RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 STRCQ7RTU9 1775 aa23.1■■□□□ 1.29
GAPDH-201ENST00000229239 MROH1Q8NDA8 1641 aa23.09■■□□□ 1.29
GAPDH-201ENST00000229239 RNF17Q9BXT8 1623 aaKnown RBP23.09■■□□□ 1.29
GAPDH-201ENST00000229239 LMTK2Q8IWU2 1503 aa23.08■■□□□ 1.29
GAPDH-201ENST00000229239 HNRNPUQ00839 825 aaKnown RBP eCLIP23.08■■□□□ 1.29
GAPDH-201ENST00000229239 MRS2Q9HD23 443 aa23.08■■□□□ 1.29
GAPDH-201ENST00000229239 CLTCL1P53675 1640 aa23.05■■□□□ 1.28
GAPDH-201ENST00000229239 NEFLP07196 543 aa23.03■■□□□ 1.28
GAPDH-201ENST00000229239 NBPF1Q3BBV0 1214 aa23.03■■□□□ 1.28
GAPDH-201ENST00000229239 EFCAB6Q5THR3 1501 aa23.03■■□□□ 1.28
GAPDH-201ENST00000229239 CCDC184Q52MB2 194 aa23.02■■□□□ 1.28
GAPDH-201ENST00000229239 POLR3GLQ9BT43 218 aa23.02■■□□□ 1.28
GAPDH-201ENST00000229239 ZNF142P52746 1687 aaPredicted RBP23.02■■□□□ 1.28
GAPDH-201ENST00000229239 MYO3AQ8NEV4 1616 aa23.02■■□□□ 1.28
GAPDH-201ENST00000229239 FBXO31Q5XUX0 539 aaPredicted RBP23.02■■□□□ 1.28
GAPDH-201ENST00000229239 ILDR1Q86SU0 546 aaPredicted RBP23.02■■□□□ 1.28
GAPDH-201ENST00000229239 RALBP1Q15311 655 aa22.98■■□□□ 1.27
GAPDH-201ENST00000229239 ZBED9Q6R2W3 1325 aa22.97■■□□□ 1.27
GAPDH-201ENST00000229239 KIAA1210Q9ULL0 1709 aa22.97■■□□□ 1.27
GAPDH-201ENST00000229239 ABCC3O15438 1527 aa22.97■■□□□ 1.27
GAPDH-201ENST00000229239 TESK2Q96S53 571 aa22.96■■□□□ 1.27
GAPDH-201ENST00000229239 CEP170BQ9Y4F5 1589 aaPredicted RBP22.96■■□□□ 1.27
GAPDH-201ENST00000229239 ZC3H13Q5T200 1668 aaKnown RBP22.96■■□□□ 1.27
GAPDH-201ENST00000229239 TNRQ92752 1358 aa22.95■■□□□ 1.26
GAPDH-201ENST00000229239 MYOM2P54296 1465 aa22.95■■□□□ 1.26
GAPDH-201ENST00000229239 TMF1P82094 1093 aa22.94■■□□□ 1.26
GAPDH-201ENST00000229239 FAM9BQ8IZU0 186 aa22.94■■□□□ 1.26
GAPDH-201ENST00000229239 DMRT2Q9Y5R5 561 aa22.94■■□□□ 1.26
GAPDH-201ENST00000229239 CAMSAP1Q5T5Y3 1602 aa22.94■■□□□ 1.26
GAPDH-201ENST00000229239 IQGAP1P46940 1657 aa22.94■■□□□ 1.26
GAPDH-201ENST00000229239 FKBP8Q14318 412 aa22.92■■□□□ 1.26
GAPDH-201ENST00000229239 SCAF11Q99590 1463 aaKnown RBP22.92■■□□□ 1.26
GAPDH-201ENST00000229239 BRD4O60885 1362 aaPredicted RBP22.91■■□□□ 1.26
GAPDH-201ENST00000229239 SLC24A1O60721 1099 aa22.91■■□□□ 1.26
GAPDH-201ENST00000229239 MYBBP1AQ9BQG0 1328 aaKnown RBP22.91■■□□□ 1.26
GAPDH-201ENST00000229239 A2ML1A8K2U0 1454 aa22.9■■□□□ 1.26
GAPDH-201ENST00000229239 KIF1BO60333 1816 aa22.9■■□□□ 1.26
GAPDH-201ENST00000229239 DISP3Q9P2K9 1392 aa22.88■■□□□ 1.25
GAPDH-201ENST00000229239 EIF3AQ14152 1382 aaKnown RBP22.88■■□□□ 1.25
GAPDH-201ENST00000229239 PARD3Q8TEW0 1356 aa22.86■■□□□ 1.25
GAPDH-201ENST00000229239 CDCA8Q53HL2 280 aa22.86■■□□□ 1.25
GAPDH-201ENST00000229239 ARHGAP31Q2M1Z3 1444 aa22.86■■□□□ 1.25
GAPDH-201ENST00000229239 ERICH6BQ5W0A0 696 aa22.85■■□□□ 1.25
GAPDH-201ENST00000229239 IFT172Q9UG01 1749 aa22.85■■□□□ 1.25
GAPDH-201ENST00000229239 PER1O15534 1290 aaPredicted RBP22.85■■□□□ 1.25
GAPDH-201ENST00000229239 TMC1Q8TDI8 760 aa22.85■■□□□ 1.25
GAPDH-201ENST00000229239 FBXO41Q8TF61 875 aa22.85■■□□□ 1.25
GAPDH-201ENST00000229239 SPATA31D1Q6ZQQ2 1576 aa22.84■■□□□ 1.25
GAPDH-201ENST00000229239 ADGRB3O60242 1522 aa22.84■■□□□ 1.25
GAPDH-201ENST00000229239 NLRP1Q9C000 1473 aa22.84■■□□□ 1.25
GAPDH-201ENST00000229239 NRXN1Q9ULB1 1477 aa22.84■■□□□ 1.25
GAPDH-201ENST00000229239 PNISRQ8TF01 805 aaKnown RBP22.84■■□□□ 1.25
GAPDH-201ENST00000229239 ERVK-7P63135 1459 aa22.84■■□□□ 1.25
GAPDH-201ENST00000229239 CFAP65Q6ZU64 1925 aaKnown RBP22.83■■□□□ 1.25
GAPDH-201ENST00000229239 NCKAP5LQ9HCH0 1330 aa22.83■■□□□ 1.25
GAPDH-201ENST00000229239 THEMISQ8N1K5 641 aaPredicted RBP22.81■■□□□ 1.24
GAPDH-201ENST00000229239 LRPPRCP42704 1394 aaKnown RBP22.81■■□□□ 1.24
GAPDH-201ENST00000229239 UGGT1Q9NYU2 1555 aa22.81■■□□□ 1.24
GAPDH-201ENST00000229239 NLRP13Q86W25 1043 aa22.81■■□□□ 1.24
GAPDH-201ENST00000229239 CERKQ8TCT0 537 aa22.81■■□□□ 1.24
GAPDH-201ENST00000229239 LTBP4Q8N2S1 1624 aa22.78■■□□□ 1.24
GAPDH-201ENST00000229239 RPGRIP1LQ68CZ1 1315 aa22.77■■□□□ 1.24
GAPDH-201ENST00000229239 INSRP06213 1382 aa22.77■■□□□ 1.24
GAPDH-201ENST00000229239 SYNMO15061 1565 aa22.77■■□□□ 1.24
GAPDH-201ENST00000229239 SETBP1Q9Y6X0 1596 aa22.76■■□□□ 1.23
GAPDH-201ENST00000229239 NOS1P29475 1434 aa22.75■■□□□ 1.23
GAPDH-201ENST00000229239 SMG6Q86US8 1419 aaKnown RBP22.75■■□□□ 1.23
GAPDH-201ENST00000229239 PANK3Q9H999 370 aa22.75■■□□□ 1.23
GAPDH-201ENST00000229239 ANKLE2Q86XL3 938 aa22.74■■□□□ 1.23
GAPDH-201ENST00000229239 CNGB1Q14028 1251 aaPredicted RBP22.72■■□□□ 1.23
GAPDH-201ENST00000229239 ADGRF5Q8IZF2 1346 aa22.72■■□□□ 1.23
GAPDH-201ENST00000229239 SBNO2Q9Y2G9 1366 aa22.71■■□□□ 1.23
GAPDH-201ENST00000229239 PPLO60437 1756 aa22.7■■□□□ 1.22
GAPDH-201ENST00000229239 PIK3C2BO00750 1634 aa22.7■■□□□ 1.22
GAPDH-201ENST00000229239 UBR1Q8IWV7 1749 aa22.7■■□□□ 1.22
GAPDH-201ENST00000229239 IDI1Q13907 227 aa22.69■■□□□ 1.22
GAPDH-201ENST00000229239 CFAP70Q5T0N1 1121 aa22.69■■□□□ 1.22
GAPDH-201ENST00000229239 BCANQ96GW7 911 aa22.69■■□□□ 1.22
GAPDH-201ENST00000229239 PIK3C2GO75747 1445 aa22.68■■□□□ 1.22
GAPDH-201ENST00000229239 NPC1L1Q9UHC9 1359 aa22.68■■□□□ 1.22
GAPDH-201ENST00000229239 KDM5AP29375 1690 aaKnown RBP22.68■■□□□ 1.22
GAPDH-201ENST00000229239 STAG3Q9UJ98 1225 aa22.67■■□□□ 1.22
GAPDH-201ENST00000229239 SLC52A1Q9NWF4 448 aa22.66■■□□□ 1.22
GAPDH-201ENST00000229239 NUDCQ9Y266 331 aa22.66■■□□□ 1.22
GAPDH-201ENST00000229239 MED14O60244 1454 aa22.65■■□□□ 1.22
GAPDH-201ENST00000229239 ZNF335Q9H4Z2 1342 aaPredicted RBP22.65■■□□□ 1.22
GAPDH-201ENST00000229239 KNSTRNQ9Y448 316 aa22.64■■□□□ 1.22
GAPDH-201ENST00000229239 C14orf93Q9H972 538 aaKnown RBP22.64■■□□□ 1.21
GAPDH-201ENST00000229239 IQSEC2Q5JU85 1478 aa22.64■■□□□ 1.21
GAPDH-201ENST00000229239 MYOM1P52179 1685 aa22.63■■□□□ 1.21
GAPDH-201ENST00000229239 ASXL1Q8IXJ9 1541 aa22.62■■□□□ 1.21
GAPDH-201ENST00000229239 CHGAP10645 457 aaKnown RBP22.62■■□□□ 1.21
GAPDH-201ENST00000229239 CC2D1BQ5T0F9 858 aaKnown RBP22.62■■□□□ 1.21
GAPDH-201ENST00000229239 TXNDC2Q86VQ3 553 aa22.6■■□□□ 1.21
GAPDH-201ENST00000229239 NPHP4O75161 1426 aaPredicted RBP22.6■■□□□ 1.21
GAPDH-201ENST00000229239 ARHGAP23Q9P227 1491 aa22.6■■□□□ 1.21
GAPDH-201ENST00000229239 ADGRB1O14514 1584 aa22.6■■□□□ 1.21
GAPDH-201ENST00000229239 EID1Q9Y6B2 187 aa22.6■■□□□ 1.21
GAPDH-201ENST00000229239 ZFYVE9O95405 1425 aa22.59■■□□□ 1.21
GAPDH-201ENST00000229239 LTKP29376 864 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms