RNA–Protein interactions for RNA: ENST00000231134.7

PCDHB5-201, Transcript of protocadherin beta 5, humanhuman

APPRIS P1 BASIC

Gene PCDHB5, Length 3,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-201ENST00000231134 DMRT2Q9Y5R5 561 aa17.09■□□□□ 0.33
PCDHB5-201ENST00000231134 SSFA2P28290 1259 aa17.08■□□□□ 0.33
PCDHB5-201ENST00000231134 RWDD1Q9H446 243 aaPredicted RBP17.08■□□□□ 0.33
PCDHB5-201ENST00000231134 PLCD3Q8N3E9 789 aa17.08■□□□□ 0.32
PCDHB5-201ENST00000231134 NAP1L2Q9ULW6 460 aaPredicted RBP17.08■□□□□ 0.32
PCDHB5-201ENST00000231134 EFCAB5A4FU69 1503 aa17.07■□□□□ 0.32
PCDHB5-201ENST00000231134 SUPT6HQ7KZ85 1726 aaKnown RBP17.07■□□□□ 0.32
PCDHB5-201ENST00000231134 PPP2R1AP30153 589 aa17.07■□□□□ 0.32
PCDHB5-201ENST00000231134 RNF214Q8ND24 703 aa17.07■□□□□ 0.32
PCDHB5-201ENST00000231134 MAGI3Q5TCQ9 1506 aa17.07■□□□□ 0.32
PCDHB5-201ENST00000231134 PPP4R3BQ5MIZ7 849 aa17.06■□□□□ 0.32
PCDHB5-201ENST00000231134 BLMP54132 1417 aaPredicted RBP17.06■□□□□ 0.32
PCDHB5-201ENST00000231134 PDIA4P13667 645 aaKnown RBP17.06■□□□□ 0.32
PCDHB5-201ENST00000231134 TPRNQ4KMQ1 711 aa17.06■□□□□ 0.32
PCDHB5-201ENST00000231134 MCTP1Q6DN14 999 aa17.06■□□□□ 0.32
PCDHB5-201ENST00000231134 MTERF4Q7Z6M4 381 aaKnown RBP17.06■□□□□ 0.32
PCDHB5-201ENST00000231134 SPDYE4A6NLX3 237 aa17.05■□□□□ 0.32
PCDHB5-201ENST00000231134 DYNC1I1O14576 645 aa17.05■□□□□ 0.32
PCDHB5-201ENST00000231134 PPP1R9BQ96SB3 815 aa17.05■□□□□ 0.32
PCDHB5-201ENST00000231134 E9PSI1 815 aa17.05■□□□□ 0.32
PCDHB5-201ENST00000231134 GTF2E1P29083 439 aaPredicted RBP17.05■□□□□ 0.32
PCDHB5-201ENST00000231134 PDE3AQ14432 1141 aa17.05■□□□□ 0.32
PCDHB5-201ENST00000231134 DAPK1P53355 1430 aa17.04■□□□□ 0.32
PCDHB5-201ENST00000231134 DMTNQ08495 405 aa17.04■□□□□ 0.32
PCDHB5-201ENST00000231134 ZMYM4Q5VZL5 1548 aa17.04■□□□□ 0.32
PCDHB5-201ENST00000231134 NLRP1Q9C000 1473 aa17.04■□□□□ 0.32
PCDHB5-201ENST00000231134 RLBP1P12271 317 aa17.04■□□□□ 0.32
PCDHB5-201ENST00000231134 CDK11BP21127 795 aaKnown RBP17.03■□□□□ 0.32
PCDHB5-201ENST00000231134 CCDC94Q9BW85 323 aaPredicted RBP17.03■□□□□ 0.32
PCDHB5-201ENST00000231134 FTSJ3Q8IY81 847 aaKnown RBP17.03■□□□□ 0.32
PCDHB5-201ENST00000231134 EHBP1L1Q8N3D4 1523 aa17.02■□□□□ 0.32
PCDHB5-201ENST00000231134 ABCC5O15440 1437 aa17.02■□□□□ 0.32
PCDHB5-201ENST00000231134 TMF1P82094 1093 aa17.02■□□□□ 0.32
PCDHB5-201ENST00000231134 FOXD4L5Q5VV16 416 aaPredicted RBP17.02■□□□□ 0.32
PCDHB5-201ENST00000231134 FOXD4L4Q8WXT5 416 aaPredicted RBP17.02■□□□□ 0.32
PCDHB5-201ENST00000231134 SASS6Q6UVJ0 657 aa17.02■□□□□ 0.31
PCDHB5-201ENST00000231134 STAC3Q96MF2 364 aa17.01■□□□□ 0.31
PCDHB5-201ENST00000231134 ZNF692Q9BU19 519 aaPredicted RBP17.01■□□□□ 0.31
PCDHB5-201ENST00000231134 DISP3Q9P2K9 1392 aa17.01■□□□□ 0.31
PCDHB5-201ENST00000231134 CSPP1Q1MSJ5 1256 aa17.01■□□□□ 0.31
PCDHB5-201ENST00000231134 KDM5CP41229 1560 aa17.01■□□□□ 0.31
PCDHB5-201ENST00000231134 UGGT2Q9NYU1 1516 aa17.01■□□□□ 0.31
PCDHB5-201ENST00000231134 ZSCAN20P17040 1043 aaPredicted RBP17.01■□□□□ 0.31
PCDHB5-201ENST00000231134 AEBP2Q6ZN18 517 aaPredicted RBP17.01■□□□□ 0.31
PCDHB5-201ENST00000231134 KIAA1107Q9UPP5 1409 aa17■□□□□ 0.31
PCDHB5-201ENST00000231134 RBSNQ9H1K0 784 aa17■□□□□ 0.31
PCDHB5-201ENST00000231134 CGNQ9P2M7 1197 aaKnown RBP17■□□□□ 0.31
PCDHB5-201ENST00000231134 NOL7Q9UMY1 257 aaKnown RBP17■□□□□ 0.31
PCDHB5-201ENST00000231134 TERF1P54274 439 aa17■□□□□ 0.31
PCDHB5-201ENST00000231134 RBM42Q9BTD8 480 aaKnown RBP17■□□□□ 0.31
PCDHB5-201ENST00000231134 RBM27Q9P2N5 1060 aaKnown RBP17■□□□□ 0.31
PCDHB5-201ENST00000231134 CADPSQ9ULU8 1353 aa17■□□□□ 0.31
PCDHB5-201ENST00000231134 PLEKHH2Q8IVE3 1493 aa17■□□□□ 0.31
PCDHB5-201ENST00000231134 NKTRP30414 1462 aaKnown RBP16.99■□□□□ 0.31
PCDHB5-201ENST00000231134 RAB3GAP1Q15042 981 aa16.99■□□□□ 0.31
PCDHB5-201ENST00000231134 POLR1AO95602 1720 aaPredicted RBP16.99■□□□□ 0.31
PCDHB5-201ENST00000231134 ZBTB22O15209 634 aa16.98■□□□□ 0.31
PCDHB5-201ENST00000231134 ZKSCAN5Q9Y2L8 839 aa16.98■□□□□ 0.31
PCDHB5-201ENST00000231134 PRIM1P49642 420 aaKnown RBP16.98■□□□□ 0.31
PCDHB5-201ENST00000231134 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
PCDHB5-201ENST00000231134 GRIN2BQ13224 1484 aa16.97■□□□□ 0.31
PCDHB5-201ENST00000231134 ZNF521Q96K83 1311 aa16.97■□□□□ 0.31
PCDHB5-201ENST00000231134 ZNF771Q7L3S4 317 aaPredicted RBP16.96■□□□□ 0.31
PCDHB5-201ENST00000231134 LNPKQ9C0E8 428 aa16.96■□□□□ 0.31
PCDHB5-201ENST00000231134 PTMSP20962 102 aa16.96■□□□□ 0.31
PCDHB5-201ENST00000231134 CD2BP2O95400 341 aaKnown RBP16.96■□□□□ 0.31
PCDHB5-201ENST00000231134 BAG4O95429 457 aaKnown RBP16.96■□□□□ 0.31
PCDHB5-201ENST00000231134 SENP3Q9H4L4 574 aaPredicted RBP16.96■□□□□ 0.31
PCDHB5-201ENST00000231134 ZSCAN23Q3MJ62 389 aa16.95■□□□□ 0.3
PCDHB5-201ENST00000231134 GCC2Q8IWJ2 1684 aa16.95■□□□□ 0.3
PCDHB5-201ENST00000231134 PRPF40AO75400 957 aaKnown RBP16.95■□□□□ 0.3
PCDHB5-201ENST00000231134 TSPY4P0CV99 314 aa16.95■□□□□ 0.3
PCDHB5-201ENST00000231134 TSPY10P0CW01 314 aa16.95■□□□□ 0.3
PCDHB5-201ENST00000231134 PLCB2Q00722 1185 aa16.95■□□□□ 0.3
PCDHB5-201ENST00000231134 ZNF830Q96NB3 372 aaPredicted RBP16.95■□□□□ 0.3
PCDHB5-201ENST00000231134 PZPP20742 1482 aa16.95■□□□□ 0.3
PCDHB5-201ENST00000231134 RALGAPBQ86X10 1494 aa16.95■□□□□ 0.3
PCDHB5-201ENST00000231134 ZNF500O60304 480 aaPredicted RBP16.95■□□□□ 0.3
PCDHB5-201ENST00000231134 KLHL40Q2TBA0 621 aa16.95■□□□□ 0.3
PCDHB5-201ENST00000231134 ITPRIPQ8IWB1 547 aa16.94■□□□□ 0.3
PCDHB5-201ENST00000231134 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.94■□□□□ 0.3
PCDHB5-201ENST00000231134 CIZ1Q9ULV3 898 aaPredicted RBP16.94■□□□□ 0.3
PCDHB5-201ENST00000231134 UTP14CQ5TAP6 766 aaKnown RBP16.93■□□□□ 0.3
PCDHB5-201ENST00000231134 GAS2L2Q8NHY3 880 aa16.93■□□□□ 0.3
PCDHB5-201ENST00000231134 SYCE3A1L190 88 aa16.93■□□□□ 0.3
PCDHB5-201ENST00000231134 SMC5Q8IY18 1101 aa16.93■□□□□ 0.3
PCDHB5-201ENST00000231134 CHAMP1Q96JM3 812 aa16.93■□□□□ 0.3
PCDHB5-201ENST00000231134 HNRNPMP52272 730 aaKnown RBP eCLIP16.92■□□□□ 0.3
PCDHB5-201ENST00000231134 C17orf53Q8N3J3 647 aaPredicted RBP16.92■□□□□ 0.3
PCDHB5-201ENST00000231134 CCDC39Q9UFE4 941 aa16.92■□□□□ 0.3
PCDHB5-201ENST00000231134 RARSP54136 660 aaKnown RBP16.92■□□□□ 0.3
PCDHB5-201ENST00000231134 FOXD4L6Q3SYB3 417 aaPredicted RBP16.92■□□□□ 0.3
PCDHB5-201ENST00000231134 FOXD4L3Q6VB84 417 aaPredicted RBP16.92■□□□□ 0.3
PCDHB5-201ENST00000231134 MBD5Q9P267 1494 aa16.91■□□□□ 0.3
PCDHB5-201ENST00000231134 FBLN2P98095 1184 aa16.91■□□□□ 0.3
PCDHB5-201ENST00000231134 KIAA2012Q0VF49 1180 aa16.91■□□□□ 0.3
PCDHB5-201ENST00000231134 ATP2B3Q16720 1220 aa16.91■□□□□ 0.3
PCDHB5-201ENST00000231134 K7ELQ4 463 aaPredicted RBP16.91■□□□□ 0.3
PCDHB5-201ENST00000231134 TCOF1Q13428 1488 aaKnown RBP16.9■□□□□ 0.3
PCDHB5-201ENST00000231134 FANCD2Q9BXW9 1451 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms