RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 NLRP13Q86W25 1043 aa20.83■□□□□ 0.92
CTSD-201ENST00000236671 ERBINQ96RT1 1412 aa20.82■□□□□ 0.92
CTSD-201ENST00000236671 MADDQ8WXG6 1647 aa20.82■□□□□ 0.92
CTSD-201ENST00000236671 NBPF1Q3BBV0 1214 aa20.81■□□□□ 0.92
CTSD-201ENST00000236671 CFAP65Q6ZU64 1925 aaKnown RBP20.81■□□□□ 0.92
CTSD-201ENST00000236671 AGLP35573 1532 aa20.8■□□□□ 0.92
CTSD-201ENST00000236671 KDM4FA0A1W2PPD8 638 aa20.8■□□□□ 0.92
CTSD-201ENST00000236671 PER1O15534 1290 aaPredicted RBP20.8■□□□□ 0.92
CTSD-201ENST00000236671 CEP152O94986 1710 aa20.79■□□□□ 0.92
CTSD-201ENST00000236671 EIF2AK4Q9P2K8 1649 aaKnown RBP20.79■□□□□ 0.92
CTSD-201ENST00000236671 FER1L4A9Z1Z3 1794 aa20.79■□□□□ 0.92
CTSD-201ENST00000236671 RGL3Q3MIN7 710 aa20.78■□□□□ 0.92
CTSD-201ENST00000236671 CLTCQ00610 1675 aaKnown RBP20.78■□□□□ 0.92
CTSD-201ENST00000236671 RRP1P56182 461 aaKnown RBP20.78■□□□□ 0.92
CTSD-201ENST00000236671 DISP3Q9P2K9 1392 aa20.77■□□□□ 0.92
CTSD-201ENST00000236671 TESK2Q96S53 571 aa20.77■□□□□ 0.92
CTSD-201ENST00000236671 RNF17Q9BXT8 1623 aaKnown RBP20.77■□□□□ 0.92
CTSD-201ENST00000236671 RIMS1Q86UR5 1692 aaKnown RBP20.77■□□□□ 0.91
CTSD-201ENST00000236671 BCL11AQ9H165 835 aa20.77■□□□□ 0.91
CTSD-201ENST00000236671 DEPDC5O75140 1603 aa20.77■□□□□ 0.91
CTSD-201ENST00000236671 ADAMTSL3P82987 1691 aa20.76■□□□□ 0.91
CTSD-201ENST00000236671 CEBPAP49715 358 aaPredicted RBP20.75■□□□□ 0.91
CTSD-201ENST00000236671 NOP58Q9Y2X3 529 aaKnown RBP20.74■□□□□ 0.91
CTSD-201ENST00000236671 WASHC2CQ9Y4E1 1318 aa20.74■□□□□ 0.91
CTSD-201ENST00000236671 PDE3BQ13370 1112 aa20.73■□□□□ 0.91
CTSD-201ENST00000236671 RCAN3Q9UKA8 241 aa20.73■□□□□ 0.91
CTSD-201ENST00000236671 INSRP06213 1382 aa20.72■□□□□ 0.91
CTSD-201ENST00000236671 BLMP54132 1417 aaPredicted RBP20.72■□□□□ 0.91
CTSD-201ENST00000236671 EXOC6Q8TAG9 804 aa20.69■□□□□ 0.9
CTSD-201ENST00000236671 ABCC3O15438 1527 aa20.69■□□□□ 0.9
CTSD-201ENST00000236671 SALL2Q9Y467 1007 aaPredicted RBP20.68■□□□□ 0.9
CTSD-201ENST00000236671 PAK3O75914 559 aaPredicted RBP20.68■□□□□ 0.9
CTSD-201ENST00000236671 CC2D1BQ5T0F9 858 aaKnown RBP20.67■□□□□ 0.9
CTSD-201ENST00000236671 PANK3Q9H999 370 aa20.67■□□□□ 0.9
CTSD-201ENST00000236671 C3P01024 1663 aa20.67■□□□□ 0.9
CTSD-201ENST00000236671 ESF1Q9H501 851 aaKnown RBP20.66■□□□□ 0.9
CTSD-201ENST00000236671 VWDEQ8N2E2 1590 aa20.66■□□□□ 0.9
CTSD-201ENST00000236671 CAMSAP1Q5T5Y3 1602 aa20.65■□□□□ 0.9
CTSD-201ENST00000236671 ANP32AP39687 249 aaKnown RBP20.65■□□□□ 0.9
CTSD-201ENST00000236671 TMF1P82094 1093 aa20.65■□□□□ 0.9
CTSD-201ENST00000236671 FBXO31Q5XUX0 539 aaPredicted RBP20.65■□□□□ 0.9
CTSD-201ENST00000236671 CDCA7LQ96GN5 454 aa20.65■□□□□ 0.9
CTSD-201ENST00000236671 IPO9Q96P70 1041 aaKnown RBP20.64■□□□□ 0.89
CTSD-201ENST00000236671 PTPRMP28827 1452 aa20.63■□□□□ 0.89
CTSD-201ENST00000236671 ZMYM3Q14202 1370 aa20.63■□□□□ 0.89
CTSD-201ENST00000236671 IQGAP1P46940 1657 aa20.61■□□□□ 0.89
CTSD-201ENST00000236671 KANK1Q14678 1352 aa20.61■□□□□ 0.89
CTSD-201ENST00000236671 ZC3H13Q5T200 1668 aaKnown RBP20.6■□□□□ 0.89
CTSD-201ENST00000236671 NPATQ14207 1427 aa20.6■□□□□ 0.89
CTSD-201ENST00000236671 TCERG1O14776 1098 aaKnown RBP20.59■□□□□ 0.89
CTSD-201ENST00000236671 EFCAB6Q5THR3 1501 aa20.58■□□□□ 0.89
CTSD-201ENST00000236671 TET3O43151 1660 aa20.58■□□□□ 0.89
CTSD-201ENST00000236671 TRPM2O94759 1503 aa20.58■□□□□ 0.88
CTSD-201ENST00000236671 MROH2AA6NES4 1674 aa20.57■□□□□ 0.88
CTSD-201ENST00000236671 SPHKAPQ2M3C7 1700 aa20.56■□□□□ 0.88
CTSD-201ENST00000236671 SYNMO15061 1565 aa20.55■□□□□ 0.88
CTSD-201ENST00000236671 UGGT1Q9NYU2 1555 aa20.55■□□□□ 0.88
CTSD-201ENST00000236671 LMTK2Q8IWU2 1503 aa20.54■□□□□ 0.88
CTSD-201ENST00000236671 PREX1Q8TCU6 1659 aa20.54■□□□□ 0.88
CTSD-201ENST00000236671 ZBTB47Q9UFB7 747 aaPredicted RBP20.53■□□□□ 0.88
CTSD-201ENST00000236671 PTPRTO14522 1441 aa20.52■□□□□ 0.88
CTSD-201ENST00000236671 PLIN1O60240 522 aa20.52■□□□□ 0.88
CTSD-201ENST00000236671 PPP6R1Q9UPN7 881 aa20.52■□□□□ 0.88
CTSD-201ENST00000236671 CLTCL1P53675 1640 aa20.52■□□□□ 0.87
CTSD-201ENST00000236671 DEKP35659 375 aaKnown RBP20.51■□□□□ 0.87
CTSD-201ENST00000236671 NBR1Q14596 966 aa20.51■□□□□ 0.87
CTSD-201ENST00000236671 SCAF11Q99590 1463 aaKnown RBP20.51■□□□□ 0.87
CTSD-201ENST00000236671 MS4A1P11836 297 aa20.51■□□□□ 0.87
CTSD-201ENST00000236671 ADAMTS8Q9UP79 889 aa20.51■□□□□ 0.87
CTSD-201ENST00000236671 PDE4AP27815 886 aa20.5■□□□□ 0.87
CTSD-201ENST00000236671 PPP2R1AP30153 589 aa20.5■□□□□ 0.87
CTSD-201ENST00000236671 AMER1Q5JTC6 1135 aaPredicted RBP20.5■□□□□ 0.87
CTSD-201ENST00000236671 CRBNQ96SW2 442 aa20.49■□□□□ 0.87
CTSD-201ENST00000236671 KNSTRNQ9Y448 316 aa20.49■□□□□ 0.87
CTSD-201ENST00000236671 BACH2Q9BYV9 841 aa20.48■□□□□ 0.87
CTSD-201ENST00000236671 MYOM1P52179 1685 aa20.48■□□□□ 0.87
CTSD-201ENST00000236671 ERVK-7P63135 1459 aa20.48■□□□□ 0.87
CTSD-201ENST00000236671 PLEKHH1Q9ULM0 1364 aa20.47■□□□□ 0.87
CTSD-201ENST00000236671 ASXL1Q8IXJ9 1541 aa20.47■□□□□ 0.87
CTSD-201ENST00000236671 STAC3Q96MF2 364 aa20.46■□□□□ 0.87
CTSD-201ENST00000236671 CDCA8Q53HL2 280 aa20.45■□□□□ 0.86
CTSD-201ENST00000236671 ARHGAP31Q2M1Z3 1444 aa20.45■□□□□ 0.86
CTSD-201ENST00000236671 SPATA31D1Q6ZQQ2 1576 aa20.45■□□□□ 0.86
CTSD-201ENST00000236671 PIK3C2GO75747 1445 aa20.45■□□□□ 0.86
CTSD-201ENST00000236671 ZNF521Q96K83 1311 aa20.44■□□□□ 0.86
CTSD-201ENST00000236671 NPM2Q86SE8 214 aaKnown RBP20.44■□□□□ 0.86
CTSD-201ENST00000236671 KIAA1210Q9ULL0 1709 aa20.44■□□□□ 0.86
CTSD-201ENST00000236671 MYO3AQ8NEV4 1616 aa20.43■□□□□ 0.86
CTSD-201ENST00000236671 MYO5BQ9ULV0 1848 aa20.43■□□□□ 0.86
CTSD-201ENST00000236671 WDR43Q15061 677 aaKnown RBP eCLIP20.43■□□□□ 0.86
CTSD-201ENST00000236671 NPC1L1Q9UHC9 1359 aa20.42■□□□□ 0.86
CTSD-201ENST00000236671 C20orf194Q5TEA3 1177 aa20.42■□□□□ 0.86
CTSD-201ENST00000236671 DUSP27Q5VZP5 1158 aa20.42■□□□□ 0.86
CTSD-201ENST00000236671 NOS1P29475 1434 aa20.42■□□□□ 0.86
CTSD-201ENST00000236671 SETD1BQ9UPS6 1966 aaKnown RBP20.42■□□□□ 0.86
CTSD-201ENST00000236671 NEURL4Q96JN8 1562 aa20.42■□□□□ 0.86
CTSD-201ENST00000236671 TNRQ92752 1358 aa20.42■□□□□ 0.86
CTSD-201ENST00000236671 IDI1Q13907 227 aa20.41■□□□□ 0.86
CTSD-201ENST00000236671 SENP3Q9H4L4 574 aaPredicted RBP20.41■□□□□ 0.86
CTSD-201ENST00000236671 EIF3AQ14152 1382 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms