RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 SETD1BQ9UPS6 1966 aaKnown RBP17.2■□□□□ 0.34
PFDN1-201ENST00000261813 CFAP65Q6ZU64 1925 aaKnown RBP17.19■□□□□ 0.34
PFDN1-201ENST00000261813 SYNMO15061 1565 aa17.19■□□□□ 0.34
PFDN1-201ENST00000261813 CEP170BQ9Y4F5 1589 aaPredicted RBP17.17■□□□□ 0.34
PFDN1-201ENST00000261813 HRCP23327 699 aa17.17■□□□□ 0.34
PFDN1-201ENST00000261813 ZNF142P52746 1687 aaPredicted RBP17.17■□□□□ 0.34
PFDN1-201ENST00000261813 NLRP1Q9C000 1473 aa17.17■□□□□ 0.34
PFDN1-201ENST00000261813 A2ML1A8K2U0 1454 aa17.16■□□□□ 0.34
PFDN1-201ENST00000261813 ACIN1Q9UKV3 1341 aaKnown RBP17.16■□□□□ 0.34
PFDN1-201ENST00000261813 PKD2Q13563 968 aa17.15■□□□□ 0.34
PFDN1-201ENST00000261813 REM2Q8IYK8 340 aaPredicted RBP17.15■□□□□ 0.34
PFDN1-201ENST00000261813 MPHOSPH9Q99550 1183 aa17.15■□□□□ 0.34
PFDN1-201ENST00000261813 DISP3Q9P2K9 1392 aa17.14■□□□□ 0.33
PFDN1-201ENST00000261813 PTPRTO14522 1441 aa17.13■□□□□ 0.33
PFDN1-201ENST00000261813 UGGT1Q9NYU2 1555 aa17.12■□□□□ 0.33
PFDN1-201ENST00000261813 SPHKAPQ2M3C7 1700 aa17.12■□□□□ 0.33
PFDN1-201ENST00000261813 PIK3C2BO00750 1634 aa17.11■□□□□ 0.33
PFDN1-201ENST00000261813 IDI1Q13907 227 aa17.11■□□□□ 0.33
PFDN1-201ENST00000261813 PLA2R1Q13018 1463 aa17.1■□□□□ 0.33
PFDN1-201ENST00000261813 SLC52A1Q9NWF4 448 aa17.1■□□□□ 0.33
PFDN1-201ENST00000261813 TRPM2O94759 1503 aa17.09■□□□□ 0.33
PFDN1-201ENST00000261813 STRCQ7RTU9 1775 aa17.09■□□□□ 0.33
PFDN1-201ENST00000261813 UBR1Q8IWV7 1749 aa17.09■□□□□ 0.33
PFDN1-201ENST00000261813 SPDYE4A6NLX3 237 aa17.07■□□□□ 0.32
PFDN1-201ENST00000261813 ADGRB3O60242 1522 aa17.06■□□□□ 0.32
PFDN1-201ENST00000261813 POTEHQ6S545 545 aa17.06■□□□□ 0.32
PFDN1-201ENST00000261813 CLTCL1P53675 1640 aa17.05■□□□□ 0.32
PFDN1-201ENST00000261813 KDM5AP29375 1690 aaKnown RBP17.05■□□□□ 0.32
PFDN1-201ENST00000261813 THEMISQ8N1K5 641 aaPredicted RBP17.04■□□□□ 0.32
PFDN1-201ENST00000261813 TMEM131LA2VDJ0 1609 aa17.03■□□□□ 0.32
PFDN1-201ENST00000261813 SOCS7O14512 581 aa17.02■□□□□ 0.32
PFDN1-201ENST00000261813 STAG3Q9UJ98 1225 aa17.02■□□□□ 0.32
PFDN1-201ENST00000261813 ARHGAP23Q9P227 1491 aa17.02■□□□□ 0.31
PFDN1-201ENST00000261813 ILDR2Q71H61 639 aa17.02■□□□□ 0.31
PFDN1-201ENST00000261813 SLIT1O75093 1534 aa17.01■□□□□ 0.31
PFDN1-201ENST00000261813 IQSEC2Q5JU85 1478 aa17.01■□□□□ 0.31
PFDN1-201ENST00000261813 TMEM2Q9UHN6 1383 aa17■□□□□ 0.31
PFDN1-201ENST00000261813 MYO5BQ9ULV0 1848 aa17■□□□□ 0.31
PFDN1-201ENST00000261813 NCKAP5LQ9HCH0 1330 aa17■□□□□ 0.31
PFDN1-201ENST00000261813 CHGAP10645 457 aaKnown RBP17■□□□□ 0.31
PFDN1-201ENST00000261813 ANKRD30BQ9BXX2 1392 aa16.99■□□□□ 0.31
PFDN1-201ENST00000261813 CCDC144AA2RUR9 1427 aa16.98■□□□□ 0.31
PFDN1-201ENST00000261813 NEURL4Q96JN8 1562 aa16.98■□□□□ 0.31
PFDN1-201ENST00000261813 POLR1AO95602 1720 aaPredicted RBP16.98■□□□□ 0.31
PFDN1-201ENST00000261813 LTBP4Q8N2S1 1624 aa16.97■□□□□ 0.31
PFDN1-201ENST00000261813 DHX57Q6P158 1386 aaKnown RBP16.97■□□□□ 0.31
PFDN1-201ENST00000261813 LTKP29376 864 aa16.96■□□□□ 0.31
PFDN1-201ENST00000261813 ANKLE2Q86XL3 938 aa16.96■□□□□ 0.31
PFDN1-201ENST00000261813 ZFYVE9O95405 1425 aa16.96■□□□□ 0.31
PFDN1-201ENST00000261813 KIF1BO60333 1816 aa16.95■□□□□ 0.3
PFDN1-201ENST00000261813 SCAF11Q99590 1463 aaKnown RBP16.95■□□□□ 0.3
PFDN1-201ENST00000261813 PITPNM1O00562 1244 aa16.95■□□□□ 0.3
PFDN1-201ENST00000261813 CHRDL2Q6WN34 429 aa16.95■□□□□ 0.3
PFDN1-201ENST00000261813 RIMS2Q9UQ26 1411 aa16.94■□□□□ 0.3
PFDN1-201ENST00000261813 TXNDC2Q86VQ3 553 aa16.94■□□□□ 0.3
PFDN1-201ENST00000261813 MED14O60244 1454 aa16.94■□□□□ 0.3
PFDN1-201ENST00000261813 SPATA31E1Q6ZUB1 1445 aa16.93■□□□□ 0.3
PFDN1-201ENST00000261813 EID1Q9Y6B2 187 aa16.92■□□□□ 0.3
PFDN1-201ENST00000261813 NPHP4O75161 1426 aaPredicted RBP16.92■□□□□ 0.3
PFDN1-201ENST00000261813 UBAP1LF5GYI3 381 aa16.91■□□□□ 0.3
PFDN1-201ENST00000261813 NEXMIFQ5QGS0 1516 aa16.91■□□□□ 0.3
PFDN1-201ENST00000261813 ZNF326Q5BKZ1 582 aaKnown RBP16.9■□□□□ 0.3
PFDN1-201ENST00000261813 SPDYE1Q8NFV5 336 aaPredicted RBP16.9■□□□□ 0.3
PFDN1-201ENST00000261813 ZNF335Q9H4Z2 1342 aaPredicted RBP16.9■□□□□ 0.3
PFDN1-201ENST00000261813 NUTM2DQ5VT03 806 aaPredicted RBP16.89■□□□□ 0.3
PFDN1-201ENST00000261813 PROM2Q8N271 834 aa16.89■□□□□ 0.3
PFDN1-201ENST00000261813 IQGAP1P46940 1657 aa16.89■□□□□ 0.29
PFDN1-201ENST00000261813 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.88■□□□□ 0.29
PFDN1-201ENST00000261813 HDGFP51858 240 aaKnown RBP16.87■□□□□ 0.29
PFDN1-201ENST00000261813 RGL3Q3MIN7 710 aa16.87■□□□□ 0.29
PFDN1-201ENST00000261813 PLEKHG1Q9ULL1 1385 aa16.86■□□□□ 0.29
PFDN1-201ENST00000261813 PPP1R15AO75807 674 aaPredicted RBP16.86■□□□□ 0.29
PFDN1-201ENST00000261813 RPGRIP1LQ68CZ1 1315 aa16.86■□□□□ 0.29
PFDN1-201ENST00000261813 PPLO60437 1756 aa16.85■□□□□ 0.29
PFDN1-201ENST00000261813 IFT172Q9UG01 1749 aa16.84■□□□□ 0.29
PFDN1-201ENST00000261813 SIN3AQ96ST3 1273 aa16.83■□□□□ 0.28
PFDN1-201ENST00000261813 ADAMTS13Q76LX8 1427 aa16.82■□□□□ 0.28
PFDN1-201ENST00000261813 NRXN3Q9Y4C0 1643 aa16.81■□□□□ 0.28
PFDN1-201ENST00000261813 SLC26A8Q96RN1 970 aa16.81■□□□□ 0.28
PFDN1-201ENST00000261813 SETBP1Q9Y6X0 1596 aa16.81■□□□□ 0.28
PFDN1-201ENST00000261813 FKBP8Q14318 412 aa16.8■□□□□ 0.28
PFDN1-201ENST00000261813 VGFO15240 615 aaPredicted RBP16.79■□□□□ 0.28
PFDN1-201ENST00000261813 CCER1Q8TC90 406 aaPredicted RBP16.79■□□□□ 0.28
PFDN1-201ENST00000261813 BCANQ96GW7 911 aa16.79■□□□□ 0.28
PFDN1-201ENST00000261813 ADGRF5Q8IZF2 1346 aa16.79■□□□□ 0.28
PFDN1-201ENST00000261813 MYOM2P54296 1465 aa16.78■□□□□ 0.28
PFDN1-201ENST00000261813 TOM1O60784 492 aa16.77■□□□□ 0.28
PFDN1-201ENST00000261813 DIP2AQ14689 1571 aa16.77■□□□□ 0.28
PFDN1-201ENST00000261813 CLSPNQ9HAW4 1339 aa16.77■□□□□ 0.27
PFDN1-201ENST00000261813 NEUROD1Q13562 356 aa16.77■□□□□ 0.27
PFDN1-201ENST00000261813 TBX22Q9Y458 520 aa16.77■□□□□ 0.27
PFDN1-201ENST00000261813 NRXN1Q9ULB1 1477 aa16.76■□□□□ 0.27
PFDN1-201ENST00000261813 PIP4K2BP78356 416 aa16.75■□□□□ 0.27
PFDN1-201ENST00000261813 CLEC11AQ9Y240 323 aa16.75■□□□□ 0.27
PFDN1-201ENST00000261813 PIK3C2GO75747 1445 aa16.74■□□□□ 0.27
PFDN1-201ENST00000261813 STRCP1A6NGW2 1772 aa16.74■□□□□ 0.27
PFDN1-201ENST00000261813 FXR2P51116 673 aaKnown RBP eCLIP16.74■□□□□ 0.27
PFDN1-201ENST00000261813 DCAF11Q8TEB1 546 aa16.74■□□□□ 0.27
PFDN1-201ENST00000261813 SETD1AO15047 1707 aaKnown RBP16.74■□□□□ 0.27
PFDN1-201ENST00000261813 ALKQ9UM73 1620 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms