 RBM10P98175 930 aaKnown RBP19.46■□□□□ 0.71
SLIT3-201ENST00000332966 SLFN5Q08AF3 891 aa19.46■□□□□ 0.71
SLIT3-201ENST00000332966 GGT6Q6P531 493 aa19.46■□□□□ 0.71
SLIT3-201ENST00000332966 JPH4Q96JJ6 628 aa19.46■□□□□ 0.71
SLIT3-201ENST00000332966 C20orf194Q5TEA3 1177 aa19.45■□□□□ 0.7
SLIT3-201ENST00000332966 NBPF1Q3BBV0 1214 aa19.45■□□□□ 0.7
SLIT3-201ENST00000332966 RIPK4P57078 832 aa19.45■□□□□ 0.7
SLIT3-201ENST00000332966 SUPT6HQ7KZ85 1726 aaKnown RBP19.45■□□□□ 0.7
SLIT3-201ENST00000332966 EVC2Q86UK5 1308 aa19.44■□□□□ 0.7
SLIT3-201ENST00000332966 AQRO60306 1485 aaKnown RBP eCLIP19.44■□□□□ 0.7
SLIT3-201ENST00000332966 ROCK1Q13464 1354 aa19.44■□□□□ 0.7
SLIT3-201ENST00000332966 RABEP1Q15276 862 aa19.44■□□□□ 0.7
SLIT3-201ENST00000332966 GPATCH3Q96I76 525 aa19.44■□□□□ 0.7
SLIT3-201ENST00000332966 CHMP4AQ9BY43 222 aa19.44■□□□□ 0.7
SLIT3-201ENST00000332966 ZSCAN30Q86W11 494 aa19.44■□□□□ 0.7
SLIT3-201ENST00000332966 RILPL2Q969X0 211 aa19.44■□□□□ 0.7
SLIT3-201ENST00000332966 PCF11O94913 1555 aaKnown RBP19.42■□□□□ 0.7
SLIT3-201ENST00000332966 GOLGA6L19H0YKK7 550 aa19.42■□□□□ 0.7
SLIT3-201ENST00000332966 RNF214Q8ND24 703 aa19.42■□□□□ 0.7
SLIT3-201ENST00000332966 DAPK1P53355 1430 aa19.41■□□□□ 0.7
SLIT3-201ENST00000332966 K7ELQ4 463 aaPredicted RBP19.41■□□□□ 0.7
SLIT3-201ENST00000332966 ERCC6Q03468 1493 aa19.41■□□□□ 0.7
SLIT3-201ENST00000332966 TPM3P06753 285 aa19.4■□□□□ 0.7
SLIT3-201ENST00000332966 HDAC5Q9UQL6 1122 aa19.4■□□□□ 0.7
SLIT3-201ENST00000332966 DIAPH1O60610 1272 aaKnown RBP19.4■□□□□ 0.7
SLIT3-201ENST00000332966 PRPF40AO75400 957 aaKnown RBP19.4■□□□□ 0.7
SLIT3-201ENST00000332966 TAOK2Q9UL54 1235 aa19.4■□□□□ 0.7
SLIT3-201ENST00000332966 CT47B1P0C2W7 299 aaPredicted RBP19.39■□□□□ 0.69
SLIT3-201ENST00000332966 WDR63Q8IWG1 891 aa19.39■□□□□ 0.69
SLIT3-201ENST00000332966 MVPQ14764 893 aaKnown RBP19.39■□□□□ 0.69
SLIT3-201ENST00000332966 CWC22Q9HCG8 908 aaKnown RBP19.39■□□□□ 0.69
SLIT3-201ENST00000332966 SOX12O15370 315 aa19.39■□□□□ 0.69
SLIT3-201ENST00000332966 GCC1Q96CN9 775 aa19.39■□□□□ 0.69
SLIT3-201ENST00000332966 ERBINQ96RT1 1412 aa19.38■□□□□ 0.69
SLIT3-201ENST00000332966 SCAPERQ9BY12 1400 aa19.38■□□□□ 0.69
SLIT3-201ENST00000332966 PTPN23Q9H3S7 1636 aa19.38■□□□□ 0.69
SLIT3-201ENST00000332966 PDCL3Q9H2J4 239 aa19.38■□□□□ 0.69
SLIT3-201ENST00000332966 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
SLIT3-201ENST00000332966 TBC1D2Q9BYX2 928 aa19.37■□□□□ 0.69
SLIT3-201ENST00000332966 TSPY26PQ9H489 355 aa19.37■□□□□ 0.69
SLIT3-201ENST00000332966 RPRD2Q5VT52 1461 aaKnown RBP19.37■□□□□ 0.69
SLIT3-201ENST00000332966 BECN2A8MW95 431 aa19.37■□□□□ 0.69
SLIT3-201ENST00000332966 KIF3AQ9Y496 699 aa19.37■□□□□ 0.69
SLIT3-201ENST00000332966 UQCRHLA0A096LP55 91 aa19.37■□□□□ 0.69
SLIT3-201ENST00000332966 UQCRHP07919 91 aa19.37■□□□□ 0.69
SLIT3-201ENST00000332966 ZNF592Q92610 1267 aa19.36■□□□□ 0.69
SLIT3-201ENST00000332966 CLCN1P35523 988 aa19.36■□□□□ 0.69
SLIT3-201ENST00000332966 ANO2Q9NQ90 1003 aa19.36■□□□□ 0.69
SLIT3-201ENST00000332966 MTHFSP49914 203 aa19.35■□□□□ 0.69
SLIT3-201ENST00000332966 GNL2Q13823 731 aaKnown RBP19.35■□□□□ 0.69
SLIT3-201ENST00000332966 LETM1O95202 739 aaPredicted RBP19.35■□□□□ 0.69
SLIT3-201ENST00000332966 MCM2P49736 904 aa19.35■□□□□ 0.69
SLIT3-201ENST00000332966 GNAI1P63096 354 aa19.35■□□□□ 0.69
SLIT3-201ENST00000332966 HSP90B1P14625 803 aaKnown RBP19.35■□□□□ 0.69
SLIT3-201ENST00000332966 EXOSC9Q06265 439 aaKnown RBP19.34■□□□□ 0.69
SLIT3-201ENST00000332966 GOLGA6L1Q8N7Z2 621 aa19.34■□□□□ 0.69
SLIT3-201ENST00000332966 HDGFP51858 240 aaKnown RBP19.34■□□□□ 0.69
SLIT3-201ENST00000332966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.33■□□□□ 0.69
SLIT3-201ENST00000332966 DUSP27Q5VZP5 1158 aa19.33■□□□□ 0.68
SLIT3-201ENST00000332966 LRPPRCP42704 1394 aaKnown RBP19.32■□□□□ 0.68
SLIT3-201ENST00000332966 IFT57Q9NWB7 429 aa19.32■□□□□ 0.68
SLIT3-201ENST00000332966 SMC3Q9UQE7 1217 aa19.32■□□□□ 0.68
SLIT3-201ENST00000332966 NKTRP30414 1462 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms