RNA–Protein interactions for RNA: ENST00000264158.12

RAB3GAP1-201, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3GAP1, Length 4,914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-201ENST00000264158 HDAC5Q9UQL6 1122 aa11.76□□□□□ -0.53
RAB3GAP1-201ENST00000264158 MS4A1P11836 297 aa11.75□□□□□ -0.53
RAB3GAP1-201ENST00000264158 C8orf37Q96NL8 207 aa11.75□□□□□ -0.53
RAB3GAP1-201ENST00000264158 SNAPC4Q5SXM2 1469 aa11.75□□□□□ -0.53
RAB3GAP1-201ENST00000264158 WDHD1O75717 1129 aaPredicted RBP11.75□□□□□ -0.53
RAB3GAP1-201ENST00000264158 KIF7Q2M1P5 1343 aa11.74□□□□□ -0.53
RAB3GAP1-201ENST00000264158 VPS37DQ86XT2 251 aa11.74□□□□□ -0.53
RAB3GAP1-201ENST00000264158 ERICH3Q5RHP9 1530 aa11.74□□□□□ -0.53
RAB3GAP1-201ENST00000264158 RAD21O60216 631 aa11.74□□□□□ -0.53
RAB3GAP1-201ENST00000264158 HSCBQ8IWL3 235 aa11.74□□□□□ -0.53
RAB3GAP1-201ENST00000264158 POLA1P09884 1462 aaPredicted RBP11.74□□□□□ -0.53
RAB3GAP1-201ENST00000264158 L1TD1Q5T7N2 865 aaKnown RBP11.74□□□□□ -0.53
RAB3GAP1-201ENST00000264158 CCDC146Q8IYE0 955 aa11.74□□□□□ -0.53
RAB3GAP1-201ENST00000264158 CNTLNQ9NXG0 1405 aa11.73□□□□□ -0.53
RAB3GAP1-201ENST00000264158 SLC4A3P48751 1232 aa11.73□□□□□ -0.53
RAB3GAP1-201ENST00000264158 CASC1Q6TDU7 716 aa11.73□□□□□ -0.53
RAB3GAP1-201ENST00000264158 TOP2BQ02880 1626 aa11.73□□□□□ -0.53
RAB3GAP1-201ENST00000264158 FAM177BA6PVY3 158 aa11.72□□□□□ -0.53
RAB3GAP1-201ENST00000264158 MYOM3Q5VTT5 1437 aa11.72□□□□□ -0.53
RAB3GAP1-201ENST00000264158 PANK3Q9H999 370 aa11.71□□□□□ -0.53
RAB3GAP1-201ENST00000264158 PRXQ9BXM0 1461 aa11.71□□□□□ -0.53
RAB3GAP1-201ENST00000264158 CRBNQ96SW2 442 aa11.71□□□□□ -0.53
RAB3GAP1-201ENST00000264158 DNMBPQ6XZF7 1577 aa11.71□□□□□ -0.54
RAB3GAP1-201ENST00000264158 TPRNQ4KMQ1 711 aa11.71□□□□□ -0.54
RAB3GAP1-201ENST00000264158 CADPS2Q86UW7 1296 aa11.71□□□□□ -0.54
RAB3GAP1-201ENST00000264158 GZF1Q9H116 711 aaPredicted RBP11.71□□□□□ -0.54
RAB3GAP1-201ENST00000264158 PTMAP06454 111 aaKnown RBP11.7□□□□□ -0.54
RAB3GAP1-201ENST00000264158 WDR97A6NE52 1622 aa11.7□□□□□ -0.54
RAB3GAP1-201ENST00000264158 CCDC144AA2RUR9 1427 aa11.7□□□□□ -0.54
RAB3GAP1-201ENST00000264158 SLC52A1Q9NWF4 448 aa11.69□□□□□ -0.54
RAB3GAP1-201ENST00000264158 ZC3H6P61129 1189 aaKnown RBP11.69□□□□□ -0.54
RAB3GAP1-201ENST00000264158 SAMD1Q6SPF0 538 aaPredicted RBP11.69□□□□□ -0.54
RAB3GAP1-201ENST00000264158 ARHGAP5Q13017 1502 aa11.69□□□□□ -0.54
RAB3GAP1-201ENST00000264158 TATP17735 454 aaPredicted RBP11.69□□□□□ -0.54
RAB3GAP1-201ENST00000264158 GRM1Q13255 1194 aa11.69□□□□□ -0.54
RAB3GAP1-201ENST00000264158 RWDD1Q9H446 243 aaPredicted RBP11.68□□□□□ -0.54
RAB3GAP1-201ENST00000264158 POLD1P28340 1107 aa11.68□□□□□ -0.54
RAB3GAP1-201ENST00000264158 LMOD3Q0VAK6 560 aa11.68□□□□□ -0.54
RAB3GAP1-201ENST00000264158 NEXNQ0ZGT2 675 aa11.68□□□□□ -0.54
RAB3GAP1-201ENST00000264158 VPS53Q5VIR6 699 aa11.68□□□□□ -0.54
RAB3GAP1-201ENST00000264158 CLUAP1Q96AJ1 413 aa11.68□□□□□ -0.54
RAB3GAP1-201ENST00000264158 ZNF644Q9H582 1327 aaPredicted RBP11.68□□□□□ -0.54
RAB3GAP1-201ENST00000264158 AKNAQ7Z591 1439 aa11.67□□□□□ -0.54
RAB3GAP1-201ENST00000264158 CENPQQ7L2Z9 268 aaPredicted RBP11.67□□□□□ -0.54
RAB3GAP1-201ENST00000264158 TOMM22Q9NS69 142 aa11.67□□□□□ -0.54
RAB3GAP1-201ENST00000264158 CASKIN1Q8WXD9 1431 aa11.67□□□□□ -0.54
RAB3GAP1-201ENST00000264158 EIF2S2P20042 333 aaKnown RBP11.67□□□□□ -0.54
RAB3GAP1-201ENST00000264158 MSH6P52701 1360 aa11.66□□□□□ -0.54
RAB3GAP1-201ENST00000264158 DISP3Q9P2K9 1392 aa11.66□□□□□ -0.54
RAB3GAP1-201ENST00000264158 FAM161AQ3B820 660 aa11.66□□□□□ -0.54
RAB3GAP1-201ENST00000264158 DNTTIP2Q5QJE6 756 aaKnown RBP11.66□□□□□ -0.54
RAB3GAP1-201ENST00000264158 CNKSR2Q8WXI2 1034 aa11.66□□□□□ -0.54
RAB3GAP1-201ENST00000264158 CCDC184Q52MB2 194 aa11.66□□□□□ -0.54
RAB3GAP1-201ENST00000264158 AMOTL1Q8IY63 956 aa11.66□□□□□ -0.54
RAB3GAP1-201ENST00000264158 NCOA2Q15596 1464 aa11.66□□□□□ -0.54
RAB3GAP1-201ENST00000264158 CENPJQ9HC77 1338 aaPredicted RBP11.66□□□□□ -0.54
RAB3GAP1-201ENST00000264158 SLC4A10Q6U841 1118 aa11.65□□□□□ -0.54
RAB3GAP1-201ENST00000264158 ZRSR1Q15695 479 aaKnown RBP11.65□□□□□ -0.54
RAB3GAP1-201ENST00000264158 TMEM132EQ6IEE7 984 aa11.65□□□□□ -0.54
RAB3GAP1-201ENST00000264158 ITPRIPQ8IWB1 547 aa11.65□□□□□ -0.54
RAB3GAP1-201ENST00000264158 APBB1O00213 710 aa11.65□□□□□ -0.54
RAB3GAP1-201ENST00000264158 MFAP1P55081 439 aaKnown RBP11.65□□□□□ -0.54
RAB3GAP1-201ENST00000264158 GSE1Q14687 1217 aa11.64□□□□□ -0.55
RAB3GAP1-201ENST00000264158 FOXO3O43524 673 aa11.63□□□□□ -0.55
RAB3GAP1-201ENST00000264158 HSP90B1P14625 803 aaKnown RBP11.62□□□□□ -0.55
RAB3GAP1-201ENST00000264158 IPO8O15397 1037 aaKnown RBP11.62□□□□□ -0.55
RAB3GAP1-201ENST00000264158 CLEC11AQ9Y240 323 aa11.62□□□□□ -0.55
RAB3GAP1-201ENST00000264158 TIAM1Q13009 1591 aa11.62□□□□□ -0.55
RAB3GAP1-201ENST00000264158 TTLL12Q14166 644 aaPredicted RBP11.62□□□□□ -0.55
RAB3GAP1-201ENST00000264158 RRP7AQ9Y3A4 280 aaKnown RBP11.62□□□□□ -0.55
RAB3GAP1-201ENST00000264158 URB2Q14146 1524 aaKnown RBP11.62□□□□□ -0.55
RAB3GAP1-201ENST00000264158 BEGAINQ9BUH8 593 aa11.62□□□□□ -0.55
RAB3GAP1-201ENST00000264158 TCEAL9Q9UHQ7 104 aa11.62□□□□□ -0.55
RAB3GAP1-201ENST00000264158 FYCO1Q9BQS8 1478 aa11.61□□□□□ -0.55
RAB3GAP1-201ENST00000264158 SMC4Q9NTJ3 1288 aa11.61□□□□□ -0.55
RAB3GAP1-201ENST00000264158 GOLGA6L3A6NEY3 463 aa11.61□□□□□ -0.55
RAB3GAP1-201ENST00000264158 PLCB2Q00722 1185 aa11.61□□□□□ -0.55
RAB3GAP1-201ENST00000264158 BICDL1Q6ZP65 573 aa11.6□□□□□ -0.55
RAB3GAP1-201ENST00000264158 GBP4Q96PP9 640 aa11.6□□□□□ -0.55
RAB3GAP1-201ENST00000264158 BCL2L13Q9BXK5 485 aa11.6□□□□□ -0.55
RAB3GAP1-201ENST00000264158 TEX14Q8IWB6 1497 aa11.6□□□□□ -0.55
RAB3GAP1-201ENST00000264158 EXOC5O00471 708 aa11.6□□□□□ -0.55
RAB3GAP1-201ENST00000264158 APAF1O14727 1248 aa11.6□□□□□ -0.55
RAB3GAP1-201ENST00000264158 COG6Q9Y2V7 657 aa11.59□□□□□ -0.55
RAB3GAP1-201ENST00000264158 MSNP26038 577 aaKnown RBP11.59□□□□□ -0.55
RAB3GAP1-201ENST00000264158 BAG6P46379 1132 aa11.59□□□□□ -0.55
RAB3GAP1-201ENST00000264158 PLEKHO1Q53GL0 409 aaPredicted RBP11.59□□□□□ -0.55
RAB3GAP1-201ENST00000264158 CGNL1Q0VF96 1302 aa11.59□□□□□ -0.55
RAB3GAP1-201ENST00000264158 PRDM2Q13029 1718 aa11.59□□□□□ -0.55
RAB3GAP1-201ENST00000264158 DDX58O95786 925 aaKnown RBP11.59□□□□□ -0.55
RAB3GAP1-201ENST00000264158 CABP4P57796 275 aa11.59□□□□□ -0.55
RAB3GAP1-201ENST00000264158 LRPPRCP42704 1394 aaKnown RBP11.59□□□□□ -0.55
RAB3GAP1-201ENST00000264158 ABCA10Q8WWZ4 1543 aa11.59□□□□□ -0.55
RAB3GAP1-201ENST00000264158 CDCA7LQ96GN5 454 aa11.59□□□□□ -0.55
RAB3GAP1-201ENST00000264158 HFM1A2PYH4 1435 aa11.58□□□□□ -0.56
RAB3GAP1-201ENST00000264158 MARCH6O60337 910 aa11.58□□□□□ -0.56
RAB3GAP1-201ENST00000264158 ZNF219Q9P2Y4 722 aaPredicted RBP11.58□□□□□ -0.56
RAB3GAP1-201ENST00000264158 ZPR1O75312 459 aa11.58□□□□□ -0.56
RAB3GAP1-201ENST00000264158 GNL2Q13823 731 aaKnown RBP11.58□□□□□ -0.56
RAB3GAP1-201ENST00000264158 KIF6Q6ZMV9 814 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms