RNA–Protein interactions for RNA: ENST00000317552.8

MID1-201, Transcript of midline 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MID1, Length 6,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MID1-201ENST00000317552 C9orf78Q9NZ63 289 aaPredicted RBP10.56□□□□□ -0.72
MID1-201ENST00000317552 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.56□□□□□ -0.72
MID1-201ENST00000317552 SAFBQ15424 915 aaKnown RBP eCLIP10.56□□□□□ -0.72
MID1-201ENST00000317552 CGNL1Q0VF96 1302 aa10.56□□□□□ -0.72
MID1-201ENST00000317552 ZKSCAN2Q63HK3 967 aa10.56□□□□□ -0.72
MID1-201ENST00000317552 CCDC146Q8IYE0 955 aa10.56□□□□□ -0.72
MID1-201ENST00000317552 ANO2Q9NQ90 1003 aa10.56□□□□□ -0.72
MID1-201ENST00000317552 MYO6Q9UM54 1294 aa10.56□□□□□ -0.72
MID1-201ENST00000317552 WWC2Q6AWC2 1192 aa10.55□□□□□ -0.72
MID1-201ENST00000317552 BRMS1Q9HCU9 246 aa10.55□□□□□ -0.72
MID1-201ENST00000317552 DDX49Q9Y6V7 483 aaKnown RBP10.55□□□□□ -0.72
MID1-201ENST00000317552 EVC2Q86UK5 1308 aa10.55□□□□□ -0.72
MID1-201ENST00000317552 CCDC18Q5T9S5 1454 aa10.55□□□□□ -0.72
MID1-201ENST00000317552 PATL2C9JE40 543 aaKnown RBP10.55□□□□□ -0.72
MID1-201ENST00000317552 NFXL1Q6ZNB6 911 aa10.55□□□□□ -0.72
MID1-201ENST00000317552 CLUAP1Q96AJ1 413 aa10.55□□□□□ -0.72
MID1-201ENST00000317552 APPP05067 770 aa10.55□□□□□ -0.72
MID1-201ENST00000317552 CCDC173Q0VFZ6 552 aa10.55□□□□□ -0.72
MID1-201ENST00000317552 HSP90AB4PQ58FF6 505 aa10.55□□□□□ -0.72
MID1-201ENST00000317552 FBXW7Q969H0 707 aa10.55□□□□□ -0.72
MID1-201ENST00000317552 E9PSI1 815 aa10.55□□□□□ -0.72
MID1-201ENST00000317552 ANKRD45Q5TZF3 282 aa10.55□□□□□ -0.72
MID1-201ENST00000317552 RBM33Q96EV2 1170 aaKnown RBP10.55□□□□□ -0.72
MID1-201ENST00000317552 FOXD4L5Q5VV16 416 aaPredicted RBP10.54□□□□□ -0.72
MID1-201ENST00000317552 FOXD4L4Q8WXT5 416 aaPredicted RBP10.54□□□□□ -0.72
MID1-201ENST00000317552 SMARCA2P51531 1590 aa10.54□□□□□ -0.72
MID1-201ENST00000317552 MYBBP1AQ9BQG0 1328 aaKnown RBP10.54□□□□□ -0.72
MID1-201ENST00000317552 SMARCA4P51532 1647 aa10.54□□□□□ -0.72
MID1-201ENST00000317552 VPS8Q8N3P4 1428 aa10.53□□□□□ -0.72
MID1-201ENST00000317552 VGFO15240 615 aaPredicted RBP10.53□□□□□ -0.72
MID1-201ENST00000317552 RSPH6AQ9H0K4 717 aa10.53□□□□□ -0.72
MID1-201ENST00000317552 G3BP1Q13283 466 aaKnown RBP eCLIP10.53□□□□□ -0.72
MID1-201ENST00000317552 ARGLU1Q9NWB6 273 aaPredicted RBP10.53□□□□□ -0.72
MID1-201ENST00000317552 NGEFQ8N5V2 710 aa10.53□□□□□ -0.72
MID1-201ENST00000317552 XBP1P17861 261 aa10.53□□□□□ -0.72
MID1-201ENST00000317552 API5Q9BZZ5 524 aaKnown RBP10.53□□□□□ -0.72
MID1-201ENST00000317552 DCTN1Q14203 1278 aa10.52□□□□□ -0.72
MID1-201ENST00000317552 FAM161AQ3B820 660 aa10.52□□□□□ -0.72
MID1-201ENST00000317552 NOM1Q5C9Z4 860 aaKnown RBP10.52□□□□□ -0.72
MID1-201ENST00000317552 EPS15P42566 896 aa10.52□□□□□ -0.72
MID1-201ENST00000317552 HOMER1Q86YM7 354 aa10.52□□□□□ -0.73
MID1-201ENST00000317552 ERC2O15083 957 aa10.52□□□□□ -0.73
MID1-201ENST00000317552 UNC13AQ9UPW8 1703 aa10.52□□□□□ -0.73
MID1-201ENST00000317552 BICD2Q8TD16 824 aa10.52□□□□□ -0.73
MID1-201ENST00000317552 NAP1L1P55209 391 aaKnown RBP10.51□□□□□ -0.73
MID1-201ENST00000317552 HSP90AA2PQ14568 343 aaPredicted RBP10.51□□□□□ -0.73
MID1-201ENST00000317552 FBXO3Q9UK99 471 aa10.51□□□□□ -0.73
MID1-201ENST00000317552 SASS6Q6UVJ0 657 aa10.51□□□□□ -0.73
MID1-201ENST00000317552 ZNF771Q7L3S4 317 aaPredicted RBP10.51□□□□□ -0.73
MID1-201ENST00000317552 FOXD1Q16676 465 aa10.51□□□□□ -0.73
MID1-201ENST00000317552 DDX19BQ9UMR2 479 aa10.51□□□□□ -0.73
MID1-201ENST00000317552 HSP90AB2PQ58FF8 381 aa10.51□□□□□ -0.73
MID1-201ENST00000317552 ZNF592Q92610 1267 aa10.51□□□□□ -0.73
MID1-201ENST00000317552 OLFM4Q6UX06 510 aa10.5□□□□□ -0.73
MID1-201ENST00000317552 ERCC4Q92889 916 aaPredicted RBP10.5□□□□□ -0.73
MID1-201ENST00000317552 NAT10Q9H0A0 1025 aaKnown RBP10.5□□□□□ -0.73
MID1-201ENST00000317552 CCDC144AA2RUR9 1427 aa10.5□□□□□ -0.73
MID1-201ENST00000317552 CCDC73Q6ZRK6 1079 aa10.5□□□□□ -0.73
MID1-201ENST00000317552 ATAD2BQ9ULI0 1458 aa10.5□□□□□ -0.73
MID1-201ENST00000317552 SOGA1O94964 1423 aa10.49□□□□□ -0.73
MID1-201ENST00000317552 TRAK1Q9UPV9 953 aa10.49□□□□□ -0.73
MID1-201ENST00000317552 RAB3GAP2Q9H2M9 1393 aa10.49□□□□□ -0.73
MID1-201ENST00000317552 ZRSR2Q15696 482 aaKnown RBP10.49□□□□□ -0.73
MID1-201ENST00000317552 EIF2S2P20042 333 aaKnown RBP10.48□□□□□ -0.73
MID1-201ENST00000317552 RALYLQ86SE5 291 aaKnown RBP10.48□□□□□ -0.73
MID1-201ENST00000317552 WIZO95785 1651 aa10.48□□□□□ -0.73
MID1-201ENST00000317552 OFD1O75665 1012 aa10.48□□□□□ -0.73
MID1-201ENST00000317552 HNRNPMP52272 730 aaKnown RBP eCLIP10.48□□□□□ -0.73
MID1-201ENST00000317552 INTS3Q68E01 1043 aaKnown RBP10.48□□□□□ -0.73
MID1-201ENST00000317552 SMC3Q9UQE7 1217 aa10.48□□□□□ -0.73
MID1-201ENST00000317552 NINLQ9Y2I6 1382 aa10.48□□□□□ -0.73
MID1-201ENST00000317552 NUTM2DQ5VT03 806 aaPredicted RBP10.48□□□□□ -0.73
MID1-201ENST00000317552 MNS1Q8NEH6 495 aa10.48□□□□□ -0.73
MID1-201ENST00000317552 HSP90B2PQ58FF3 399 aa10.48□□□□□ -0.73
MID1-201ENST00000317552 CCDC191Q8NCU4 936 aa10.47□□□□□ -0.73
MID1-201ENST00000317552 PSME1Q06323 249 aa10.47□□□□□ -0.73
MID1-201ENST00000317552 NUCB2P80303 420 aa10.47□□□□□ -0.73
MID1-201ENST00000317552 SLC3A2P08195 630 aaKnown RBP10.47□□□□□ -0.73
MID1-201ENST00000317552 DIAPH1O60610 1272 aaKnown RBP10.46□□□□□ -0.73
MID1-201ENST00000317552 ZFYVE27Q5T4F4 411 aa10.46□□□□□ -0.73
MID1-201ENST00000317552 AEBP2Q6ZN18 517 aaPredicted RBP10.46□□□□□ -0.73
MID1-201ENST00000317552 AAMPQ13685 434 aa10.46□□□□□ -0.73
MID1-201ENST00000317552 NUTM2FA1L443 756 aa10.46□□□□□ -0.73
MID1-201ENST00000317552 SART3Q15020 963 aaKnown RBP10.46□□□□□ -0.73
MID1-201ENST00000317552 TMEM132AQ24JP5 1023 aa10.46□□□□□ -0.73
MID1-201ENST00000317552 SYTL4Q96C24 671 aaPredicted RBP10.46□□□□□ -0.73
MID1-201ENST00000317552 CCP110O43303 1012 aa10.46□□□□□ -0.74
MID1-201ENST00000317552 PSMA5P28066 241 aa10.46□□□□□ -0.74
MID1-201ENST00000317552 PIP4K2AP48426 406 aaPredicted RBP10.45□□□□□ -0.74
MID1-201ENST00000317552 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.45□□□□□ -0.74
MID1-201ENST00000317552 ANKRD18AQ8IVF6 992 aa10.45□□□□□ -0.74
MID1-201ENST00000317552 LETM1O95202 739 aaPredicted RBP10.45□□□□□ -0.74
MID1-201ENST00000317552 RRP7AQ9Y3A4 280 aaKnown RBP10.45□□□□□ -0.74
MID1-201ENST00000317552 CAGE1Q8TC20 777 aa10.45□□□□□ -0.74
MID1-201ENST00000317552 SYCP1Q15431 976 aa10.44□□□□□ -0.74
MID1-201ENST00000317552 PANK3Q9H999 370 aa10.44□□□□□ -0.74
MID1-201ENST00000317552 CCAR1Q8IX12 1150 aaKnown RBP10.44□□□□□ -0.74
MID1-201ENST00000317552 RAPGEF4Q8WZA2 1011 aa10.44□□□□□ -0.74
MID1-201ENST00000317552 SMARCE1Q969G3 411 aa10.44□□□□□ -0.74
MID1-201ENST00000317552 KIF7Q2M1P5 1343 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms