RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 H0YHG0 523 aa10.58□□□□□ -0.72
SCUBE3-201ENST00000274938 CPLX1O14810 134 aa10.57□□□□□ -0.72
SCUBE3-201ENST00000274938 PAK3O75914 559 aaPredicted RBP10.57□□□□□ -0.72
SCUBE3-201ENST00000274938 API5Q9BZZ5 524 aaKnown RBP10.57□□□□□ -0.72
SCUBE3-201ENST00000274938 ANO2Q9NQ90 1003 aa10.57□□□□□ -0.72
SCUBE3-201ENST00000274938 MYO6Q9UM54 1294 aa10.57□□□□□ -0.72
SCUBE3-201ENST00000274938 APPP05067 770 aa10.57□□□□□ -0.72
SCUBE3-201ENST00000274938 CCDC173Q0VFZ6 552 aa10.57□□□□□ -0.72
SCUBE3-201ENST00000274938 INTS3Q68E01 1043 aaKnown RBP10.57□□□□□ -0.72
SCUBE3-201ENST00000274938 SMC3Q9UQE7 1217 aa10.57□□□□□ -0.72
SCUBE3-201ENST00000274938 R3HCC1Q9Y3T6 440 aaKnown RBP10.56□□□□□ -0.72
SCUBE3-201ENST00000274938 FRAT2O75474 233 aaPredicted RBP10.56□□□□□ -0.72
SCUBE3-201ENST00000274938 AMOTL1Q8IY63 956 aa10.56□□□□□ -0.72
SCUBE3-201ENST00000274938 L3MBTL2Q969R5 705 aa10.56□□□□□ -0.72
SCUBE3-201ENST00000274938 G3V3G9 751 aa10.56□□□□□ -0.72
SCUBE3-201ENST00000274938 DCAF8Q5TAQ9 597 aa10.56□□□□□ -0.72
SCUBE3-201ENST00000274938 NASPP49321 788 aaPredicted RBP10.56□□□□□ -0.72
SCUBE3-201ENST00000274938 MBD3O95983 291 aa10.55□□□□□ -0.72
SCUBE3-201ENST00000274938 FOXD4L6Q3SYB3 417 aaPredicted RBP10.54□□□□□ -0.72
SCUBE3-201ENST00000274938 FOXD4L3Q6VB84 417 aaPredicted RBP10.54□□□□□ -0.72
SCUBE3-201ENST00000274938 NFKBIBQ15653 356 aa10.54□□□□□ -0.72
SCUBE3-201ENST00000274938 FOXD1Q16676 465 aa10.54□□□□□ -0.72
SCUBE3-201ENST00000274938 LEKR1Q6ZMV7 388 aa10.54□□□□□ -0.72
SCUBE3-201ENST00000274938 PKNOX2Q96KN3 472 aa10.54□□□□□ -0.72
SCUBE3-201ENST00000274938 AMPHP49418 695 aa10.54□□□□□ -0.72
SCUBE3-201ENST00000274938 OLFM4Q6UX06 510 aa10.54□□□□□ -0.72
SCUBE3-201ENST00000274938 PRKRIP1Q9H875 184 aaPredicted RBP10.54□□□□□ -0.72
SCUBE3-201ENST00000274938 HSP90AB4PQ58FF6 505 aa10.54□□□□□ -0.72
SCUBE3-201ENST00000274938 COG6Q9Y2V7 657 aa10.54□□□□□ -0.72
SCUBE3-201ENST00000274938 RSPH4AQ5TD94 716 aa10.53□□□□□ -0.72
SCUBE3-201ENST00000274938 GGT6Q6P531 493 aa10.53□□□□□ -0.72
SCUBE3-201ENST00000274938 TRDNQ13061 729 aa10.53□□□□□ -0.72
SCUBE3-201ENST00000274938 SAFBQ15424 915 aaKnown RBP eCLIP10.53□□□□□ -0.72
SCUBE3-201ENST00000274938 DZIP1LQ8IYY4 767 aaKnown RBP10.53□□□□□ -0.72
SCUBE3-201ENST00000274938 EIF4G1Q04637 1599 aaKnown RBP10.53□□□□□ -0.72
SCUBE3-201ENST00000274938 VPS37CA5D8V6 355 aaPredicted RBP10.53□□□□□ -0.72
SCUBE3-201ENST00000274938 IFIT2P09913 472 aaKnown RBP10.53□□□□□ -0.72
SCUBE3-201ENST00000274938 TCEAL9Q9UHQ7 104 aa10.53□□□□□ -0.72
SCUBE3-201ENST00000274938 NEXNQ0ZGT2 675 aa10.52□□□□□ -0.72
SCUBE3-201ENST00000274938 C22orf23Q9BZE7 217 aa10.52□□□□□ -0.72
SCUBE3-201ENST00000274938 EFCAB2Q5VUJ9 269 aa10.52□□□□□ -0.73
SCUBE3-201ENST00000274938 NOL10Q9BSC4 688 aaKnown RBP10.52□□□□□ -0.73
SCUBE3-201ENST00000274938 CARMIL2Q6F5E8 1435 aa10.52□□□□□ -0.73
SCUBE3-201ENST00000274938 NAP1L1P55209 391 aaKnown RBP10.52□□□□□ -0.73
SCUBE3-201ENST00000274938 KIF7Q2M1P5 1343 aa10.52□□□□□ -0.73
SCUBE3-201ENST00000274938 CAGE1Q8TC20 777 aa10.51□□□□□ -0.73
SCUBE3-201ENST00000274938 BCL11BQ9C0K0 894 aaPredicted RBP10.51□□□□□ -0.73
SCUBE3-201ENST00000274938 CUX2O14529 1486 aa10.51□□□□□ -0.73
SCUBE3-201ENST00000274938 MAPK8IP2Q13387 824 aaPredicted RBP10.51□□□□□ -0.73
SCUBE3-201ENST00000274938 KANK4Q5T7N3 995 aaPredicted RBP10.51□□□□□ -0.73
SCUBE3-201ENST00000274938 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.51□□□□□ -0.73
SCUBE3-201ENST00000274938 UACAQ9BZF9 1416 aa10.51□□□□□ -0.73
SCUBE3-201ENST00000274938 ERC2O15083 957 aa10.51□□□□□ -0.73
SCUBE3-201ENST00000274938 PLIN1O60240 522 aa10.51□□□□□ -0.73
SCUBE3-201ENST00000274938 CDC45O75419 566 aa10.5□□□□□ -0.73
SCUBE3-201ENST00000274938 CT47A1Q5JQC4 288 aaPredicted RBP10.5□□□□□ -0.73
SCUBE3-201ENST00000274938 CAVIN1Q6NZI2 390 aaKnown RBP10.5□□□□□ -0.73
SCUBE3-201ENST00000274938 GTF2E1P29083 439 aaPredicted RBP10.5□□□□□ -0.73
SCUBE3-201ENST00000274938 ZRSR2Q15696 482 aaKnown RBP10.5□□□□□ -0.73
SCUBE3-201ENST00000274938 ERICH2A1L162 156 aa10.5□□□□□ -0.73
SCUBE3-201ENST00000274938 USP8P40818 1118 aa10.5□□□□□ -0.73
SCUBE3-201ENST00000274938 PANK3Q9H999 370 aa10.5□□□□□ -0.73
SCUBE3-201ENST00000274938 SMARCE1Q969G3 411 aa10.5□□□□□ -0.73
SCUBE3-201ENST00000274938 RRP7AQ9Y3A4 280 aaKnown RBP10.5□□□□□ -0.73
SCUBE3-201ENST00000274938 PIP4K2AP48426 406 aaPredicted RBP10.49□□□□□ -0.73
SCUBE3-201ENST00000274938 NGDNQ8NEJ9 315 aaKnown RBP10.49□□□□□ -0.73
SCUBE3-201ENST00000274938 TSPY26PQ9H489 355 aa10.49□□□□□ -0.73
SCUBE3-201ENST00000274938 NACADO15069 1562 aa10.49□□□□□ -0.73
SCUBE3-201ENST00000274938 MCM2P49736 904 aa10.49□□□□□ -0.73
SCUBE3-201ENST00000274938 GOLGA6L7A0A1B0GV03 622 aa10.49□□□□□ -0.73
SCUBE3-201ENST00000274938 WWC1Q8IX03 1113 aa10.49□□□□□ -0.73
SCUBE3-201ENST00000274938 TSPYL1Q9H0U9 437 aa10.49□□□□□ -0.73
SCUBE3-201ENST00000274938 MLECQ14165 292 aa10.49□□□□□ -0.73
SCUBE3-201ENST00000274938 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.49□□□□□ -0.73
SCUBE3-201ENST00000274938 TRAK2O60296 914 aa10.48□□□□□ -0.73
SCUBE3-201ENST00000274938 ODF2Q5BJF6 829 aa10.48□□□□□ -0.73
SCUBE3-201ENST00000274938 PSMA5P28066 241 aa10.48□□□□□ -0.73
SCUBE3-201ENST00000274938 TAF3Q5VWG9 929 aa10.48□□□□□ -0.73
SCUBE3-201ENST00000274938 BCL2L13Q9BXK5 485 aa10.48□□□□□ -0.73
SCUBE3-201ENST00000274938 BRMS1Q9HCU9 246 aa10.48□□□□□ -0.73
SCUBE3-201ENST00000274938 SOGA1O94964 1423 aa10.48□□□□□ -0.73
SCUBE3-201ENST00000274938 OFD1O75665 1012 aa10.48□□□□□ -0.73
SCUBE3-201ENST00000274938 NFXL1Q6ZNB6 911 aa10.48□□□□□ -0.73
SCUBE3-201ENST00000274938 C1orf141Q5JVX7 400 aa10.48□□□□□ -0.73
SCUBE3-201ENST00000274938 C9orf78Q9NZ63 289 aaPredicted RBP10.48□□□□□ -0.73
SCUBE3-201ENST00000274938 G3BP1Q13283 466 aaKnown RBP eCLIP10.47□□□□□ -0.73
SCUBE3-201ENST00000274938 DDX58O95786 925 aaKnown RBP10.47□□□□□ -0.73
SCUBE3-201ENST00000274938 TRIM5Q9C035 493 aa10.47□□□□□ -0.73
SCUBE3-201ENST00000274938 KIAA0754O94854 1291 aa10.47□□□□□ -0.73
SCUBE3-201ENST00000274938 FILIP1LQ4L180 1135 aa10.47□□□□□ -0.73
SCUBE3-201ENST00000274938 PDILTQ8N807 584 aa10.47□□□□□ -0.73
SCUBE3-201ENST00000274938 COG3Q96JB2 828 aa10.47□□□□□ -0.73
SCUBE3-201ENST00000274938 ERLIN1O75477 346 aa10.46□□□□□ -0.73
SCUBE3-201ENST00000274938 HSP90AB2PQ58FF8 381 aa10.46□□□□□ -0.73
SCUBE3-201ENST00000274938 SDF4Q9BRK5 362 aa10.46□□□□□ -0.73
SCUBE3-201ENST00000274938 NINLQ9Y2I6 1382 aa10.46□□□□□ -0.73
SCUBE3-201ENST00000274938 XBP1P17861 261 aa10.46□□□□□ -0.73
SCUBE3-201ENST00000274938 TRIM34Q9BYJ4 488 aa10.46□□□□□ -0.73
SCUBE3-201ENST00000274938 CTDP1Q9Y5B0 961 aaPredicted RBP10.46□□□□□ -0.73
SCUBE3-201ENST00000274938 ERLIN2O94905 339 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms