RNA–Protein interactions for RNA: ENST00000271588.8

HMCN1-201, Transcript of hemicentin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCN1, Length 18,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-201ENST00000271588 HIP1O00291 1037 aa6□□□□□ -1.45
HMCN1-201ENST00000271588 SMC4Q9NTJ3 1288 aa6□□□□□ -1.45
HMCN1-201ENST00000271588 RRBP1Q9P2E9 1410 aaKnown RBP6□□□□□ -1.45
HMCN1-201ENST00000271588 IRX6P78412 446 aaPredicted RBP6□□□□□ -1.45
HMCN1-201ENST00000271588 HFM1A2PYH4 1435 aa6□□□□□ -1.45
HMCN1-201ENST00000271588 ARID3CA6NKF2 412 aa6□□□□□ -1.45
HMCN1-201ENST00000271588 ZRSR2Q15696 482 aaKnown RBP6□□□□□ -1.45
HMCN1-201ENST00000271588 DAPK1P53355 1430 aa6□□□□□ -1.45
HMCN1-201ENST00000271588 DDX49Q9Y6V7 483 aaKnown RBP6□□□□□ -1.45
HMCN1-201ENST00000271588 PLEKHH1Q9ULM0 1364 aa6□□□□□ -1.45
HMCN1-201ENST00000271588 SLKQ9H2G2 1235 aaPredicted RBP6□□□□□ -1.45
HMCN1-201ENST00000271588 SMARCA4P51532 1647 aa6□□□□□ -1.45
HMCN1-201ENST00000271588 MFAP1P55081 439 aaKnown RBP6□□□□□ -1.45
HMCN1-201ENST00000271588 EIF3JO75822 258 aaKnown RBP6□□□□□ -1.45
HMCN1-201ENST00000271588 NUP155O75694 1391 aa6□□□□□ -1.45
HMCN1-201ENST00000271588 MCM3P25205 808 aa6□□□□□ -1.45
HMCN1-201ENST00000271588 ERCC6Q03468 1493 aa5.99□□□□□ -1.45
HMCN1-201ENST00000271588 ZNF526Q8TF50 670 aaPredicted RBP5.99□□□□□ -1.45
HMCN1-201ENST00000271588 INCENPQ9NQS7 918 aa5.99□□□□□ -1.45
HMCN1-201ENST00000271588 PDE3AQ14432 1141 aa5.99□□□□□ -1.45
HMCN1-201ENST00000271588 RABEP1Q15276 862 aa5.99□□□□□ -1.45
HMCN1-201ENST00000271588 CREBRFQ8IUR6 639 aa5.99□□□□□ -1.45
HMCN1-201ENST00000271588 PRKRIP1Q9H875 184 aaPredicted RBP5.99□□□□□ -1.45
HMCN1-201ENST00000271588 ATAD2Q6PL18 1390 aa5.99□□□□□ -1.45
HMCN1-201ENST00000271588 PES1O00541 588 aaKnown RBP5.99□□□□□ -1.45
HMCN1-201ENST00000271588 ERLIN1O75477 346 aa5.99□□□□□ -1.45
HMCN1-201ENST00000271588 INTS3Q68E01 1043 aaKnown RBP5.99□□□□□ -1.45
HMCN1-201ENST00000271588 KLHL34Q8N239 644 aa5.99□□□□□ -1.45
HMCN1-201ENST00000271588 MROH2BQ7Z745 1585 aa5.98□□□□□ -1.45
HMCN1-201ENST00000271588 GBP3Q9H0R5 595 aa5.98□□□□□ -1.45
HMCN1-201ENST00000271588 SOGA1O94964 1423 aa5.98□□□□□ -1.45
HMCN1-201ENST00000271588 RUFY1Q96T51 708 aa5.98□□□□□ -1.45
HMCN1-201ENST00000271588 U2SURPO15042 1029 aaKnown RBP5.98□□□□□ -1.45
HMCN1-201ENST00000271588 ARID3AQ99856 593 aa5.98□□□□□ -1.45
HMCN1-201ENST00000271588 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.98□□□□□ -1.45
HMCN1-201ENST00000271588 HMGB1P1B2RPK0 211 aaPredicted RBP5.98□□□□□ -1.45
HMCN1-201ENST00000271588 NEXNQ0ZGT2 675 aa5.98□□□□□ -1.45
HMCN1-201ENST00000271588 EIF4G1Q04637 1599 aaKnown RBP5.98□□□□□ -1.45
HMCN1-201ENST00000271588 PKD2Q13563 968 aa5.98□□□□□ -1.45
HMCN1-201ENST00000271588 RRP12Q5JTH9 1297 aaKnown RBP5.97□□□□□ -1.45
HMCN1-201ENST00000271588 NEMFO60524 1076 aa5.97□□□□□ -1.45
HMCN1-201ENST00000271588 ITPRIPQ8IWB1 547 aa5.97□□□□□ -1.45
HMCN1-201ENST00000271588 JMYQ8N9B5 988 aa5.97□□□□□ -1.45
HMCN1-201ENST00000271588 ZNF771Q7L3S4 317 aaPredicted RBP5.97□□□□□ -1.45
HMCN1-201ENST00000271588 CADPSQ9ULU8 1353 aa5.97□□□□□ -1.45
HMCN1-201ENST00000271588 ERC2O15083 957 aa5.97□□□□□ -1.45
HMCN1-201ENST00000271588 LEKR1Q6ZMV7 388 aa5.97□□□□□ -1.45
HMCN1-201ENST00000271588 NOL10Q9BSC4 688 aaKnown RBP5.97□□□□□ -1.45
HMCN1-201ENST00000271588 RGL3Q3MIN7 710 aa5.96□□□□□ -1.45
HMCN1-201ENST00000271588 SF3A1Q15459 793 aaKnown RBP5.96□□□□□ -1.45
HMCN1-201ENST00000271588 PSMA5P28066 241 aa5.96□□□□□ -1.46
HMCN1-201ENST00000271588 DHX37Q8IY37 1157 aaKnown RBP5.96□□□□□ -1.46
HMCN1-201ENST00000271588 DHX16O60231 1041 aaKnown RBP5.96□□□□□ -1.46
HMCN1-201ENST00000271588 ANKRD1Q15327 319 aa5.96□□□□□ -1.46
HMCN1-201ENST00000271588 USP47Q96K76 1375 aa5.96□□□□□ -1.46
HMCN1-201ENST00000271588 DACH1Q9UI36 760 aa5.96□□□□□ -1.46
HMCN1-201ENST00000271588 FAM13BQ9NYF5 915 aa5.96□□□□□ -1.46
HMCN1-201ENST00000271588 SIN3AQ96ST3 1273 aa5.96□□□□□ -1.46
HMCN1-201ENST00000271588 CTR9Q6PD62 1173 aa5.96□□□□□ -1.46
HMCN1-201ENST00000271588 MNS1Q8NEH6 495 aa5.95□□□□□ -1.46
HMCN1-201ENST00000271588 DDX11Q96FC9 970 aa5.95□□□□□ -1.46
HMCN1-201ENST00000271588 TUBBP07437 444 aa5.95□□□□□ -1.46
HMCN1-201ENST00000271588 CCDC73Q6ZRK6 1079 aa5.95□□□□□ -1.46
HMCN1-201ENST00000271588 EHBP1L1Q8N3D4 1523 aa5.95□□□□□ -1.46
HMCN1-201ENST00000271588 AEBP1Q8IUX7 1158 aa5.95□□□□□ -1.46
HMCN1-201ENST00000271588 SMG6Q86US8 1419 aaKnown RBP5.95□□□□□ -1.46
HMCN1-201ENST00000271588 POTEB2H3BUK9 544 aa5.95□□□□□ -1.46
HMCN1-201ENST00000271588 CECR2Q9BXF3 1484 aa5.95□□□□□ -1.46
HMCN1-201ENST00000271588 NASPP49321 788 aaPredicted RBP5.95□□□□□ -1.46
HMCN1-201ENST00000271588 SRPK2P78362 688 aaKnown RBP5.95□□□□□ -1.46
HMCN1-201ENST00000271588 CC2D1BQ5T0F9 858 aaKnown RBP5.95□□□□□ -1.46
HMCN1-201ENST00000271588 GCC1Q96CN9 775 aa5.95□□□□□ -1.46
HMCN1-201ENST00000271588 EVC2Q86UK5 1308 aa5.95□□□□□ -1.46
HMCN1-201ENST00000271588 H3BQV1 296 aa5.95□□□□□ -1.46
HMCN1-201ENST00000271588 IFFO2Q5TF58 517 aa5.95□□□□□ -1.46
HMCN1-201ENST00000271588 SMARCE1Q969G3 411 aa5.95□□□□□ -1.46
HMCN1-201ENST00000271588 U2AF1L5P0DN76 240 aaPredicted RBP5.94□□□□□ -1.46
HMCN1-201ENST00000271588 U2AF1Q01081 240 aaKnown RBP eCLIP5.94□□□□□ -1.46
HMCN1-201ENST00000271588 SYNE3Q6ZMZ3 975 aa5.94□□□□□ -1.46
HMCN1-201ENST00000271588 CASKIN1Q8WXD9 1431 aa5.94□□□□□ -1.46
HMCN1-201ENST00000271588 BBXQ8WY36 941 aaPredicted RBP5.94□□□□□ -1.46
HMCN1-201ENST00000271588 HS1BP3Q53T59 392 aa5.94□□□□□ -1.46
HMCN1-201ENST00000271588 SASS6Q6UVJ0 657 aa5.94□□□□□ -1.46
HMCN1-201ENST00000271588 CBFA2T2O43439 604 aa5.94□□□□□ -1.46
HMCN1-201ENST00000271588 NCBP3Q53F19 620 aaKnown RBP5.94□□□□□ -1.46
HMCN1-201ENST00000271588 GOLGA6L9A6NEM1 432 aa5.94□□□□□ -1.46
HMCN1-201ENST00000271588 SRCIN1Q9C0H9 1055 aa5.94□□□□□ -1.46
HMCN1-201ENST00000271588 CALCOCO1Q9P1Z2 691 aa5.94□□□□□ -1.46
HMCN1-201ENST00000271588 ANKRD18AQ8IVF6 992 aa5.94□□□□□ -1.46
HMCN1-201ENST00000271588 ERLIN2O94905 339 aa5.94□□□□□ -1.46
HMCN1-201ENST00000271588 XBP1P17861 261 aa5.94□□□□□ -1.46
HMCN1-201ENST00000271588 GNAI1P63096 354 aa5.94□□□□□ -1.46
HMCN1-201ENST00000271588 FAM193AP78312 1265 aa5.93□□□□□ -1.46
HMCN1-201ENST00000271588 TRIM29Q14134 588 aa5.93□□□□□ -1.46
HMCN1-201ENST00000271588 FGD6Q6ZV73 1430 aa5.93□□□□□ -1.46
HMCN1-201ENST00000271588 CDC45O75419 566 aa5.93□□□□□ -1.46
HMCN1-201ENST00000271588 AKAP17AQ02040 695 aaKnown RBP5.93□□□□□ -1.46
HMCN1-201ENST00000271588 ANKRD30BQ9BXX2 1392 aa5.93□□□□□ -1.46
HMCN1-201ENST00000271588 A6NNZ2 444 aa5.93□□□□□ -1.46
HMCN1-201ENST00000271588 SAFBQ15424 915 aaKnown RBP eCLIP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms