RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 RCCD1A6NED2 376 aa9.36□□□□□ -0.91
CBX3P1-201ENST00000325243 BLOC1S3Q6QNY0 202 aa9.36□□□□□ -0.91
CBX3P1-201ENST00000325243 P3H3Q8IVL6 736 aa9.36□□□□□ -0.91
CBX3P1-201ENST00000325243 PCDHB3Q9Y5E6 796 aa9.36□□□□□ -0.91
CBX3P1-201ENST00000325243 PRR14Q9BWN1 585 aa9.34□□□□□ -0.91
CBX3P1-201ENST00000325243 NRG2O14511 850 aaPredicted RBP9.32□□□□□ -0.92
CBX3P1-201ENST00000325243 TLL1O43897 1013 aa9.32□□□□□ -0.92
CBX3P1-201ENST00000325243 FCHSD2O94868 740 aa9.32□□□□□ -0.92
CBX3P1-201ENST00000325243 GGCXP38435 758 aa9.32□□□□□ -0.92
CBX3P1-201ENST00000325243 TRAF7Q6Q0C0 670 aa9.31□□□□□ -0.92
CBX3P1-201ENST00000325243 TMUB1Q9BVT8 246 aa9.31□□□□□ -0.92
CBX3P1-201ENST00000325243 ACTN4O43707 911 aaKnown RBP9.3□□□□□ -0.92
CBX3P1-201ENST00000325243 CFHP08603 1231 aa9.3□□□□□ -0.92
CBX3P1-201ENST00000325243 SLC10A3P09131 477 aa9.3□□□□□ -0.92
CBX3P1-201ENST00000325243 RNF223E7ERA6 249 aa9.29□□□□□ -0.92
CBX3P1-201ENST00000325243 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.28□□□□□ -0.92
CBX3P1-201ENST00000325243 KMT5BQ4FZB7 885 aa9.28□□□□□ -0.92
CBX3P1-201ENST00000325243 RBM26Q5T8P6 1007 aaKnown RBP9.28□□□□□ -0.92
CBX3P1-201ENST00000325243 PXYLP1Q8TE99 480 aa9.28□□□□□ -0.92
CBX3P1-201ENST00000325243 EMID1Q96A84 441 aaPredicted RBP9.28□□□□□ -0.92
CBX3P1-201ENST00000325243 TESPA1A2RU30 521 aaPredicted RBP9.27□□□□□ -0.93
CBX3P1-201ENST00000325243 PDZRN3Q9UPQ7 1066 aa9.27□□□□□ -0.93
CBX3P1-201ENST00000325243 OATP04181 439 aa9.25□□□□□ -0.93
CBX3P1-201ENST00000325243 FECHP22830 423 aa9.25□□□□□ -0.93
CBX3P1-201ENST00000325243 HIC1Q14526 733 aa9.25□□□□□ -0.93
CBX3P1-201ENST00000325243 METTL3Q86U44 580 aaKnown RBP9.25□□□□□ -0.93
CBX3P1-201ENST00000325243 PPEF1O14829 653 aaPredicted RBP9.24□□□□□ -0.93
CBX3P1-201ENST00000325243 GPR37O15354 613 aa9.24□□□□□ -0.93
CBX3P1-201ENST00000325243 S1PR4O95977 384 aa9.24□□□□□ -0.93
CBX3P1-201ENST00000325243 PLCB2Q00722 1185 aa9.24□□□□□ -0.93
CBX3P1-201ENST00000325243 TRIM67Q6ZTA4 783 aa9.24□□□□□ -0.93
CBX3P1-201ENST00000325243 SLC19A1P41440 591 aa9.23□□□□□ -0.93
CBX3P1-201ENST00000325243 ADH1BP00325 375 aa9.21□□□□□ -0.94
CBX3P1-201ENST00000325243 ANKLE1Q8NAG6 615 aa9.21□□□□□ -0.94
CBX3P1-201ENST00000325243 GNPATO15228 680 aa9.2□□□□□ -0.94
CBX3P1-201ENST00000325243 NR1I2O75469 434 aa9.2□□□□□ -0.94
CBX3P1-201ENST00000325243 PUS10Q3MIT2 529 aaKnown RBP9.2□□□□□ -0.94
CBX3P1-201ENST00000325243 SPRYD7Q5W111 196 aa9.2□□□□□ -0.94
CBX3P1-201ENST00000325243 LIAT1Q6ZQX7 453 aa9.19□□□□□ -0.94
CBX3P1-201ENST00000325243 SCUBE3Q8IX30 993 aa9.19□□□□□ -0.94
CBX3P1-201ENST00000325243 NLRP7Q8WX94 980 aa9.19□□□□□ -0.94
CBX3P1-201ENST00000325243 PLA2G2CQ5R387 149 aa9.17□□□□□ -0.94
CBX3P1-201ENST00000325243 SMYD5Q6GMV2 418 aa9.17□□□□□ -0.94
CBX3P1-201ENST00000325243 ZNF598Q86UK7 904 aaKnown RBP9.16□□□□□ -0.94
CBX3P1-201ENST00000325243 SLC6A16Q9GZN6 736 aa9.16□□□□□ -0.94
CBX3P1-201ENST00000325243 PHOX2BQ99453 314 aa9.15□□□□□ -0.94
CBX3P1-201ENST00000325243 DAXXQ9UER7 740 aaPredicted RBP9.15□□□□□ -0.94
CBX3P1-201ENST00000325243 RSPH4AQ5TD94 716 aa9.14□□□□□ -0.95
CBX3P1-201ENST00000325243 ZNF697Q5TEC3 545 aa9.14□□□□□ -0.95
CBX3P1-201ENST00000325243 SPSB2Q99619 263 aa9.14□□□□□ -0.95
CBX3P1-201ENST00000325243 DDX11L8A8MPP1 907 aa9.13□□□□□ -0.95
CBX3P1-201ENST00000325243 FUT2Q10981 343 aa9.13□□□□□ -0.95
CBX3P1-201ENST00000325243 RDH13Q8NBN7 331 aa9.13□□□□□ -0.95
CBX3P1-201ENST00000325243 PRR20EP86478 221 aa9.12□□□□□ -0.95
CBX3P1-201ENST00000325243 PRR20CP86479 221 aa9.12□□□□□ -0.95
CBX3P1-201ENST00000325243 PRR20DP86480 221 aa9.12□□□□□ -0.95
CBX3P1-201ENST00000325243 PRR20BP86481 221 aa9.12□□□□□ -0.95
CBX3P1-201ENST00000325243 PRR20AP86496 221 aa9.12□□□□□ -0.95
CBX3P1-201ENST00000325243 MORN1Q5T089 497 aa9.12□□□□□ -0.95
CBX3P1-201ENST00000325243 TNFRSF10AO00220 468 aa9.11□□□□□ -0.95
CBX3P1-201ENST00000325243 GDF9O60383 454 aa9.11□□□□□ -0.95
CBX3P1-201ENST00000325243 ZNF787Q6DD87 383 aa9.11□□□□□ -0.95
CBX3P1-201ENST00000325243 PKDCCQ504Y2 493 aa9.1□□□□□ -0.95
CBX3P1-201ENST00000325243 THAP11Q96EK4 314 aa9.1□□□□□ -0.95
CBX3P1-201ENST00000325243 KDM2AQ9Y2K7 1162 aa9.1□□□□□ -0.95
CBX3P1-201ENST00000325243 GCGRP47871 477 aa9.09□□□□□ -0.95
CBX3P1-201ENST00000325243 MYT1Q01538 1121 aa9.09□□□□□ -0.95
CBX3P1-201ENST00000325243 GPIHBP1Q8IV16 184 aa9.09□□□□□ -0.95
CBX3P1-201ENST00000325243 DGAT1O75907 488 aa9.08□□□□□ -0.96
CBX3P1-201ENST00000325243 ATP6V1AP38606 617 aa9.08□□□□□ -0.96
CBX3P1-201ENST00000325243 HAP1P54257 671 aaPredicted RBP9.08□□□□□ -0.96
CBX3P1-201ENST00000325243 SLC27A5Q9Y2P5 690 aa9.08□□□□□ -0.96
CBX3P1-201ENST00000325243 FAM160A2Q8N612 972 aaPredicted RBP9.07□□□□□ -0.96
CBX3P1-201ENST00000325243 FAM187AA6NFU0 413 aa9.06□□□□□ -0.96
CBX3P1-201ENST00000325243 SULF1Q8IWU6 871 aa9.06□□□□□ -0.96
CBX3P1-201ENST00000325243 PKD2L1Q9P0L9 805 aa9.06□□□□□ -0.96
CBX3P1-201ENST00000325243 FCF1Q9Y324 198 aaKnown RBP9.06□□□□□ -0.96
CBX3P1-201ENST00000325243 PRDM9Q9NQV7 894 aa9.05□□□□□ -0.96
CBX3P1-201ENST00000325243 FMNL1O95466 1100 aaPredicted RBP9.04□□□□□ -0.96
CBX3P1-201ENST00000325243 POTECB2RU33 542 aa9.03□□□□□ -0.96
CBX3P1-201ENST00000325243 FOXC1Q12948 553 aa9.03□□□□□ -0.96
CBX3P1-201ENST00000325243 RNF19BQ6ZMZ0 732 aa9.03□□□□□ -0.96
CBX3P1-201ENST00000325243 ZNF775Q96BV0 537 aaPredicted RBP9.03□□□□□ -0.96
CBX3P1-201ENST00000325243 RPIAP49247 311 aa9.02□□□□□ -0.97
CBX3P1-201ENST00000325243 BRICD5Q6PL45 260 aa9.02□□□□□ -0.97
CBX3P1-201ENST00000325243 SALL2Q9Y467 1007 aaPredicted RBP9.02□□□□□ -0.97
CBX3P1-201ENST00000325243 ST8SIA5O15466 376 aa9□□□□□ -0.97
CBX3P1-201ENST00000325243 CD46P15529 392 aa8.99□□□□□ -0.97
CBX3P1-201ENST00000325243 MAP2K5Q13163 448 aa8.99□□□□□ -0.97
CBX3P1-201ENST00000325243 LMOD2Q6P5Q4 547 aa8.99□□□□□ -0.97
CBX3P1-201ENST00000325243 AAASQ9NRG9 546 aa8.99□□□□□ -0.97
CBX3P1-201ENST00000325243 MSS51Q4VC12 460 aa8.98□□□□□ -0.97
CBX3P1-201ENST00000325243 TOR4AQ9NXH8 423 aa8.97□□□□□ -0.97
CBX3P1-201ENST00000325243 IRF6O14896 467 aa8.96□□□□□ -0.98
CBX3P1-201ENST00000325243 CD2BP2O95400 341 aaKnown RBP8.96□□□□□ -0.98
CBX3P1-201ENST00000325243 GRIPAP1Q4V328 841 aa8.96□□□□□ -0.98
CBX3P1-201ENST00000325243 MDM2Q00987 491 aaPredicted RBP8.95□□□□□ -0.98
CBX3P1-201ENST00000325243 HLA-CQ95604 372 aa8.95□□□□□ -0.98
CBX3P1-201ENST00000325243 KDM4AO75164 1064 aa8.94□□□□□ -0.98
CBX3P1-201ENST00000325243 MMP16P51512 607 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms