RNA–Protein interactions for RNA: ENST00000327047.5

CLRN1-202, Transcript of clarin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN1, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-202ENST00000327047 PLEKHD1A6NEE1 506 aa9.8□□□□□ -0.84
CLRN1-202ENST00000327047 RNF123Q5XPI4 1314 aa9.79□□□□□ -0.84
CLRN1-202ENST00000327047 MAPK8IP2Q13387 824 aaPredicted RBP9.79□□□□□ -0.84
CLRN1-202ENST00000327047 RNF17Q9BXT8 1623 aaKnown RBP9.79□□□□□ -0.84
CLRN1-202ENST00000327047 PPM1GO15355 546 aaPredicted RBP9.79□□□□□ -0.84
CLRN1-202ENST00000327047 PDE4AP27815 886 aa9.79□□□□□ -0.84
CLRN1-202ENST00000327047 LRP5O75197 1615 aa9.78□□□□□ -0.84
CLRN1-202ENST00000327047 ANKRD30BQ9BXX2 1392 aa9.78□□□□□ -0.84
CLRN1-202ENST00000327047 UPF1Q92900 1129 aaKnown RBP eCLIP9.78□□□□□ -0.84
CLRN1-202ENST00000327047 ADGRL2O95490 1459 aa9.78□□□□□ -0.84
CLRN1-202ENST00000327047 GSE1Q14687 1217 aa9.78□□□□□ -0.84
CLRN1-202ENST00000327047 SYNMO15061 1565 aa9.77□□□□□ -0.84
CLRN1-202ENST00000327047 CDK12Q9NYV4 1490 aaPredicted RBP9.77□□□□□ -0.84
CLRN1-202ENST00000327047 L3MBTL2Q969R5 705 aa9.77□□□□□ -0.85
CLRN1-202ENST00000327047 TRAPPC8Q9Y2L5 1435 aa9.77□□□□□ -0.85
CLRN1-202ENST00000327047 NPATQ14207 1427 aa9.77□□□□□ -0.85
CLRN1-202ENST00000327047 C9orf84Q5VXU9 1444 aa9.77□□□□□ -0.85
CLRN1-202ENST00000327047 POLR3GLQ9BT43 218 aa9.77□□□□□ -0.85
CLRN1-202ENST00000327047 ITSN2Q9NZM3 1697 aa9.76□□□□□ -0.85
CLRN1-202ENST00000327047 TCERG1O14776 1098 aaKnown RBP9.76□□□□□ -0.85
CLRN1-202ENST00000327047 VASPP50552 380 aaPredicted RBP9.76□□□□□ -0.85
CLRN1-202ENST00000327047 ZNF777Q9ULD5 760 aaPredicted RBP9.76□□□□□ -0.85
CLRN1-202ENST00000327047 PZPP20742 1482 aa9.76□□□□□ -0.85
CLRN1-202ENST00000327047 KIF7Q2M1P5 1343 aa9.76□□□□□ -0.85
CLRN1-202ENST00000327047 CDC42BPAQ5VT25 1732 aa9.76□□□□□ -0.85
CLRN1-202ENST00000327047 EXOC6Q8TAG9 804 aa9.75□□□□□ -0.85
CLRN1-202ENST00000327047 BACH2Q9BYV9 841 aa9.75□□□□□ -0.85
CLRN1-202ENST00000327047 ATXN8OSP0DMR3 200 aa9.75□□□□□ -0.85
CLRN1-202ENST00000327047 AGLP35573 1532 aa9.75□□□□□ -0.85
CLRN1-202ENST00000327047 POLR1AO95602 1720 aaPredicted RBP9.75□□□□□ -0.85
CLRN1-202ENST00000327047 MBD5Q9P267 1494 aa9.74□□□□□ -0.85
CLRN1-202ENST00000327047 FRAT1Q92837 279 aaPredicted RBP9.74□□□□□ -0.85
CLRN1-202ENST00000327047 ZNF335Q9H4Z2 1342 aaPredicted RBP9.73□□□□□ -0.85
CLRN1-202ENST00000327047 ATP10AO60312 1499 aa9.73□□□□□ -0.85
CLRN1-202ENST00000327047 SLC4A3P48751 1232 aa9.73□□□□□ -0.85
CLRN1-202ENST00000327047 NFKBIBQ15653 356 aa9.73□□□□□ -0.85
CLRN1-202ENST00000327047 RPRD2Q5VT52 1461 aaKnown RBP9.73□□□□□ -0.85
CLRN1-202ENST00000327047 CROCC2H7BZ55 1655 aa9.73□□□□□ -0.85
CLRN1-202ENST00000327047 NBPF8Q3BBV2 869 aa9.72□□□□□ -0.85
CLRN1-202ENST00000327047 POTEAQ6S8J7 498 aa9.72□□□□□ -0.85
CLRN1-202ENST00000327047 SKAP1Q86WV1 359 aa9.72□□□□□ -0.85
CLRN1-202ENST00000327047 SHANK2Q9UPX8 1470 aa9.71□□□□□ -0.85
CLRN1-202ENST00000327047 ANKRD30AQ9BXX3 1397 aa9.71□□□□□ -0.85
CLRN1-202ENST00000327047 RAPGEF3O95398 923 aa9.71□□□□□ -0.85
CLRN1-202ENST00000327047 HNRNPMP52272 730 aaKnown RBP eCLIP9.71□□□□□ -0.85
CLRN1-202ENST00000327047 RRP1P56182 461 aaKnown RBP9.71□□□□□ -0.85
CLRN1-202ENST00000327047 ADGBQ8N7X0 1667 aa9.71□□□□□ -0.86
CLRN1-202ENST00000327047 ANKRD50Q9ULJ7 1429 aa9.7□□□□□ -0.86
CLRN1-202ENST00000327047 TMC1Q8TDI8 760 aa9.7□□□□□ -0.86
CLRN1-202ENST00000327047 SPRYD3Q8NCJ5 442 aa9.69□□□□□ -0.86
CLRN1-202ENST00000327047 DDRGK1Q96HY6 314 aa9.69□□□□□ -0.86
CLRN1-202ENST00000327047 CDC42BPBQ9Y5S2 1711 aa9.69□□□□□ -0.86
CLRN1-202ENST00000327047 MYO3AQ8NEV4 1616 aa9.69□□□□□ -0.86
CLRN1-202ENST00000327047 ARHGEF5Q12774 1597 aa9.69□□□□□ -0.86
CLRN1-202ENST00000327047 SAMD9LQ8IVG5 1584 aa9.69□□□□□ -0.86
CLRN1-202ENST00000327047 MS4A1P11836 297 aa9.68□□□□□ -0.86
CLRN1-202ENST00000327047 PNISRQ8TF01 805 aaKnown RBP9.68□□□□□ -0.86
CLRN1-202ENST00000327047 KIAA1107Q9UPP5 1409 aa9.68□□□□□ -0.86
CLRN1-202ENST00000327047 DHX29Q7Z478 1369 aaKnown RBP9.68□□□□□ -0.86
CLRN1-202ENST00000327047 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.68□□□□□ -0.86
CLRN1-202ENST00000327047 RCAN3Q9UKA8 241 aa9.67□□□□□ -0.86
CLRN1-202ENST00000327047 PIP4K2BP78356 416 aa9.67□□□□□ -0.86
CLRN1-202ENST00000327047 RSPH6AQ9H0K4 717 aa9.67□□□□□ -0.86
CLRN1-202ENST00000327047 PREX2Q70Z35 1606 aa9.67□□□□□ -0.86
CLRN1-202ENST00000327047 LRRC7Q96NW7 1537 aa9.66□□□□□ -0.86
CLRN1-202ENST00000327047 SPATA31E1Q6ZUB1 1445 aa9.66□□□□□ -0.86
CLRN1-202ENST00000327047 MYCNP04198 464 aaPredicted RBP9.66□□□□□ -0.86
CLRN1-202ENST00000327047 TSPY4P0CV99 314 aa9.66□□□□□ -0.86
CLRN1-202ENST00000327047 TSPY10P0CW01 314 aa9.66□□□□□ -0.86
CLRN1-202ENST00000327047 VWDEQ8N2E2 1590 aa9.66□□□□□ -0.86
CLRN1-202ENST00000327047 KIF15Q9NS87 1388 aa9.65□□□□□ -0.86
CLRN1-202ENST00000327047 CEP170BQ9Y4F5 1589 aaPredicted RBP9.65□□□□□ -0.86
CLRN1-202ENST00000327047 RGL2O15211 777 aa9.65□□□□□ -0.87
CLRN1-202ENST00000327047 PLIN1O60240 522 aa9.65□□□□□ -0.87
CLRN1-202ENST00000327047 RSPH4AQ5TD94 716 aa9.65□□□□□ -0.87
CLRN1-202ENST00000327047 DCAF11Q8TEB1 546 aa9.65□□□□□ -0.87
CLRN1-202ENST00000327047 KDM5DQ9BY66 1539 aa9.65□□□□□ -0.87
CLRN1-202ENST00000327047 CCDC141Q6ZP82 1450 aa9.64□□□□□ -0.87
CLRN1-202ENST00000327047 NUP155O75694 1391 aa9.64□□□□□ -0.87
CLRN1-202ENST00000327047 FRAT2O75474 233 aaPredicted RBP9.64□□□□□ -0.87
CLRN1-202ENST00000327047 ZNF326Q5BKZ1 582 aaKnown RBP9.64□□□□□ -0.87
CLRN1-202ENST00000327047 KDM5CP41229 1560 aa9.64□□□□□ -0.87
CLRN1-202ENST00000327047 FAM43AQ8N2R8 423 aa9.64□□□□□ -0.87
CLRN1-202ENST00000327047 PKNOX2Q96KN3 472 aa9.64□□□□□ -0.87
CLRN1-202ENST00000327047 FBXO3Q9UK99 471 aa9.63□□□□□ -0.87
CLRN1-202ENST00000327047 SYCP2Q9BX26 1530 aa9.62□□□□□ -0.87
CLRN1-202ENST00000327047 PLCH2O75038 1416 aa9.62□□□□□ -0.87
CLRN1-202ENST00000327047 MAST1Q9Y2H9 1570 aa9.61□□□□□ -0.87
CLRN1-202ENST00000327047 ARHGAP5Q13017 1502 aa9.61□□□□□ -0.87
CLRN1-202ENST00000327047 NEURL4Q96JN8 1562 aa9.6□□□□□ -0.87
CLRN1-202ENST00000327047 CDCA7LQ96GN5 454 aa9.6□□□□□ -0.87
CLRN1-202ENST00000327047 DEPDC5O75140 1603 aa9.6□□□□□ -0.87
CLRN1-202ENST00000327047 NHSL1Q5SYE7 1610 aa9.6□□□□□ -0.87
CLRN1-202ENST00000327047 CRBNQ96SW2 442 aa9.6□□□□□ -0.87
CLRN1-202ENST00000327047 ARID3AQ99856 593 aa9.6□□□□□ -0.87
CLRN1-202ENST00000327047 BRPF1P55201 1214 aaPredicted RBP9.59□□□□□ -0.87
CLRN1-202ENST00000327047 USP47Q96K76 1375 aa9.59□□□□□ -0.87
CLRN1-202ENST00000327047 ECM2O94769 699 aaPredicted RBP9.59□□□□□ -0.87
CLRN1-202ENST00000327047 LRPPRCP42704 1394 aaKnown RBP9.58□□□□□ -0.88
CLRN1-202ENST00000327047 ZRANB1Q9UGI0 708 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms