RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 COG3Q96JB2 828 aa12.21□□□□□ -0.46
SS18L1-201ENST00000331758 SMC4Q9NTJ3 1288 aa12.21□□□□□ -0.46
SS18L1-201ENST00000331758 ADGRF5Q8IZF2 1346 aa12.2□□□□□ -0.46
SS18L1-201ENST00000331758 MTHFSP49914 203 aa12.2□□□□□ -0.46
SS18L1-201ENST00000331758 AMPHP49418 695 aa12.2□□□□□ -0.46
SS18L1-201ENST00000331758 RTN4Q9NQC3 1192 aaKnown RBP12.2□□□□□ -0.46
SS18L1-201ENST00000331758 ITSN2Q9NZM3 1697 aa12.19□□□□□ -0.46
SS18L1-201ENST00000331758 ELL2O00472 640 aaPredicted RBP12.19□□□□□ -0.46
SS18L1-201ENST00000331758 DHX29Q7Z478 1369 aaKnown RBP12.18□□□□□ -0.46
SS18L1-201ENST00000331758 FBXO31Q5XUX0 539 aaPredicted RBP12.18□□□□□ -0.46
SS18L1-201ENST00000331758 ITPRIPQ8IWB1 547 aa12.18□□□□□ -0.46
SS18L1-201ENST00000331758 IDI1Q13907 227 aa12.18□□□□□ -0.46
SS18L1-201ENST00000331758 ARXQ96QS3 562 aa12.18□□□□□ -0.46
SS18L1-201ENST00000331758 TXNDC2Q86VQ3 553 aa12.18□□□□□ -0.46
SS18L1-201ENST00000331758 E9PSI1 815 aa12.17□□□□□ -0.46
SS18L1-201ENST00000331758 IPO8O15397 1037 aaKnown RBP12.17□□□□□ -0.46
SS18L1-201ENST00000331758 EIF5BO60841 1220 aaKnown RBP12.17□□□□□ -0.46
SS18L1-201ENST00000331758 CALD1Q05682 793 aaKnown RBP12.17□□□□□ -0.46
SS18L1-201ENST00000331758 DIAPH1O60610 1272 aaKnown RBP12.17□□□□□ -0.46
SS18L1-201ENST00000331758 DDRGK1Q96HY6 314 aa12.17□□□□□ -0.46
SS18L1-201ENST00000331758 CRBNQ96SW2 442 aa12.16□□□□□ -0.46
SS18L1-201ENST00000331758 CHMP4BQ9H444 224 aaKnown RBP12.15□□□□□ -0.46
SS18L1-201ENST00000331758 RPGRIP1LQ68CZ1 1315 aa12.15□□□□□ -0.46
SS18L1-201ENST00000331758 WDR7Q9Y4E6 1490 aa12.15□□□□□ -0.46
SS18L1-201ENST00000331758 SLC26A8Q96RN1 970 aa12.14□□□□□ -0.47
SS18L1-201ENST00000331758 DENND4BO75064 1496 aaPredicted RBP12.14□□□□□ -0.47
SS18L1-201ENST00000331758 RUNDC1Q96C34 613 aa12.14□□□□□ -0.47
SS18L1-201ENST00000331758 CABP1Q9NZU7 370 aa12.14□□□□□ -0.47
SS18L1-201ENST00000331758 HMOX1P09601 288 aa12.14□□□□□ -0.47
SS18L1-201ENST00000331758 ABCC2Q92887 1545 aa12.14□□□□□ -0.47
SS18L1-201ENST00000331758 BECN1Q14457 450 aa12.13□□□□□ -0.47
SS18L1-201ENST00000331758 APBB1O00213 710 aa12.13□□□□□ -0.47
SS18L1-201ENST00000331758 COG6Q9Y2V7 657 aa12.13□□□□□ -0.47
SS18L1-201ENST00000331758 RIPK4P57078 832 aa12.13□□□□□ -0.47
SS18L1-201ENST00000331758 CDK19Q9BWU1 502 aa12.13□□□□□ -0.47
SS18L1-201ENST00000331758 TCERG1O14776 1098 aaKnown RBP12.13□□□□□ -0.47
SS18L1-201ENST00000331758 DNMT1P26358 1616 aaKnown RBP12.13□□□□□ -0.47
SS18L1-201ENST00000331758 PZPP20742 1482 aa12.12□□□□□ -0.47
SS18L1-201ENST00000331758 CSB-PGBD3P0DP91 1061 aa12.12□□□□□ -0.47
SS18L1-201ENST00000331758 TCP11L2Q8N4U5 519 aa12.12□□□□□ -0.47
SS18L1-201ENST00000331758 KDM5BQ9UGL1 1544 aa12.12□□□□□ -0.47
SS18L1-201ENST00000331758 NOP58Q9Y2X3 529 aaKnown RBP12.12□□□□□ -0.47
SS18L1-201ENST00000331758 FAM135AQ9P2D6 1515 aa12.12□□□□□ -0.47
SS18L1-201ENST00000331758 RWDD1Q9H446 243 aaPredicted RBP12.11□□□□□ -0.47
SS18L1-201ENST00000331758 DEKP35659 375 aaKnown RBP12.11□□□□□ -0.47
SS18L1-201ENST00000331758 DUOX2Q9NRD8 1548 aa12.11□□□□□ -0.47
SS18L1-201ENST00000331758 LMOD3Q0VAK6 560 aa12.1□□□□□ -0.47
SS18L1-201ENST00000331758 NUTM2GQ5VZR2 741 aa12.1□□□□□ -0.47
SS18L1-201ENST00000331758 NOS1P29475 1434 aa12.1□□□□□ -0.47
SS18L1-201ENST00000331758 WAPLQ7Z5K2 1190 aa12.1□□□□□ -0.47
SS18L1-201ENST00000331758 DISP3Q9P2K9 1392 aa12.09□□□□□ -0.47
SS18L1-201ENST00000331758 PMFBP1Q8TBY8 1022 aa12.09□□□□□ -0.47
SS18L1-201ENST00000331758 NGEFQ8N5V2 710 aa12.09□□□□□ -0.47
SS18L1-201ENST00000331758 SHANK2Q9UPX8 1470 aa12.09□□□□□ -0.47
SS18L1-201ENST00000331758 CEBPAP49715 358 aaPredicted RBP12.08□□□□□ -0.48
SS18L1-201ENST00000331758 SLC4A10Q6U841 1118 aa12.08□□□□□ -0.48
SS18L1-201ENST00000331758 A2MP01023 1474 aa12.07□□□□□ -0.48
SS18L1-201ENST00000331758 STK31Q9BXU1 1019 aa12.07□□□□□ -0.48
SS18L1-201ENST00000331758 OS9Q13438 667 aaPredicted RBP12.07□□□□□ -0.48
SS18L1-201ENST00000331758 ZKSCAN2Q63HK3 967 aa12.07□□□□□ -0.48
SS18L1-201ENST00000331758 THEMISQ8N1K5 641 aaPredicted RBP12.06□□□□□ -0.48
SS18L1-201ENST00000331758 PSME1Q06323 249 aa12.06□□□□□ -0.48
SS18L1-201ENST00000331758 ADGRL2O95490 1459 aa12.06□□□□□ -0.48
SS18L1-201ENST00000331758 PRAG1Q86YV5 1406 aa12.06□□□□□ -0.48
SS18L1-201ENST00000331758 NSD3Q9BZ95 1437 aa12.06□□□□□ -0.48
SS18L1-201ENST00000331758 NLRP6P59044 892 aa12.06□□□□□ -0.48
SS18L1-201ENST00000331758 C14orf93Q9H972 538 aaKnown RBP12.06□□□□□ -0.48
SS18L1-201ENST00000331758 ZNF518AQ6AHZ1 1483 aa12.05□□□□□ -0.48
SS18L1-201ENST00000331758 FANCIQ9NVI1 1328 aa12.05□□□□□ -0.48
SS18L1-201ENST00000331758 RALGAPBQ86X10 1494 aa12.05□□□□□ -0.48
SS18L1-201ENST00000331758 SCAF11Q99590 1463 aaKnown RBP12.05□□□□□ -0.48
SS18L1-201ENST00000331758 CASC1Q6TDU7 716 aa12.04□□□□□ -0.48
SS18L1-201ENST00000331758 RTEL1-TNFRSF6BF6WH68 1400 aa12.04□□□□□ -0.48
SS18L1-201ENST00000331758 PRKAR2BP31323 418 aa12.04□□□□□ -0.48
SS18L1-201ENST00000331758 PANK1Q8TE04 598 aa12.04□□□□□ -0.48
SS18L1-201ENST00000331758 CENPQQ7L2Z9 268 aaPredicted RBP12.04□□□□□ -0.48
SS18L1-201ENST00000331758 ABCC10Q5T3U5 1492 aa12.03□□□□□ -0.48
SS18L1-201ENST00000331758 ABCA8O94911 1581 aa12.03□□□□□ -0.48
SS18L1-201ENST00000331758 TESK2Q96S53 571 aa12.03□□□□□ -0.48
SS18L1-201ENST00000331758 ATAD2Q6PL18 1390 aa12.02□□□□□ -0.49
SS18L1-201ENST00000331758 KDM6BO15054 1643 aa12.02□□□□□ -0.49
SS18L1-201ENST00000331758 PDE4AP27815 886 aa12.02□□□□□ -0.49
SS18L1-201ENST00000331758 MBD5Q9P267 1494 aa12.01□□□□□ -0.49
SS18L1-201ENST00000331758 BCAR3O75815 825 aa12.01□□□□□ -0.49
SS18L1-201ENST00000331758 DZIP1LQ8IYY4 767 aaKnown RBP12.01□□□□□ -0.49
SS18L1-201ENST00000331758 SPRYD3Q8NCJ5 442 aa12.01□□□□□ -0.49
SS18L1-201ENST00000331758 CCDC61Q9Y6R9 512 aa12.01□□□□□ -0.49
SS18L1-201ENST00000331758 TSR2Q969E8 191 aaKnown RBP12.01□□□□□ -0.49
SS18L1-201ENST00000331758 NUDT16Q96DE0 195 aaKnown RBP12.01□□□□□ -0.49
SS18L1-201ENST00000331758 TEX14Q8IWB6 1497 aa12□□□□□ -0.49
SS18L1-201ENST00000331758 RRS1Q15050 365 aaKnown RBP12□□□□□ -0.49
SS18L1-201ENST00000331758 ABTB2Q8N961 1025 aa12□□□□□ -0.49
SS18L1-201ENST00000331758 NECTIN2Q92692 538 aa12□□□□□ -0.49
SS18L1-201ENST00000331758 ZNF330Q9Y3S2 320 aaPredicted RBP12□□□□□ -0.49
SS18L1-201ENST00000331758 SMG6Q86US8 1419 aaKnown RBP12□□□□□ -0.49
SS18L1-201ENST00000331758 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12□□□□□ -0.495e-7■■■□□ 18.6
SS18L1-201ENST00000331758 EXOSC9Q06265 439 aaKnown RBP11.99□□□□□ -0.49
SS18L1-201ENST00000331758 ESCO1Q5FWF5 840 aa11.99□□□□□ -0.49
SS18L1-201ENST00000331758 POGZQ7Z3K3 1410 aa11.98□□□□□ -0.49
SS18L1-201ENST00000331758 ZNF692Q9BU19 519 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms