RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 IQGAP3Q86VI3 1631 aa15.94■□□□□ 0.14
CCNA1-201ENST00000255465 PAK3O75914 559 aaPredicted RBP15.93■□□□□ 0.14
CCNA1-201ENST00000255465 ZBTB47Q9UFB7 747 aaPredicted RBP15.93■□□□□ 0.14
CCNA1-201ENST00000255465 TET3O43151 1660 aa15.93■□□□□ 0.14
CCNA1-201ENST00000255465 ARHGAP31Q2M1Z3 1444 aa15.93■□□□□ 0.14
CCNA1-201ENST00000255465 UHRF1BP1Q6BDS2 1440 aa15.93■□□□□ 0.14
CCNA1-201ENST00000255465 MYO3AQ8NEV4 1616 aa15.93■□□□□ 0.14
CCNA1-201ENST00000255465 EFCAB6Q5THR3 1501 aa15.92■□□□□ 0.14
CCNA1-201ENST00000255465 SPATA31D1Q6ZQQ2 1576 aa15.91■□□□□ 0.14
CCNA1-201ENST00000255465 NUP155O75694 1391 aa15.91■□□□□ 0.14
CCNA1-201ENST00000255465 PPM1GO15355 546 aaPredicted RBP15.91■□□□□ 0.14
CCNA1-201ENST00000255465 TNRQ92752 1358 aa15.9■□□□□ 0.14
CCNA1-201ENST00000255465 ZNF142P52746 1687 aaPredicted RBP15.9■□□□□ 0.14
CCNA1-201ENST00000255465 ERVK-7P63135 1459 aa15.9■□□□□ 0.14
CCNA1-201ENST00000255465 E9PCH4 1651 aa15.89■□□□□ 0.13
CCNA1-201ENST00000255465 HSPA2P54652 639 aa15.88■□□□□ 0.13
CCNA1-201ENST00000255465 CEP170BQ9Y4F5 1589 aaPredicted RBP15.88■□□□□ 0.13
CCNA1-201ENST00000255465 SETD5Q9C0A6 1442 aa15.86■□□□□ 0.13
CCNA1-201ENST00000255465 RPRD2Q5VT52 1461 aaKnown RBP15.86■□□□□ 0.13
CCNA1-201ENST00000255465 RBM10P98175 930 aaKnown RBP15.86■□□□□ 0.13
CCNA1-201ENST00000255465 A2ML1A8K2U0 1454 aa15.85■□□□□ 0.13
CCNA1-201ENST00000255465 TRIM52Q96A61 297 aa15.84■□□□□ 0.13
CCNA1-201ENST00000255465 NLRP1Q9C000 1473 aa15.84■□□□□ 0.13
CCNA1-201ENST00000255465 NEFMP07197 916 aa15.84■□□□□ 0.13
CCNA1-201ENST00000255465 SYNMO15061 1565 aa15.83■□□□□ 0.12
CCNA1-201ENST00000255465 NOS1P29475 1434 aa15.83■□□□□ 0.12
CCNA1-201ENST00000255465 STRCQ7RTU9 1775 aa15.83■□□□□ 0.12
CCNA1-201ENST00000255465 TIMELESSQ9UNS1 1208 aa15.81■□□□□ 0.12
CCNA1-201ENST00000255465 RAB3GAP2Q9H2M9 1393 aa15.81■□□□□ 0.12
CCNA1-201ENST00000255465 UBR1Q8IWV7 1749 aa15.81■□□□□ 0.12
CCNA1-201ENST00000255465 UGGT1Q9NYU2 1555 aa15.8■□□□□ 0.12
CCNA1-201ENST00000255465 HSP90AA2PQ14568 343 aaPredicted RBP15.8■□□□□ 0.12
CCNA1-201ENST00000255465 SPHKAPQ2M3C7 1700 aa15.8■□□□□ 0.12
CCNA1-201ENST00000255465 PIK3C2BO00750 1634 aa15.8■□□□□ 0.12
CCNA1-201ENST00000255465 GSE1Q14687 1217 aa15.8■□□□□ 0.12
CCNA1-201ENST00000255465 TAF7LQ5H9L4 462 aa15.79■□□□□ 0.12
CCNA1-201ENST00000255465 CENPJQ9HC77 1338 aaPredicted RBP15.79■□□□□ 0.12
CCNA1-201ENST00000255465 SLC4A1APQ9BWU0 796 aaKnown RBP15.78■□□□□ 0.12
CCNA1-201ENST00000255465 BRPF3Q9ULD4 1205 aa15.78■□□□□ 0.12
CCNA1-201ENST00000255465 MYO5BQ9ULV0 1848 aa15.77■□□□□ 0.12
CCNA1-201ENST00000255465 IDI1Q13907 227 aa15.77■□□□□ 0.11
CCNA1-201ENST00000255465 ARXQ96QS3 562 aa15.77■□□□□ 0.11
CCNA1-201ENST00000255465 KDM5AP29375 1690 aaKnown RBP15.77■□□□□ 0.11
CCNA1-201ENST00000255465 THEMISQ8N1K5 641 aaPredicted RBP15.76■□□□□ 0.11
CCNA1-201ENST00000255465 SLC52A1Q9NWF4 448 aa15.76■□□□□ 0.11
CCNA1-201ENST00000255465 PLA2R1Q13018 1463 aa15.76■□□□□ 0.11
CCNA1-201ENST00000255465 PKD2Q13563 968 aa15.76■□□□□ 0.11
CCNA1-201ENST00000255465 POLR1AO95602 1720 aaPredicted RBP15.75■□□□□ 0.11
CCNA1-201ENST00000255465 NCBP3Q53F19 620 aaKnown RBP15.75■□□□□ 0.11
CCNA1-201ENST00000255465 PTPRTO14522 1441 aa15.74■□□□□ 0.11
CCNA1-201ENST00000255465 DHX57Q6P158 1386 aaKnown RBP15.74■□□□□ 0.11
CCNA1-201ENST00000255465 MPHOSPH9Q99550 1183 aa15.74■□□□□ 0.11
CCNA1-201ENST00000255465 STAG3Q9UJ98 1225 aa15.72■□□□□ 0.11
CCNA1-201ENST00000255465 ADGRB3O60242 1522 aa15.72■□□□□ 0.11
CCNA1-201ENST00000255465 NCKAP5LQ9HCH0 1330 aa15.72■□□□□ 0.11
CCNA1-201ENST00000255465 CALD1Q05682 793 aaKnown RBP15.71■□□□□ 0.11
CCNA1-201ENST00000255465 TMEM131LA2VDJ0 1609 aa15.71■□□□□ 0.11
CCNA1-201ENST00000255465 TRPM2O94759 1503 aa15.71■□□□□ 0.11
CCNA1-201ENST00000255465 HSP90AA1P07900 732 aaKnown RBP15.71■□□□□ 0.11
CCNA1-201ENST00000255465 ZNF326Q5BKZ1 582 aaKnown RBP15.71■□□□□ 0.11
CCNA1-201ENST00000255465 FOXD1Q16676 465 aa15.7■□□□□ 0.1
CCNA1-201ENST00000255465 CLTCL1P53675 1640 aa15.7■□□□□ 0.1
CCNA1-201ENST00000255465 KIF1BO60333 1816 aa15.7■□□□□ 0.1
CCNA1-201ENST00000255465 DMRT2Q9Y5R5 561 aa15.69■□□□□ 0.1
CCNA1-201ENST00000255465 SLIT1O75093 1534 aa15.69■□□□□ 0.1
CCNA1-201ENST00000255465 ARHGAP23Q9P227 1491 aa15.69■□□□□ 0.1
CCNA1-201ENST00000255465 ANKLE2Q86XL3 938 aa15.69■□□□□ 0.1
CCNA1-201ENST00000255465 NEURL4Q96JN8 1562 aa15.68■□□□□ 0.1
CCNA1-201ENST00000255465 A0A0U1RQG5 324 aaPredicted RBP15.68■□□□□ 0.1
CCNA1-201ENST00000255465 TMEM2Q9UHN6 1383 aa15.67■□□□□ 0.1
CCNA1-201ENST00000255465 CHGAP10645 457 aaKnown RBP15.67■□□□□ 0.1
CCNA1-201ENST00000255465 MED14O60244 1454 aa15.65■□□□□ 0.1
CCNA1-201ENST00000255465 SCAF11Q99590 1463 aaKnown RBP15.65■□□□□ 0.1
CCNA1-201ENST00000255465 IQGAP1P46940 1657 aa15.64■□□□□ 0.09
CCNA1-201ENST00000255465 LTKP29376 864 aa15.64■□□□□ 0.09
CCNA1-201ENST00000255465 TXNDC2Q86VQ3 553 aa15.64■□□□□ 0.09
CCNA1-201ENST00000255465 ANP32CO43423 234 aa15.63■□□□□ 0.09
CCNA1-201ENST00000255465 EID1Q9Y6B2 187 aa15.63■□□□□ 0.09
CCNA1-201ENST00000255465 BCL11BQ9C0K0 894 aaPredicted RBP15.63■□□□□ 0.09
CCNA1-201ENST00000255465 NPHP4O75161 1426 aaPredicted RBP15.62■□□□□ 0.09
CCNA1-201ENST00000255465 PPP1R15AO75807 674 aaPredicted RBP15.62■□□□□ 0.09
CCNA1-201ENST00000255465 ZFYVE9O95405 1425 aa15.62■□□□□ 0.09
CCNA1-201ENST00000255465 RIMS2Q9UQ26 1411 aa15.61■□□□□ 0.09
CCNA1-201ENST00000255465 CCDC144AA2RUR9 1427 aa15.61■□□□□ 0.09
CCNA1-201ENST00000255465 FBXO41Q8TF61 875 aa15.59■□□□□ 0.09
CCNA1-201ENST00000255465 HDGFP51858 240 aaKnown RBP15.58■□□□□ 0.08
CCNA1-201ENST00000255465 DDRGK1Q96HY6 314 aa15.58■□□□□ 0.08
CCNA1-201ENST00000255465 ANKRD30BQ9BXX2 1392 aa15.57■□□□□ 0.08
CCNA1-201ENST00000255465 NCLP19338 710 aaKnown RBP15.57■□□□□ 0.08
CCNA1-201ENST00000255465 NUTM2DQ5VT03 806 aaPredicted RBP15.57■□□□□ 0.08
CCNA1-201ENST00000255465 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.57■□□□□ 0.08
CCNA1-201ENST00000255465 PDCL3Q9H2J4 239 aa15.57■□□□□ 0.08
CCNA1-201ENST00000255465 PRDM4Q9UKN5 801 aa15.57■□□□□ 0.08
CCNA1-201ENST00000255465 NEXMIFQ5QGS0 1516 aa15.56■□□□□ 0.08
CCNA1-201ENST00000255465 PPLO60437 1756 aa15.56■□□□□ 0.08
CCNA1-201ENST00000255465 PLEKHG1Q9ULL1 1385 aa15.54■□□□□ 0.08
CCNA1-201ENST00000255465 ZNF335Q9H4Z2 1342 aaPredicted RBP15.54■□□□□ 0.08
CCNA1-201ENST00000255465 SPATA31E1Q6ZUB1 1445 aa15.54■□□□□ 0.08
CCNA1-201ENST00000255465 LTBP4Q8N2S1 1624 aa15.54■□□□□ 0.08
CCNA1-201ENST00000255465 IFT172Q9UG01 1749 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms