RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 UACAQ9BZF9 1416 aa9.98□□□□□ -0.81
APOB-201ENST00000233242 CCDC73Q6ZRK6 1079 aa9.98□□□□□ -0.81
APOB-201ENST00000233242 KIF7Q2M1P5 1343 aa9.98□□□□□ -0.81
APOB-201ENST00000233242 NINLQ9Y2I6 1382 aa9.97□□□□□ -0.81
APOB-201ENST00000233242 PANK3Q9H999 370 aa9.97□□□□□ -0.81
APOB-201ENST00000233242 RRP12Q5JTH9 1297 aaKnown RBP9.97□□□□□ -0.81
APOB-201ENST00000233242 PDCL2Q8N4E4 241 aa9.97□□□□□ -0.81
APOB-201ENST00000233242 CCDC88BA6NC98 1476 aa9.97□□□□□ -0.81
APOB-201ENST00000233242 PLPPR3Q6T4P5 718 aa9.97□□□□□ -0.81
APOB-201ENST00000233242 COG6Q9Y2V7 657 aa9.97□□□□□ -0.81
APOB-201ENST00000233242 CCDC191Q8NCU4 936 aa9.97□□□□□ -0.81
APOB-201ENST00000233242 CIZ1Q9ULV3 898 aaPredicted RBP9.97□□□□□ -0.81
APOB-201ENST00000233242 BICD2Q8TD16 824 aa9.97□□□□□ -0.81
APOB-201ENST00000233242 LEKR1Q6ZMV7 388 aa9.96□□□□□ -0.81
APOB-201ENST00000233242 MCTP1Q6DN14 999 aa9.96□□□□□ -0.81
APOB-201ENST00000233242 ESPNB1AK53 854 aa9.96□□□□□ -0.82
APOB-201ENST00000233242 CDC45O75419 566 aa9.96□□□□□ -0.82
APOB-201ENST00000233242 EIF4G1Q04637 1599 aaKnown RBP9.96□□□□□ -0.82
APOB-201ENST00000233242 ST20-MTHFSA0A0A6YYL1 179 aa9.96□□□□□ -0.82
APOB-201ENST00000233242 RABEP1Q15276 862 aa9.96□□□□□ -0.82
APOB-201ENST00000233242 TSPY26PQ9H489 355 aa9.96□□□□□ -0.82
APOB-201ENST00000233242 H0YHG0 523 aa9.95□□□□□ -0.82
APOB-201ENST00000233242 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.95□□□□□ -0.82
APOB-201ENST00000233242 CCDC7Q96M83 1385 aa9.95□□□□□ -0.82
APOB-201ENST00000233242 CWC22Q9HCG8 908 aaKnown RBP9.95□□□□□ -0.82
APOB-201ENST00000233242 SMC3Q9UQE7 1217 aa9.95□□□□□ -0.82
APOB-201ENST00000233242 USP8P40818 1118 aa9.95□□□□□ -0.82
APOB-201ENST00000233242 IL27Q8NEV9 243 aa9.95□□□□□ -0.82
APOB-201ENST00000233242 CCDC144AA2RUR9 1427 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 PDCP20941 246 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 CREBRFQ8IUR6 639 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 BACH2Q9BYV9 841 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 SLC4A10Q6U841 1118 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 CCDC47Q96A33 483 aaKnown RBP9.94□□□□□ -0.82
APOB-201ENST00000233242 PES1O00541 588 aaKnown RBP9.94□□□□□ -0.82
APOB-201ENST00000233242 FRAT2O75474 233 aaPredicted RBP9.94□□□□□ -0.82
APOB-201ENST00000233242 STAC3Q96MF2 364 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 CARMIL2Q6F5E8 1435 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 AKAP17AQ02040 695 aaKnown RBP9.94□□□□□ -0.82
APOB-201ENST00000233242 RILPL2Q969X0 211 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 MIA2Q96PC5 1412 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 ABCC8Q09428 1581 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 SENP3Q9H4L4 574 aaPredicted RBP9.93□□□□□ -0.82
APOB-201ENST00000233242 GRPEL1Q9HAV7 217 aa9.93□□□□□ -0.82
APOB-201ENST00000233242 LMOD2Q6P5Q4 547 aa9.93□□□□□ -0.82
APOB-201ENST00000233242 HSP90AB4PQ58FF6 505 aa9.93□□□□□ -0.82
APOB-201ENST00000233242 TRIM29Q14134 588 aa9.92□□□□□ -0.82
APOB-201ENST00000233242 SYNE3Q6ZMZ3 975 aa9.92□□□□□ -0.82
APOB-201ENST00000233242 MYO6Q9UM54 1294 aa9.92□□□□□ -0.82
APOB-201ENST00000233242 PDE3AQ14432 1141 aa9.92□□□□□ -0.82
APOB-201ENST00000233242 TRIM5Q9C035 493 aa9.92□□□□□ -0.82
APOB-201ENST00000233242 CPLX1O14810 134 aa9.91□□□□□ -0.82
APOB-201ENST00000233242 PDIA4P13667 645 aaKnown RBP9.91□□□□□ -0.82
APOB-201ENST00000233242 CCDC112Q8NEF3 446 aa9.91□□□□□ -0.82
APOB-201ENST00000233242 RAPGEF2Q9Y4G8 1499 aa9.91□□□□□ -0.82
APOB-201ENST00000233242 WASHC2AQ641Q2 1341 aa9.91□□□□□ -0.82
APOB-201ENST00000233242 WASHC2CQ9Y4E1 1318 aa9.91□□□□□ -0.82
APOB-201ENST00000233242 ANO2Q9NQ90 1003 aa9.91□□□□□ -0.82
APOB-201ENST00000233242 ZSCAN30Q86W11 494 aa9.91□□□□□ -0.82
APOB-201ENST00000233242 ERC2O15083 957 aa9.91□□□□□ -0.82
APOB-201ENST00000233242 TAF7LQ5H9L4 462 aa9.9□□□□□ -0.82
APOB-201ENST00000233242 UQCRHLA0A096LP55 91 aa9.9□□□□□ -0.82
APOB-201ENST00000233242 UQCRHP07919 91 aa9.9□□□□□ -0.82
APOB-201ENST00000233242 UBE2Q2Q8WVN8 375 aa9.9□□□□□ -0.82
APOB-201ENST00000233242 PLEKHG5O94827 1062 aa9.9□□□□□ -0.82
APOB-201ENST00000233242 KIF2AO00139 706 aaPredicted RBP9.9□□□□□ -0.82
APOB-201ENST00000233242 APAF1O14727 1248 aa9.9□□□□□ -0.82
APOB-201ENST00000233242 VPS37CA5D8V6 355 aaPredicted RBP9.9□□□□□ -0.82
APOB-201ENST00000233242 RUNDC1Q96C34 613 aa9.9□□□□□ -0.83
APOB-201ENST00000233242 SMG6Q86US8 1419 aaKnown RBP9.89□□□□□ -0.83
APOB-201ENST00000233242 ERLIN1O75477 346 aa9.89□□□□□ -0.83
APOB-201ENST00000233242 SAFB2Q14151 953 aaKnown RBP eCLIP9.89□□□□□ -0.83
APOB-201ENST00000233242 EIF3JO75822 258 aaKnown RBP9.89□□□□□ -0.83
APOB-201ENST00000233242 CECR2Q9BXF3 1484 aa9.89□□□□□ -0.83
APOB-201ENST00000233242 FOXD4L6Q3SYB3 417 aaPredicted RBP9.89□□□□□ -0.83
APOB-201ENST00000233242 FOXD4L3Q6VB84 417 aaPredicted RBP9.89□□□□□ -0.83
APOB-201ENST00000233242 DEF6Q9H4E7 631 aa9.89□□□□□ -0.83
APOB-201ENST00000233242 TOP2AP11388 1531 aaKnown RBP9.89□□□□□ -0.83
APOB-201ENST00000233242 EFCAB2Q5VUJ9 269 aa9.89□□□□□ -0.83
APOB-201ENST00000233242 PSMA5P28066 241 aa9.89□□□□□ -0.83
APOB-201ENST00000233242 OLFM4Q6UX06 510 aa9.89□□□□□ -0.83
APOB-201ENST00000233242 CCDC192P0DO97 292 aa9.89□□□□□ -0.83
APOB-201ENST00000233242 CT47B1P0C2W7 299 aaPredicted RBP9.89□□□□□ -0.83
APOB-201ENST00000233242 SMARCA2P51531 1590 aa9.88□□□□□ -0.83
APOB-201ENST00000233242 PDCL3Q9H2J4 239 aa9.88□□□□□ -0.83
APOB-201ENST00000233242 RRP7AQ9Y3A4 280 aaKnown RBP9.88□□□□□ -0.83
APOB-201ENST00000233242 KIAA0754O94854 1291 aa9.88□□□□□ -0.83
APOB-201ENST00000233242 PAK3O75914 559 aaPredicted RBP9.88□□□□□ -0.83
APOB-201ENST00000233242 BCL2L13Q9BXK5 485 aa9.88□□□□□ -0.83
APOB-201ENST00000233242 KINO60870 393 aaKnown RBP9.88□□□□□ -0.83
APOB-201ENST00000233242 MCM5P33992 734 aa9.88□□□□□ -0.83
APOB-201ENST00000233242 PIP4K2AP48426 406 aaPredicted RBP9.87□□□□□ -0.83
APOB-201ENST00000233242 SAFBQ15424 915 aaKnown RBP eCLIP9.87□□□□□ -0.83
APOB-201ENST00000233242 STK26Q9P289 416 aa9.87□□□□□ -0.83
APOB-201ENST00000233242 CHMP3Q9Y3E7 222 aa9.87□□□□□ -0.83
APOB-201ENST00000233242 GOLGA6L7A0A1B0GV03 622 aa9.87□□□□□ -0.83
APOB-201ENST00000233242 EVC2Q86UK5 1308 aa9.87□□□□□ -0.83
APOB-201ENST00000233242 MARCH6O60337 910 aa9.87□□□□□ -0.83
APOB-201ENST00000233242 MCM4P33991 863 aa9.87□□□□□ -0.83
APOB-201ENST00000233242 RNF214Q8ND24 703 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms