RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 GLI2P10070 1586 aa11.92□□□□□ -0.5
MMP3-201ENST00000299855 CASKIN1Q8WXD9 1431 aa11.91□□□□□ -0.5
MMP3-201ENST00000299855 RTL5Q5HYW3 569 aaPredicted RBP11.91□□□□□ -0.5
MMP3-201ENST00000299855 B4GALNT3Q6L9W6 998 aa11.91□□□□□ -0.5
MMP3-201ENST00000299855 PCF11O94913 1555 aaKnown RBP11.91□□□□□ -0.5
MMP3-201ENST00000299855 RNF123Q5XPI4 1314 aa11.91□□□□□ -0.5
MMP3-201ENST00000299855 PTPN23Q9H3S7 1636 aa11.91□□□□□ -0.5
MMP3-201ENST00000299855 EIF4G2P78344 907 aaKnown RBP eCLIP11.91□□□□□ -0.5
MMP3-201ENST00000299855 PRKRIP1Q9H875 184 aaPredicted RBP11.91□□□□□ -0.5
MMP3-201ENST00000299855 FGD6Q6ZV73 1430 aa11.9□□□□□ -0.5
MMP3-201ENST00000299855 EFCAB5A4FU69 1503 aa11.9□□□□□ -0.5
MMP3-201ENST00000299855 ZBTB47Q9UFB7 747 aaPredicted RBP11.9□□□□□ -0.5
MMP3-201ENST00000299855 ZCCHC11Q5TAX3 1644 aaKnown RBP11.9□□□□□ -0.51
MMP3-201ENST00000299855 A6NJR5 290 aa11.89□□□□□ -0.51
MMP3-201ENST00000299855 IGSF5Q9NSI5 407 aa11.89□□□□□ -0.51
MMP3-201ENST00000299855 TSPOAP1O95153 1857 aa11.89□□□□□ -0.51
MMP3-201ENST00000299855 MARCH6O60337 910 aa11.89□□□□□ -0.51
MMP3-201ENST00000299855 PAK3O75914 559 aaPredicted RBP11.89□□□□□ -0.51
MMP3-201ENST00000299855 HSPA5P11021 654 aaKnown RBP11.89□□□□□ -0.51
MMP3-201ENST00000299855 PROM2Q8N271 834 aa11.89□□□□□ -0.51
MMP3-201ENST00000299855 SMG6Q86US8 1419 aaKnown RBP11.89□□□□□ -0.51
MMP3-201ENST00000299855 KDM6BO15054 1643 aa11.89□□□□□ -0.51
MMP3-201ENST00000299855 FMN1Q68DA7 1419 aa11.88□□□□□ -0.51
MMP3-201ENST00000299855 HS6ST3Q8IZP7 471 aa11.87□□□□□ -0.51
MMP3-201ENST00000299855 ABCA8O94911 1581 aa11.87□□□□□ -0.51
MMP3-201ENST00000299855 EPRSP07814 1512 aaKnown RBP11.87□□□□□ -0.51
MMP3-201ENST00000299855 NAIPQ13075 1403 aa11.87□□□□□ -0.51
MMP3-201ENST00000299855 GORABQ5T7V8 394 aa11.87□□□□□ -0.51
MMP3-201ENST00000299855 KCNG1Q9UIX4 513 aa11.87□□□□□ -0.51
MMP3-201ENST00000299855 NCOA1Q15788 1441 aa11.86□□□□□ -0.51
MMP3-201ENST00000299855 TPD52L2O43399 206 aaKnown RBP11.86□□□□□ -0.51
MMP3-201ENST00000299855 POLR1AO95602 1720 aaPredicted RBP11.86□□□□□ -0.51
MMP3-201ENST00000299855 SLC4A2P04920 1241 aa11.86□□□□□ -0.51
MMP3-201ENST00000299855 ZC3H4Q9UPT8 1303 aaKnown RBP11.85□□□□□ -0.51
MMP3-201ENST00000299855 CLUAP1Q96AJ1 413 aa11.85□□□□□ -0.51
MMP3-201ENST00000299855 SGSM3Q96HU1 749 aa11.85□□□□□ -0.51
MMP3-201ENST00000299855 PPME1Q9Y570 386 aa11.85□□□□□ -0.51
MMP3-201ENST00000299855 SAMD9Q5K651 1589 aa11.85□□□□□ -0.51
MMP3-201ENST00000299855 MRS2Q9HD23 443 aa11.84□□□□□ -0.51
MMP3-201ENST00000299855 WDR7Q9Y4E6 1490 aa11.84□□□□□ -0.51
MMP3-201ENST00000299855 PPRC1Q5VV67 1664 aaKnown RBP11.84□□□□□ -0.51
MMP3-201ENST00000299855 CCDC7Q96M83 1385 aa11.84□□□□□ -0.51
MMP3-201ENST00000299855 MAP3K4Q9Y6R4 1608 aa11.83□□□□□ -0.52
MMP3-201ENST00000299855 SPDYE4A6NLX3 237 aa11.83□□□□□ -0.52
MMP3-201ENST00000299855 C11orf95C9JLR9 678 aaPredicted RBP11.83□□□□□ -0.52
MMP3-201ENST00000299855 CCDC184Q52MB2 194 aa11.83□□□□□ -0.52
MMP3-201ENST00000299855 KCNV2Q8TDN2 545 aa11.83□□□□□ -0.52
MMP3-201ENST00000299855 ANKRD62A6NC57 917 aa11.82□□□□□ -0.52
MMP3-201ENST00000299855 FAM193AP78312 1265 aa11.82□□□□□ -0.52
MMP3-201ENST00000299855 FAM9BQ8IZU0 186 aa11.82□□□□□ -0.52
MMP3-201ENST00000299855 CCDC97Q96F63 343 aaPredicted RBP11.82□□□□□ -0.52
MMP3-201ENST00000299855 SERPINA10Q9UK55 444 aa11.82□□□□□ -0.52
MMP3-201ENST00000299855 NUDCQ9Y266 331 aa11.82□□□□□ -0.52
MMP3-201ENST00000299855 PTPRKQ15262 1439 aa11.82□□□□□ -0.52
MMP3-201ENST00000299855 UNCXA6NJT0 531 aa11.82□□□□□ -0.52
MMP3-201ENST00000299855 HECW1Q76N89 1606 aa11.82□□□□□ -0.52
MMP3-201ENST00000299855 TEX14Q8IWB6 1497 aa11.82□□□□□ -0.52
MMP3-201ENST00000299855 AKNAQ7Z591 1439 aa11.81□□□□□ -0.52
MMP3-201ENST00000299855 PATL2C9JE40 543 aaKnown RBP11.81□□□□□ -0.52
MMP3-201ENST00000299855 PHF14O94880 888 aa11.81□□□□□ -0.52
MMP3-201ENST00000299855 ZMYND10O75800 440 aa11.81□□□□□ -0.52
MMP3-201ENST00000299855 RBM27Q9P2N5 1060 aaKnown RBP11.81□□□□□ -0.52
MMP3-201ENST00000299855 FHOD3Q2V2M9 1422 aa11.8□□□□□ -0.52
MMP3-201ENST00000299855 WASHC2CQ9Y4E1 1318 aa11.8□□□□□ -0.52
MMP3-201ENST00000299855 MYOM3Q5VTT5 1437 aa11.79□□□□□ -0.52
MMP3-201ENST00000299855 GTPBP6O43824 516 aaPredicted RBP11.79□□□□□ -0.52
MMP3-201ENST00000299855 TERF2IPQ9NYB0 399 aa11.79□□□□□ -0.52
MMP3-201ENST00000299855 GCC2Q8IWJ2 1684 aa11.79□□□□□ -0.52
MMP3-201ENST00000299855 TCERG1O14776 1098 aaKnown RBP11.78□□□□□ -0.52
MMP3-201ENST00000299855 KDM4CQ9H3R0 1056 aa11.78□□□□□ -0.52
MMP3-201ENST00000299855 MTUS2Q5JR59 1369 aa11.77□□□□□ -0.53
MMP3-201ENST00000299855 FOXD4L6Q3SYB3 417 aaPredicted RBP11.77□□□□□ -0.53
MMP3-201ENST00000299855 FOXD4L3Q6VB84 417 aaPredicted RBP11.77□□□□□ -0.53
MMP3-201ENST00000299855 SUGT1Q9Y2Z0 365 aa11.77□□□□□ -0.53
MMP3-201ENST00000299855 ATP10BO94823 1461 aa11.77□□□□□ -0.53
MMP3-201ENST00000299855 SUPT6HQ7KZ85 1726 aaKnown RBP11.76□□□□□ -0.53
MMP3-201ENST00000299855 SPATA31E1Q6ZUB1 1445 aa11.76□□□□□ -0.53
MMP3-201ENST00000299855 MS4A1P11836 297 aa11.76□□□□□ -0.53
MMP3-201ENST00000299855 DRC1Q96MC2 740 aa11.76□□□□□ -0.53
MMP3-201ENST00000299855 MAGI3Q5TCQ9 1506 aa11.76□□□□□ -0.53
MMP3-201ENST00000299855 CD109Q6YHK3 1445 aa11.76□□□□□ -0.53
MMP3-201ENST00000299855 ZNF777Q9ULD5 760 aaPredicted RBP11.76□□□□□ -0.53
MMP3-201ENST00000299855 ATP1B4Q9UN42 357 aaPredicted RBP11.76□□□□□ -0.53
MMP3-201ENST00000299855 RAPGEF6Q8TEU7 1601 aa11.75□□□□□ -0.53
MMP3-201ENST00000299855 NKX1-1Q15270 411 aaPredicted RBP11.75□□□□□ -0.53
MMP3-201ENST00000299855 RALBP1Q15311 655 aa11.75□□□□□ -0.53
MMP3-201ENST00000299855 ARIH1Q9Y4X5 557 aaPredicted RBP11.75□□□□□ -0.53
MMP3-201ENST00000299855 TCOF1Q13428 1488 aaKnown RBP11.75□□□□□ -0.53
MMP3-201ENST00000299855 COL17A1Q9UMD9 1497 aaPredicted RBP11.75□□□□□ -0.53
MMP3-201ENST00000299855 HMGB1P1B2RPK0 211 aaPredicted RBP11.74□□□□□ -0.53
MMP3-201ENST00000299855 ERCC3P19447 782 aa11.74□□□□□ -0.53
MMP3-201ENST00000299855 CHMP4BQ9H444 224 aaKnown RBP11.74□□□□□ -0.53
MMP3-201ENST00000299855 DENND4BO75064 1496 aaPredicted RBP11.74□□□□□ -0.53
MMP3-201ENST00000299855 APBB1IPQ7Z5R6 666 aaPredicted RBP11.73□□□□□ -0.53
MMP3-201ENST00000299855 L3MBTL2Q969R5 705 aa11.73□□□□□ -0.53
MMP3-201ENST00000299855 EHBP1L1Q8N3D4 1523 aa11.73□□□□□ -0.53
MMP3-201ENST00000299855 CLGNO14967 610 aa11.72□□□□□ -0.53
MMP3-201ENST00000299855 ONECUT3O60422 494 aaPredicted RBP11.72□□□□□ -0.53
MMP3-201ENST00000299855 MIA2Q96PC5 1412 aa11.72□□□□□ -0.53
MMP3-201ENST00000299855 KIF7Q2M1P5 1343 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms