RNA–Protein interactions for RNA: ENST00000312352.11

PFKM-201, Transcript of phosphofructokinase, muscle, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFKM, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-201ENST00000312352 CCDC172P0C7W6 258 aa15.49■□□□□ 0.07
PFKM-201ENST00000312352 CALCOCO1Q9P1Z2 691 aa15.49■□□□□ 0.07
PFKM-201ENST00000312352 BRPF1P55201 1214 aaPredicted RBP15.49■□□□□ 0.07
PFKM-201ENST00000312352 SRPK2P78362 688 aaKnown RBP15.49■□□□□ 0.07
PFKM-201ENST00000312352 PRDM16Q9HAZ2 1276 aa15.49■□□□□ 0.07
PFKM-201ENST00000312352 HSP90AB3PQ58FF7 597 aa15.49■□□□□ 0.07
PFKM-201ENST00000312352 SGSM3Q96HU1 749 aa15.49■□□□□ 0.07
PFKM-201ENST00000312352 NCAPGQ9BPX3 1015 aa15.49■□□□□ 0.07
PFKM-201ENST00000312352 DHX16O60231 1041 aaKnown RBP15.48■□□□□ 0.07
PFKM-201ENST00000312352 NOP2P46087 812 aaKnown RBP15.48■□□□□ 0.07
PFKM-201ENST00000312352 SATB1Q01826 763 aa15.47■□□□□ 0.07
PFKM-201ENST00000312352 DDX11L8A8MPP1 907 aa15.47■□□□□ 0.07
PFKM-201ENST00000312352 SCRIBQ14160 1630 aa15.47■□□□□ 0.07
PFKM-201ENST00000312352 CLIP1P30622 1438 aa15.46■□□□□ 0.07
PFKM-201ENST00000312352 MAP2K1Q02750 393 aaPredicted RBP15.45■□□□□ 0.06
PFKM-201ENST00000312352 CALR3Q96L12 384 aaKnown RBP15.45■□□□□ 0.06
PFKM-201ENST00000312352 TSPYL1Q9H0U9 437 aa15.45■□□□□ 0.06
PFKM-201ENST00000312352 CHMP5Q9NZZ3 219 aa15.45■□□□□ 0.06
PFKM-201ENST00000312352 HSPA5P11021 654 aaKnown RBP15.45■□□□□ 0.06
PFKM-201ENST00000312352 SART3Q15020 963 aaKnown RBP15.45■□□□□ 0.06
PFKM-201ENST00000312352 C17orf53Q8N3J3 647 aaPredicted RBP15.45■□□□□ 0.06
PFKM-201ENST00000312352 ABCC8Q09428 1581 aa15.44■□□□□ 0.06
PFKM-201ENST00000312352 GABPB1Q06547 395 aaPredicted RBP15.44■□□□□ 0.06
PFKM-201ENST00000312352 TERF2Q15554 542 aa15.44■□□□□ 0.06
PFKM-201ENST00000312352 KANK4Q5T7N3 995 aaPredicted RBP15.44■□□□□ 0.06
PFKM-201ENST00000312352 RAD51AP2Q09MP3 1159 aa15.44■□□□□ 0.06
PFKM-201ENST00000312352 OGFRQ9NZT2 677 aa15.43■□□□□ 0.06
PFKM-201ENST00000312352 NBPF20Q3BBV1 942 aa15.43■□□□□ 0.06
PFKM-201ENST00000312352 HNRNPH2P55795 449 aaKnown RBP15.42■□□□□ 0.06
PFKM-201ENST00000312352 DRC1Q96MC2 740 aa15.42■□□□□ 0.06
PFKM-201ENST00000312352 SOGA1O94964 1423 aa15.42■□□□□ 0.06
PFKM-201ENST00000312352 SMARCA2P51531 1590 aa15.41■□□□□ 0.06
PFKM-201ENST00000312352 ICE2Q659A1 982 aa15.41■□□□□ 0.06
PFKM-201ENST00000312352 PNISRQ8TF01 805 aaKnown RBP15.41■□□□□ 0.06
PFKM-201ENST00000312352 SPINK5Q9NQ38 1064 aaPredicted RBP15.41■□□□□ 0.06
PFKM-201ENST00000312352 KDM2BQ8NHM5 1336 aa15.41■□□□□ 0.06
PFKM-201ENST00000312352 TDO2P48775 406 aa15.4■□□□□ 0.06
PFKM-201ENST00000312352 C10orf67Q8IYJ2 551 aa15.4■□□□□ 0.06
PFKM-201ENST00000312352 PSMD1Q99460 953 aa15.4■□□□□ 0.06
PFKM-201ENST00000312352 CENPQQ7L2Z9 268 aaPredicted RBP15.4■□□□□ 0.06
PFKM-201ENST00000312352 HS1BP3Q53T59 392 aa15.39■□□□□ 0.05
PFKM-201ENST00000312352 TONSLQ96HA7 1378 aa15.39■□□□□ 0.05
PFKM-201ENST00000312352 TRIM66O15016 1216 aa15.39■□□□□ 0.05
PFKM-201ENST00000312352 CNTLNQ9NXG0 1405 aa15.38■□□□□ 0.05
PFKM-201ENST00000312352 ZNF513Q8N8E2 541 aaPredicted RBP15.38■□□□□ 0.05
PFKM-201ENST00000312352 TNPO1Q92973 898 aaKnown RBP15.38■□□□□ 0.05
PFKM-201ENST00000312352 CDCA7LQ96GN5 454 aa15.38■□□□□ 0.05
PFKM-201ENST00000312352 KIAA2012Q0VF49 1180 aa15.37■□□□□ 0.05
PFKM-201ENST00000312352 RASSF4Q9H2L5 321 aa15.37■□□□□ 0.05
PFKM-201ENST00000312352 FEZ1Q99689 392 aa15.37■□□□□ 0.05
PFKM-201ENST00000312352 HMGN5P82970 282 aaKnown RBP15.37■□□□□ 0.05
PFKM-201ENST00000312352 CEP120Q8N960 986 aa15.37■□□□□ 0.05
PFKM-201ENST00000312352 PRIMPOLQ96LW4 560 aa15.37■□□□□ 0.05
PFKM-201ENST00000312352 RBSNQ9H1K0 784 aa15.37■□□□□ 0.05
PFKM-201ENST00000312352 ST7Q9NRC1 585 aa15.37■□□□□ 0.05
PFKM-201ENST00000312352 CT47B1P0C2W7 299 aaPredicted RBP15.36■□□□□ 0.05
PFKM-201ENST00000312352 ARID4AP29374 1257 aaPredicted RBP15.36■□□□□ 0.05
PFKM-201ENST00000312352 PIK3R5Q8WYR1 880 aa15.36■□□□□ 0.05
PFKM-201ENST00000312352 NOL10Q9BSC4 688 aaKnown RBP15.36■□□□□ 0.05
PFKM-201ENST00000312352 VPS8Q8N3P4 1428 aa15.36■□□□□ 0.05
PFKM-201ENST00000312352 MFAP1P55081 439 aaKnown RBP15.35■□□□□ 0.05
PFKM-201ENST00000312352 BIRC2Q13490 618 aa15.35■□□□□ 0.05
PFKM-201ENST00000312352 E2F4Q16254 413 aa15.35■□□□□ 0.05
PFKM-201ENST00000312352 SUFUQ9UMX1 484 aa15.35■□□□□ 0.05
PFKM-201ENST00000312352 GTF2F1P35269 517 aaKnown RBP eCLIP15.35■□□□□ 0.05
PFKM-201ENST00000312352 BORCS6Q96GS4 357 aa15.35■□□□□ 0.05
PFKM-201ENST00000312352 RSF1Q96T23 1441 aaPredicted RBP15.35■□□□□ 0.05
PFKM-201ENST00000312352 GUCY2CP25092 1073 aa15.34■□□□□ 0.05
PFKM-201ENST00000312352 SLC26A8Q96RN1 970 aa15.33■□□□□ 0.05
PFKM-201ENST00000312352 FOXD4L1Q9NU39 408 aa15.33■□□□□ 0.05
PFKM-201ENST00000312352 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.33■□□□□ 0.05
PFKM-201ENST00000312352 ANAPC15P60006 121 aa15.33■□□□□ 0.04
PFKM-201ENST00000312352 PDLIM2Q96JY6 352 aa15.32■□□□□ 0.04
PFKM-201ENST00000312352 CCDC39Q9UFE4 941 aa15.32■□□□□ 0.04
PFKM-201ENST00000312352 DDX49Q9Y6V7 483 aaKnown RBP15.32■□□□□ 0.04
PFKM-201ENST00000312352 DONSONQ9NYP3 566 aa15.32■□□□□ 0.04
PFKM-201ENST00000312352 RIOK3O14730 519 aaKnown RBP15.31■□□□□ 0.04
PFKM-201ENST00000312352 RUSC2Q8N2Y8 1516 aa15.31■□□□□ 0.04
PFKM-201ENST00000312352 KIF16BQ96L93 1317 aa15.31■□□□□ 0.04
PFKM-201ENST00000312352 MCM5P33992 734 aa15.3■□□□□ 0.04
PFKM-201ENST00000312352 ANKRD7Q92527 254 aa15.3■□□□□ 0.04
PFKM-201ENST00000312352 CXorf56Q9H5V9 222 aa15.3■□□□□ 0.04
PFKM-201ENST00000312352 CTNNA3Q9UI47 895 aa15.3■□□□□ 0.04
PFKM-201ENST00000312352 PPP2R5AQ15172 486 aa15.3■□□□□ 0.04
PFKM-201ENST00000312352 NINLQ9Y2I6 1382 aa15.3■□□□□ 0.04
PFKM-201ENST00000312352 CCDC88BA6NC98 1476 aa15.3■□□□□ 0.04
PFKM-201ENST00000312352 NAA30Q147X3 362 aaPredicted RBP15.3■□□□□ 0.04
PFKM-201ENST00000312352 PRPF38AQ8NAV1 312 aaKnown RBP15.3■□□□□ 0.04
PFKM-201ENST00000312352 RNF214Q8ND24 703 aa15.3■□□□□ 0.04
PFKM-201ENST00000312352 ZNF853P0CG23 659 aa15.29■□□□□ 0.04
PFKM-201ENST00000312352 LCMT1Q9UIC8 334 aa15.29■□□□□ 0.04
PFKM-201ENST00000312352 NOLC1Q14978 699 aaKnown RBP eCLIP15.29■□□□□ 0.04
PFKM-201ENST00000312352 CAVIN1Q6NZI2 390 aaKnown RBP15.28■□□□□ 0.04
PFKM-201ENST00000312352 CCDC189A1A4V9 331 aa15.28■□□□□ 0.04
PFKM-201ENST00000312352 PRIM1P49642 420 aaKnown RBP15.28■□□□□ 0.04
PFKM-201ENST00000312352 SKOR2Q2VWA4 1001 aaPredicted RBP15.28■□□□□ 0.04
PFKM-201ENST00000312352 DDX41Q9UJV9 622 aaKnown RBP15.28■□□□□ 0.04
PFKM-201ENST00000312352 LRCH2Q5VUJ6 765 aa15.27■□□□□ 0.04
PFKM-201ENST00000312352 SYT10Q6XYQ8 523 aa15.27■□□□□ 0.04
PFKM-201ENST00000312352 GBP4Q96PP9 640 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms