RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 CHD1O14646 1710 aa23.07■■□□□ 1.28
PTPN12-201ENST00000248594 PDIA4P13667 645 aaKnown RBP23.07■■□□□ 1.28
PTPN12-201ENST00000248594 HNRNPMP52272 730 aaKnown RBP eCLIP23.06■■□□□ 1.28
PTPN12-201ENST00000248594 CEP170Q5SW79 1584 aa23.05■■□□□ 1.28
PTPN12-201ENST00000248594 ZSCAN30Q86W11 494 aa23.05■■□□□ 1.28
PTPN12-201ENST00000248594 IQGAP2Q13576 1575 aa23.04■■□□□ 1.28
PTPN12-201ENST00000248594 DNTTIP2Q5QJE6 756 aaKnown RBP23.04■■□□□ 1.28
PTPN12-201ENST00000248594 BBXQ8WY36 941 aaPredicted RBP23.04■■□□□ 1.28
PTPN12-201ENST00000248594 MAPK8IP2Q13387 824 aaPredicted RBP23.04■■□□□ 1.28
PTPN12-201ENST00000248594 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.04■■□□□ 1.28
PTPN12-201ENST00000248594 NUP155O75694 1391 aa23.03■■□□□ 1.28
PTPN12-201ENST00000248594 TNPO1Q92973 898 aaKnown RBP23.03■■□□□ 1.28
PTPN12-201ENST00000248594 RRP7AQ9Y3A4 280 aaKnown RBP23.02■■□□□ 1.28
PTPN12-201ENST00000248594 DDX49Q9Y6V7 483 aaKnown RBP23.02■■□□□ 1.28
PTPN12-201ENST00000248594 KIAA0586Q9BVV6 1533 aa23.01■■□□□ 1.27
PTPN12-201ENST00000248594 TPRNQ4KMQ1 711 aa23.01■■□□□ 1.27
PTPN12-201ENST00000248594 KNSTRNQ9Y448 316 aa23.01■■□□□ 1.27
PTPN12-201ENST00000248594 NUP160Q12769 1436 aa23■■□□□ 1.27
PTPN12-201ENST00000248594 TSC1Q92574 1164 aa23■■□□□ 1.27
PTPN12-201ENST00000248594 JARID2Q92833 1246 aaPredicted RBP22.99■■□□□ 1.27
PTPN12-201ENST00000248594 GBP4Q96PP9 640 aa22.99■■□□□ 1.27
PTPN12-201ENST00000248594 DMRT2Q9Y5R5 561 aa22.99■■□□□ 1.27
PTPN12-201ENST00000248594 SLFN5Q08AF3 891 aa22.99■■□□□ 1.27
PTPN12-201ENST00000248594 OFD1O75665 1012 aa22.99■■□□□ 1.27
PTPN12-201ENST00000248594 PCDHB15Q9Y5E8 787 aa22.99■■□□□ 1.27
PTPN12-201ENST00000248594 EFCAB5A4FU69 1503 aa22.98■■□□□ 1.27
PTPN12-201ENST00000248594 IGSF3O75054 1194 aa22.98■■□□□ 1.27
PTPN12-201ENST00000248594 CENPJQ9HC77 1338 aaPredicted RBP22.97■■□□□ 1.27
PTPN12-201ENST00000248594 FAM177BA6PVY3 158 aa22.97■■□□□ 1.27
PTPN12-201ENST00000248594 CBX1P83916 185 aa22.96■■□□□ 1.27
PTPN12-201ENST00000248594 PRG4Q92954 1404 aaPredicted RBP22.96■■□□□ 1.27
PTPN12-201ENST00000248594 PARD3Q8TEW0 1356 aa22.96■■□□□ 1.27
PTPN12-201ENST00000248594 PER1O15534 1290 aaPredicted RBP22.96■■□□□ 1.27
PTPN12-201ENST00000248594 SAMD9Q5K651 1589 aa22.96■■□□□ 1.27
PTPN12-201ENST00000248594 CCDC173Q0VFZ6 552 aa22.95■■□□□ 1.27
PTPN12-201ENST00000248594 CGNL1Q0VF96 1302 aa22.95■■□□□ 1.26
PTPN12-201ENST00000248594 TNNT2P45379 298 aaPredicted RBP22.95■■□□□ 1.26
PTPN12-201ENST00000248594 PTMAP06454 111 aaKnown RBP22.94■■□□□ 1.26
PTPN12-201ENST00000248594 ABCC5O15440 1437 aa22.93■■□□□ 1.26
PTPN12-201ENST00000248594 SUPT6HQ7KZ85 1726 aaKnown RBP22.93■■□□□ 1.26
PTPN12-201ENST00000248594 CAVIN1Q6NZI2 390 aaKnown RBP22.92■■□□□ 1.26
PTPN12-201ENST00000248594 UGGT2Q9NYU1 1516 aa22.92■■□□□ 1.26
PTPN12-201ENST00000248594 GOLGA6L22H0YM25 854 aa22.91■■□□□ 1.26
PTPN12-201ENST00000248594 PPP2R1AP30153 589 aa22.91■■□□□ 1.26
PTPN12-201ENST00000248594 DAPK1P53355 1430 aa22.91■■□□□ 1.26
PTPN12-201ENST00000248594 EPRSP07814 1512 aaKnown RBP22.91■■□□□ 1.26
PTPN12-201ENST00000248594 LRRIQ1Q96JM4 1722 aa22.91■■□□□ 1.26
PTPN12-201ENST00000248594 FOXD4L5Q5VV16 416 aaPredicted RBP22.91■■□□□ 1.26
PTPN12-201ENST00000248594 RNF214Q8ND24 703 aa22.91■■□□□ 1.26
PTPN12-201ENST00000248594 FOXD4L4Q8WXT5 416 aaPredicted RBP22.91■■□□□ 1.26
PTPN12-201ENST00000248594 HECW1Q76N89 1606 aa22.9■■□□□ 1.26
PTPN12-201ENST00000248594 TSPY4P0CV99 314 aa22.9■■□□□ 1.26
PTPN12-201ENST00000248594 TSPY10P0CW01 314 aa22.9■■□□□ 1.26
PTPN12-201ENST00000248594 SSFA2P28290 1259 aa22.9■■□□□ 1.26
PTPN12-201ENST00000248594 PMFBP1Q8TBY8 1022 aa22.89■■□□□ 1.26
PTPN12-201ENST00000248594 CHMP4BQ9H444 224 aaKnown RBP22.89■■□□□ 1.26
PTPN12-201ENST00000248594 VGLL3A8MV65 326 aa22.89■■□□□ 1.25
PTPN12-201ENST00000248594 RLBP1P12271 317 aa22.89■■□□□ 1.25
PTPN12-201ENST00000248594 MAP7D2Q96T17 732 aa22.88■■□□□ 1.25
PTPN12-201ENST00000248594 RWDD1Q9H446 243 aaPredicted RBP22.87■■□□□ 1.25
PTPN12-201ENST00000248594 MCTP1Q6DN14 999 aa22.86■■□□□ 1.25
PTPN12-201ENST00000248594 EHBP1L1Q8N3D4 1523 aa22.85■■□□□ 1.25
PTPN12-201ENST00000248594 FTSJ3Q8IY81 847 aaKnown RBP22.85■■□□□ 1.25
PTPN12-201ENST00000248594 EIF3AQ14152 1382 aaKnown RBP22.85■■□□□ 1.25
PTPN12-201ENST00000248594 RBM42Q9BTD8 480 aaKnown RBP22.84■■□□□ 1.25
PTPN12-201ENST00000248594 TMF1P82094 1093 aa22.84■■□□□ 1.25
PTPN12-201ENST00000248594 PLCD3Q8N3E9 789 aa22.84■■□□□ 1.25
PTPN12-201ENST00000248594 SMAP1Q8IYB5 467 aaPredicted RBP22.83■■□□□ 1.25
PTPN12-201ENST00000248594 SPDYE4A6NLX3 237 aa22.83■■□□□ 1.25
PTPN12-201ENST00000248594 JPH4Q96JJ6 628 aa22.83■■□□□ 1.25
PTPN12-201ENST00000248594 E9PSI1 815 aa22.83■■□□□ 1.24
PTPN12-201ENST00000248594 DISP1Q96F81 1524 aa22.83■■□□□ 1.24
PTPN12-201ENST00000248594 DISP3Q9P2K9 1392 aa22.82■■□□□ 1.24
PTPN12-201ENST00000248594 KIAA0556O60303 1618 aa22.81■■□□□ 1.24
PTPN12-201ENST00000248594 SKOR2Q2VWA4 1001 aaPredicted RBP22.81■■□□□ 1.24
PTPN12-201ENST00000248594 RBM27Q9P2N5 1060 aaKnown RBP22.81■■□□□ 1.24
PTPN12-201ENST00000248594 ISY1Q9ULR0 285 aaKnown RBP22.8■■□□□ 1.24
PTPN12-201ENST00000248594 BLMP54132 1417 aaPredicted RBP22.8■■□□□ 1.24
PTPN12-201ENST00000248594 PDE3AQ14432 1141 aa22.79■■□□□ 1.24
PTPN12-201ENST00000248594 LNPKQ9C0E8 428 aa22.79■■□□□ 1.24
PTPN12-201ENST00000248594 KIAA1107Q9UPP5 1409 aa22.79■■□□□ 1.24
PTPN12-201ENST00000248594 ZMYM4Q5VZL5 1548 aa22.78■■□□□ 1.24
PTPN12-201ENST00000248594 FOXD4L6Q3SYB3 417 aaPredicted RBP22.78■■□□□ 1.24
PTPN12-201ENST00000248594 FOXD4L3Q6VB84 417 aaPredicted RBP22.78■■□□□ 1.24
PTPN12-201ENST00000248594 CHAMP1Q96JM3 812 aa22.78■■□□□ 1.24
PTPN12-201ENST00000248594 PLEKHD1A6NEE1 506 aa22.78■■□□□ 1.24
PTPN12-201ENST00000248594 NLRP1Q9C000 1473 aa22.76■■□□□ 1.23
PTPN12-201ENST00000248594 KDM5CP41229 1560 aa22.76■■□□□ 1.23
PTPN12-201ENST00000248594 PLCB2Q00722 1185 aa22.76■■□□□ 1.23
PTPN12-201ENST00000248594 RBSNQ9H1K0 784 aa22.76■■□□□ 1.23
PTPN12-201ENST00000248594 CLASP1Q7Z460 1538 aa22.76■■□□□ 1.23
PTPN12-201ENST00000248594 CD2BP2O95400 341 aaKnown RBP22.76■■□□□ 1.23
PTPN12-201ENST00000248594 ITPRIPQ8IWB1 547 aa22.76■■□□□ 1.23
PTPN12-201ENST00000248594 ZNF692Q9BU19 519 aaPredicted RBP22.75■■□□□ 1.23
PTPN12-201ENST00000248594 ZNF830Q96NB3 372 aaPredicted RBP22.75■■□□□ 1.23
PTPN12-201ENST00000248594 SHROOM2Q13796 1616 aa22.74■■□□□ 1.23
PTPN12-201ENST00000248594 PPP1R9BQ96SB3 815 aa22.74■■□□□ 1.23
PTPN12-201ENST00000248594 PPP4R3BQ5MIZ7 849 aa22.74■■□□□ 1.23
PTPN12-201ENST00000248594 NAP1L2Q9ULW6 460 aaPredicted RBP22.74■■□□□ 1.23
PTPN12-201ENST00000248594 NKTRP30414 1462 aaKnown RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms