RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 KIF13AQ9H1H9 1805 aa23.28■■□□□ 1.32
CDKN1B-201ENST00000228872 SKAP1Q86WV1 359 aa23.28■■□□□ 1.32
CDKN1B-201ENST00000228872 FAM69CQ0P6D2 419 aa23.26■■□□□ 1.31
CDKN1B-201ENST00000228872 SLC4A3P48751 1232 aa23.24■■□□□ 1.31
CDKN1B-201ENST00000228872 VWDEQ8N2E2 1590 aa23.24■■□□□ 1.31
CDKN1B-201ENST00000228872 TSPOAP1O95153 1857 aa23.24■■□□□ 1.31
CDKN1B-201ENST00000228872 ABCA6Q8N139 1617 aa23.24■■□□□ 1.31
CDKN1B-201ENST00000228872 PRDM15P57071 1507 aaPredicted RBP23.23■■□□□ 1.31
CDKN1B-201ENST00000228872 CRBNQ96SW2 442 aa23.23■■□□□ 1.31
CDKN1B-201ENST00000228872 PLIN1O60240 522 aa23.22■■□□□ 1.31
CDKN1B-201ENST00000228872 RALGAPBQ86X10 1494 aa23.22■■□□□ 1.31
CDKN1B-201ENST00000228872 EIF5BO60841 1220 aaKnown RBP23.22■■□□□ 1.31
CDKN1B-201ENST00000228872 CDCA7LQ96GN5 454 aa23.22■■□□□ 1.31
CDKN1B-201ENST00000228872 A2MP01023 1474 aa23.22■■□□□ 1.31
CDKN1B-201ENST00000228872 MROH1Q8NDA8 1641 aa23.22■■□□□ 1.31
CDKN1B-201ENST00000228872 RNF17Q9BXT8 1623 aaKnown RBP23.21■■□□□ 1.31
CDKN1B-201ENST00000228872 FRMPD1Q5SYB0 1578 aa23.21■■□□□ 1.31
CDKN1B-201ENST00000228872 UHRF1BP1Q6BDS2 1440 aa23.2■■□□□ 1.31
CDKN1B-201ENST00000228872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.2■■□□□ 1.34e-7■□□□□ 10.4
CDKN1B-201ENST00000228872 TET3O43151 1660 aa23.2■■□□□ 1.3
CDKN1B-201ENST00000228872 DAXXQ9UER7 740 aaPredicted RBP23.19■■□□□ 1.3
CDKN1B-201ENST00000228872 ATP10AO60312 1499 aa23.19■■□□□ 1.3
CDKN1B-201ENST00000228872 E9PCH4 1651 aa23.18■■□□□ 1.3
CDKN1B-201ENST00000228872 ZMYM4Q5VZL5 1548 aa23.18■■□□□ 1.3
CDKN1B-201ENST00000228872 NLRP13Q86W25 1043 aa23.18■■□□□ 1.3
CDKN1B-201ENST00000228872 CARD11Q9BXL7 1154 aa23.18■■□□□ 1.3
CDKN1B-201ENST00000228872 DIP2CQ9Y2E4 1556 aa23.17■■□□□ 1.3
CDKN1B-201ENST00000228872 RAPGEF3O95398 923 aa23.15■■□□□ 1.3
CDKN1B-201ENST00000228872 PLA2R1Q13018 1463 aa23.14■■□□□ 1.3
CDKN1B-201ENST00000228872 KANK1Q14678 1352 aa23.14■■□□□ 1.3
CDKN1B-201ENST00000228872 KDM2BQ8NHM5 1336 aa23.14■■□□□ 1.29
CDKN1B-201ENST00000228872 PARD3Q8TEW0 1356 aa23.14■■□□□ 1.29
CDKN1B-201ENST00000228872 ST20-MTHFSA0A0A6YYL1 179 aa23.14■■□□□ 1.29
CDKN1B-201ENST00000228872 FAM43AQ8N2R8 423 aa23.13■■□□□ 1.29
CDKN1B-201ENST00000228872 KIF3BO15066 747 aa23.13■■□□□ 1.29
CDKN1B-201ENST00000228872 RSPH6AQ9H0K4 717 aa23.12■■□□□ 1.29
CDKN1B-201ENST00000228872 SPHKAPQ2M3C7 1700 aa23.11■■□□□ 1.29
CDKN1B-201ENST00000228872 LMTK2Q8IWU2 1503 aa23.11■■□□□ 1.29
CDKN1B-201ENST00000228872 FRAT2O75474 233 aaPredicted RBP23.11■■□□□ 1.29
CDKN1B-201ENST00000228872 CCDC144AA2RUR9 1427 aa23.11■■□□□ 1.29
CDKN1B-201ENST00000228872 FAM161AQ3B820 660 aa23.1■■□□□ 1.29
CDKN1B-201ENST00000228872 C8orf34Q49A92 452 aa23.09■■□□□ 1.29
CDKN1B-201ENST00000228872 CENPQQ7L2Z9 268 aaPredicted RBP23.08■■□□□ 1.29
CDKN1B-201ENST00000228872 CEP152O94986 1710 aa23.08■■□□□ 1.28
CDKN1B-201ENST00000228872 C20orf194Q5TEA3 1177 aa23.07■■□□□ 1.28
CDKN1B-201ENST00000228872 TRPM2O94759 1503 aa23.07■■□□□ 1.28
CDKN1B-201ENST00000228872 BLMP54132 1417 aaPredicted RBP23.07■■□□□ 1.28
CDKN1B-201ENST00000228872 INSRP06213 1382 aa23.07■■□□□ 1.28
CDKN1B-201ENST00000228872 DCAF11Q8TEB1 546 aa23.06■■□□□ 1.28
CDKN1B-201ENST00000228872 EFCAB6Q5THR3 1501 aa23.06■■□□□ 1.28
CDKN1B-201ENST00000228872 PTPRTO14522 1441 aa23.06■■□□□ 1.28
CDKN1B-201ENST00000228872 YEATS2Q9ULM3 1422 aa23.04■■□□□ 1.28
CDKN1B-201ENST00000228872 REREQ9P2R6 1566 aa23.03■■□□□ 1.28
CDKN1B-201ENST00000228872 KDM2AQ9Y2K7 1162 aa23.03■■□□□ 1.28
CDKN1B-201ENST00000228872 ZC3H13Q5T200 1668 aaKnown RBP23■■□□□ 1.27
CDKN1B-201ENST00000228872 PER1O15534 1290 aaPredicted RBP22.99■■□□□ 1.27
CDKN1B-201ENST00000228872 CLTCL1P53675 1640 aa22.98■■□□□ 1.27
CDKN1B-201ENST00000228872 ABCC3O15438 1527 aa22.97■■□□□ 1.27
CDKN1B-201ENST00000228872 NEURL4Q96JN8 1562 aa22.97■■□□□ 1.27
CDKN1B-201ENST00000228872 CAMSAP1Q5T5Y3 1602 aa22.96■■□□□ 1.27
CDKN1B-201ENST00000228872 TRPM1Q7Z4N2 1603 aa22.94■■□□□ 1.26
CDKN1B-201ENST00000228872 COL17A1Q9UMD9 1497 aaPredicted RBP22.94■■□□□ 1.26
CDKN1B-201ENST00000228872 AGLP35573 1532 aa22.93■■□□□ 1.26
CDKN1B-201ENST00000228872 RGL3Q3MIN7 710 aa22.93■■□□□ 1.26
CDKN1B-201ENST00000228872 ARHGEF40Q8TER5 1519 aa22.92■■□□□ 1.26
CDKN1B-201ENST00000228872 CC2D1BQ5T0F9 858 aaKnown RBP22.92■■□□□ 1.26
CDKN1B-201ENST00000228872 PRAG1Q86YV5 1406 aa22.91■■□□□ 1.26
CDKN1B-201ENST00000228872 RGS3P49796 1198 aa22.91■■□□□ 1.26
CDKN1B-201ENST00000228872 GGT6Q6P531 493 aa22.91■■□□□ 1.26
CDKN1B-201ENST00000228872 KIF1BO60333 1816 aa22.9■■□□□ 1.26
CDKN1B-201ENST00000228872 POGKQ9P215 609 aa22.9■■□□□ 1.26
CDKN1B-201ENST00000228872 NPATQ14207 1427 aa22.89■■□□□ 1.25
CDKN1B-201ENST00000228872 DUSP27Q5VZP5 1158 aa22.88■■□□□ 1.25
CDKN1B-201ENST00000228872 RRAGDQ9NQL2 400 aaPredicted RBP22.88■■□□□ 1.25
CDKN1B-201ENST00000228872 ARHGAP31Q2M1Z3 1444 aa22.87■■□□□ 1.25
CDKN1B-201ENST00000228872 SIGLEC1Q9BZZ2 1709 aa22.86■■□□□ 1.25
CDKN1B-201ENST00000228872 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.85■■□□□ 1.25
CDKN1B-201ENST00000228872 PLEKHH1Q9ULM0 1364 aa22.85■■□□□ 1.25
CDKN1B-201ENST00000228872 USP19O94966 1318 aa22.85■■□□□ 1.25
CDKN1B-201ENST00000228872 ADAMTS8Q9UP79 889 aa22.84■■□□□ 1.25
CDKN1B-201ENST00000228872 LAMC1P11047 1609 aa22.83■■□□□ 1.25
CDKN1B-201ENST00000228872 UGGT1Q9NYU2 1555 aa22.83■■□□□ 1.25
CDKN1B-201ENST00000228872 CFAP65Q6ZU64 1925 aaKnown RBP22.82■■□□□ 1.24
CDKN1B-201ENST00000228872 IFT172Q9UG01 1749 aa22.82■■□□□ 1.24
CDKN1B-201ENST00000228872 L1TD1Q5T7N2 865 aaKnown RBP22.82■■□□□ 1.24
CDKN1B-201ENST00000228872 PANK3Q9H999 370 aa22.82■■□□□ 1.24
CDKN1B-201ENST00000228872 STAC3Q96MF2 364 aa22.81■■□□□ 1.24
CDKN1B-201ENST00000228872 NOS1P29475 1434 aa22.81■■□□□ 1.24
CDKN1B-201ENST00000228872 MROH2AA6NES4 1674 aa22.81■■□□□ 1.24
CDKN1B-201ENST00000228872 PIK3C2BO00750 1634 aa22.81■■□□□ 1.24
CDKN1B-201ENST00000228872 MADDQ8WXG6 1647 aa22.81■■□□□ 1.24
CDKN1B-201ENST00000228872 DISP3Q9P2K9 1392 aa22.8■■□□□ 1.24
CDKN1B-201ENST00000228872 ZNF521Q96K83 1311 aa22.8■■□□□ 1.24
CDKN1B-201ENST00000228872 ADGRB3O60242 1522 aa22.79■■□□□ 1.24
CDKN1B-201ENST00000228872 NBPF1Q3BBV0 1214 aa22.79■■□□□ 1.24
CDKN1B-201ENST00000228872 PPP6R1Q9UPN7 881 aa22.79■■□□□ 1.24
CDKN1B-201ENST00000228872 EIF3AQ14152 1382 aaKnown RBP22.78■■□□□ 1.24
CDKN1B-201ENST00000228872 GPRASP1Q5JY77 1395 aa22.77■■□□□ 1.24
CDKN1B-201ENST00000228872 GOLGA2Q08379 1002 aa22.77■■□□□ 1.24
CDKN1B-201ENST00000228872 SYNMO15061 1565 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms