RNA–Protein interactions for RNA: ENST00000296137.6

FYCO1-201, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FYCO1, Length 8,504 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-201ENST00000296137 PCMTD1Q96MG8 357 aaPredicted RBP13.28□□□□□ -0.28
FYCO1-201ENST00000296137 LRRCC1Q9C099 1032 aa13.28□□□□□ -0.28
FYCO1-201ENST00000296137 PLCD3Q8N3E9 789 aa13.28□□□□□ -0.28
FYCO1-201ENST00000296137 TTLL5Q6EMB2 1281 aa13.28□□□□□ -0.28
FYCO1-201ENST00000296137 CTR9Q6PD62 1173 aa13.27□□□□□ -0.28
FYCO1-201ENST00000296137 TRIM5Q9C035 493 aa13.27□□□□□ -0.28
FYCO1-201ENST00000296137 NAP1L1P55209 391 aaKnown RBP13.27□□□□□ -0.29
FYCO1-201ENST00000296137 FRAT2O75474 233 aaPredicted RBP13.27□□□□□ -0.29
FYCO1-201ENST00000296137 RRP7BPQ9NSQ0 103 aa13.27□□□□□ -0.29
FYCO1-201ENST00000296137 CHMP3Q9Y3E7 222 aa13.27□□□□□ -0.29
FYCO1-201ENST00000296137 RRP1P56182 461 aaKnown RBP13.26□□□□□ -0.29
FYCO1-201ENST00000296137 BICD2Q8TD16 824 aa13.26□□□□□ -0.29
FYCO1-201ENST00000296137 SHTN1A0MZ66 631 aa13.26□□□□□ -0.29
FYCO1-201ENST00000296137 ZSCAN30Q86W11 494 aa13.26□□□□□ -0.29
FYCO1-201ENST00000296137 DYNC1I1O14576 645 aa13.26□□□□□ -0.29
FYCO1-201ENST00000296137 CLGNO14967 610 aa13.26□□□□□ -0.29
FYCO1-201ENST00000296137 NACADO15069 1562 aa13.26□□□□□ -0.29
FYCO1-201ENST00000296137 REC8O95072 547 aa13.26□□□□□ -0.29
FYCO1-201ENST00000296137 MBD3O95983 291 aa13.26□□□□□ -0.29
FYCO1-201ENST00000296137 CPSF2Q9P2I0 782 aaKnown RBP13.26□□□□□ -0.29
FYCO1-201ENST00000296137 FBXO3Q9UK99 471 aa13.25□□□□□ -0.29
FYCO1-201ENST00000296137 MNAT1P51948 309 aa13.25□□□□□ -0.29
FYCO1-201ENST00000296137 WWC1Q8IX03 1113 aa13.25□□□□□ -0.29
FYCO1-201ENST00000296137 CCDC146Q8IYE0 955 aa13.25□□□□□ -0.29
FYCO1-201ENST00000296137 RNF214Q8ND24 703 aa13.25□□□□□ -0.29
FYCO1-201ENST00000296137 NF2P35240 595 aa13.25□□□□□ -0.29
FYCO1-201ENST00000296137 PAIP2Q9BPZ3 127 aaKnown RBP13.25□□□□□ -0.29
FYCO1-201ENST00000296137 LMOD3Q0VAK6 560 aa13.25□□□□□ -0.29
FYCO1-201ENST00000296137 CCDC9Q9Y3X0 531 aaKnown RBP13.25□□□□□ -0.29
FYCO1-201ENST00000296137 CENPJQ9HC77 1338 aaPredicted RBP13.24□□□□□ -0.29
FYCO1-201ENST00000296137 TMCO5BA8MYB1 307 aa13.24□□□□□ -0.29
FYCO1-201ENST00000296137 PPP4R3BQ5MIZ7 849 aa13.24□□□□□ -0.29
FYCO1-201ENST00000296137 GTPBP4Q9BZE4 634 aaKnown RBP13.24□□□□□ -0.29
FYCO1-201ENST00000296137 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.23□□□□□ -0.29
FYCO1-201ENST00000296137 ODF2Q5BJF6 829 aa13.23□□□□□ -0.29
FYCO1-201ENST00000296137 SENP3Q9H4L4 574 aaPredicted RBP13.23□□□□□ -0.29
FYCO1-201ENST00000296137 ENOX2Q16206 610 aaKnown RBP13.23□□□□□ -0.29
FYCO1-201ENST00000296137 LMOD2Q6P5Q4 547 aa13.23□□□□□ -0.29
FYCO1-201ENST00000296137 DHX37Q8IY37 1157 aaKnown RBP13.23□□□□□ -0.29
FYCO1-201ENST00000296137 STK31Q9BXU1 1019 aa13.23□□□□□ -0.29
FYCO1-201ENST00000296137 SMC4Q9NTJ3 1288 aa13.23□□□□□ -0.29
FYCO1-201ENST00000296137 ERLIN2O94905 339 aa13.23□□□□□ -0.29
FYCO1-201ENST00000296137 SIN3AQ96ST3 1273 aa13.23□□□□□ -0.29
FYCO1-201ENST00000296137 TMF1P82094 1093 aa13.23□□□□□ -0.29
FYCO1-201ENST00000296137 CCDC91Q7Z6B0 441 aa13.23□□□□□ -0.29
FYCO1-201ENST00000296137 DNAAF4Q8WXU2 420 aa13.23□□□□□ -0.29
FYCO1-201ENST00000296137 NBPF1Q3BBV0 1214 aa13.22□□□□□ -0.29
FYCO1-201ENST00000296137 LUZP1Q86V48 1076 aa13.22□□□□□ -0.29
FYCO1-201ENST00000296137 SPC24Q8NBT2 197 aa13.22□□□□□ -0.29
FYCO1-201ENST00000296137 SPATA24Q86W54 205 aa13.22□□□□□ -0.29
FYCO1-201ENST00000296137 KIAA1328Q86T90 577 aa13.22□□□□□ -0.29
FYCO1-201ENST00000296137 KIF27Q86VH2 1401 aa13.22□□□□□ -0.29
FYCO1-201ENST00000296137 RBM33Q96EV2 1170 aaKnown RBP13.22□□□□□ -0.29
FYCO1-201ENST00000296137 SARNPP82979 210 aaKnown RBP13.21□□□□□ -0.29
FYCO1-201ENST00000296137 CCDC102AQ96A19 550 aa13.21□□□□□ -0.29
FYCO1-201ENST00000296137 CEP164Q9UPV0 1460 aa13.21□□□□□ -0.29
FYCO1-201ENST00000296137 KANK1Q14678 1352 aa13.21□□□□□ -0.29
FYCO1-201ENST00000296137 RABEP1Q15276 862 aa13.21□□□□□ -0.29
FYCO1-201ENST00000296137 IQCEQ6IPM2 695 aa13.21□□□□□ -0.29
FYCO1-201ENST00000296137 TMCO3Q6UWJ1 677 aa13.21□□□□□ -0.29
FYCO1-201ENST00000296137 MICALCLQ6ZW33 695 aa13.21□□□□□ -0.29
FYCO1-201ENST00000296137 PDILTQ8N807 584 aa13.21□□□□□ -0.29
FYCO1-201ENST00000296137 FHAD1B1AJZ9 1412 aa13.21□□□□□ -0.29
FYCO1-201ENST00000296137 SETSIPP0DME0 302 aa13.21□□□□□ -0.3
FYCO1-201ENST00000296137 TRERF1Q96PN7 1200 aa13.21□□□□□ -0.3
FYCO1-201ENST00000296137 GOLGA6L10A0A0M3HER8 536 aa13.2□□□□□ -0.3
FYCO1-201ENST00000296137 HDGFP51858 240 aaKnown RBP13.2□□□□□ -0.3
FYCO1-201ENST00000296137 PAK3O75914 559 aaPredicted RBP13.2□□□□□ -0.3
FYCO1-201ENST00000296137 OLFM4Q6UX06 510 aa13.2□□□□□ -0.3
FYCO1-201ENST00000296137 NOL10Q9BSC4 688 aaKnown RBP13.2□□□□□ -0.3
FYCO1-201ENST00000296137 C22orf23Q9BZE7 217 aa13.19□□□□□ -0.3
FYCO1-201ENST00000296137 TXLNBQ8N3L3 684 aa13.19□□□□□ -0.3
FYCO1-201ENST00000296137 SLC26A8Q96RN1 970 aa13.19□□□□□ -0.3
FYCO1-201ENST00000296137 CCAR1Q8IX12 1150 aaKnown RBP13.19□□□□□ -0.3
FYCO1-201ENST00000296137 SMARCE1Q969G3 411 aa13.19□□□□□ -0.3
FYCO1-201ENST00000296137 RBM28Q9NW13 759 aaKnown RBP13.19□□□□□ -0.3
FYCO1-201ENST00000296137 KCNH8Q96L42 1107 aa13.18□□□□□ -0.3
FYCO1-201ENST00000296137 KIF7Q2M1P5 1343 aa13.18□□□□□ -0.3
FYCO1-201ENST00000296137 BAZ1BQ9UIG0 1483 aaKnown RBP13.18□□□□□ -0.3
FYCO1-201ENST00000296137 RGL3Q3MIN7 710 aa13.18□□□□□ -0.3
FYCO1-201ENST00000296137 CCDC73Q6ZRK6 1079 aa13.18□□□□□ -0.3
FYCO1-201ENST00000296137 CFDP1Q9UEE9 299 aaPredicted RBP13.17□□□□□ -0.3
FYCO1-201ENST00000296137 FBXW7Q969H0 707 aa13.17□□□□□ -0.3
FYCO1-201ENST00000296137 TMX4Q9H1E5 349 aaPredicted RBP13.17□□□□□ -0.3
FYCO1-201ENST00000296137 SMC2O95347 1197 aa13.17□□□□□ -0.3
FYCO1-201ENST00000296137 GBP2P32456 591 aaPredicted RBP13.17□□□□□ -0.3
FYCO1-201ENST00000296137 CRBNQ96SW2 442 aa13.17□□□□□ -0.3
FYCO1-201ENST00000296137 SEPT7Q16181 437 aaKnown RBP13.17□□□□□ -0.3
FYCO1-201ENST00000296137 HSP90AB2PQ58FF8 381 aa13.17□□□□□ -0.3
FYCO1-201ENST00000296137 GTF2F1P35269 517 aaKnown RBP eCLIP13.16□□□□□ -0.3
FYCO1-201ENST00000296137 POGKQ9P215 609 aa13.16□□□□□ -0.3
FYCO1-201ENST00000296137 SWAP70Q9UH65 585 aa13.16□□□□□ -0.3
FYCO1-201ENST00000296137 ANKRD45Q5TZF3 282 aa13.16□□□□□ -0.3
FYCO1-201ENST00000296137 ERCC6Q03468 1493 aa13.16□□□□□ -0.3
FYCO1-201ENST00000296137 FAM193AP78312 1265 aa13.16□□□□□ -0.3
FYCO1-201ENST00000296137 EXOC6Q8TAG9 804 aa13.16□□□□□ -0.3
FYCO1-201ENST00000296137 WDR66Q8TBY9 1149 aa13.16□□□□□ -0.3
FYCO1-201ENST00000296137 IVLP07476 585 aa13.16□□□□□ -0.3
FYCO1-201ENST00000296137 BRD2P25440 801 aaKnown RBP13.15□□□□□ -0.3
FYCO1-201ENST00000296137 MAP9Q49MG5 647 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms