RNA–Protein interactions for RNA: ENST00000225844.6

CCL13-201, Transcript of C-C motif chemokine ligand 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL13, Length 851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-201ENST00000225844 DEPDC5O75140 1603 aa11.36□□□□□ -0.59
CCL13-201ENST00000225844 IQGAP1P46940 1657 aa11.36□□□□□ -0.59
CCL13-201ENST00000225844 ANKRD50Q9ULJ7 1429 aa11.35□□□□□ -0.59
CCL13-201ENST00000225844 TXNDC2Q86VQ3 553 aa11.34□□□□□ -0.59
CCL13-201ENST00000225844 NAIPQ13075 1403 aa11.34□□□□□ -0.59
CCL13-201ENST00000225844 SYNMO15061 1565 aa11.33□□□□□ -0.6
CCL13-201ENST00000225844 EIF2AK4Q9P2K8 1649 aaKnown RBP11.32□□□□□ -0.6
CCL13-201ENST00000225844 EID1Q9Y6B2 187 aa11.32□□□□□ -0.6
CCL13-201ENST00000225844 SETD5Q9C0A6 1442 aa11.32□□□□□ -0.6
CCL13-201ENST00000225844 SCAF11Q99590 1463 aaKnown RBP11.32□□□□□ -0.6
CCL13-201ENST00000225844 LTKP29376 864 aa11.31□□□□□ -0.6
CCL13-201ENST00000225844 ERVK-7P63135 1459 aa11.31□□□□□ -0.6
CCL13-201ENST00000225844 STRCP1A6NGW2 1772 aa11.31□□□□□ -0.6
CCL13-201ENST00000225844 KANK1Q14678 1352 aa11.3□□□□□ -0.6
CCL13-201ENST00000225844 FAM135BQ49AJ0 1406 aa11.3□□□□□ -0.6
CCL13-201ENST00000225844 STAG3Q9UJ98 1225 aa11.29□□□□□ -0.6
CCL13-201ENST00000225844 ABCC3O15438 1527 aa11.29□□□□□ -0.6
CCL13-201ENST00000225844 TMEM94Q12767 1356 aa11.28□□□□□ -0.6
CCL13-201ENST00000225844 PROSER2Q86WR7 435 aaPredicted RBP11.28□□□□□ -0.6
CCL13-201ENST00000225844 RBM33Q96EV2 1170 aaKnown RBP11.28□□□□□ -0.6
CCL13-201ENST00000225844 MKRN4PQ13434 485 aaPredicted RBP11.27□□□□□ -0.61
CCL13-201ENST00000225844 GCC2Q8IWJ2 1684 aa11.26□□□□□ -0.61
CCL13-201ENST00000225844 BCANQ96GW7 911 aa11.25□□□□□ -0.61
CCL13-201ENST00000225844 ZC3H13Q5T200 1668 aaKnown RBP11.24□□□□□ -0.61
CCL13-201ENST00000225844 KCNA6P17658 529 aa11.24□□□□□ -0.61
CCL13-201ENST00000225844 MEX3CQ5U5Q3 659 aaKnown RBP11.24□□□□□ -0.61
CCL13-201ENST00000225844 TRIM52Q96A61 297 aa11.24□□□□□ -0.61
CCL13-201ENST00000225844 SLC26A8Q96RN1 970 aa11.24□□□□□ -0.61
CCL13-201ENST00000225844 NUP155O75694 1391 aa11.24□□□□□ -0.61
CCL13-201ENST00000225844 RAB3GAP2Q9H2M9 1393 aa11.24□□□□□ -0.61
CCL13-201ENST00000225844 ARHGAP23Q9P227 1491 aa11.24□□□□□ -0.61
CCL13-201ENST00000225844 PRDM15P57071 1507 aaPredicted RBP11.24□□□□□ -0.61
CCL13-201ENST00000225844 LMTK2Q8IWU2 1503 aa11.24□□□□□ -0.61
CCL13-201ENST00000225844 PCGF6Q9BYE7 350 aa11.23□□□□□ -0.61
CCL13-201ENST00000225844 JCADQ9P266 1359 aa11.23□□□□□ -0.61
CCL13-201ENST00000225844 TMEM2Q9UHN6 1383 aa11.23□□□□□ -0.61
CCL13-201ENST00000225844 ARHGAP31Q2M1Z3 1444 aa11.23□□□□□ -0.61
CCL13-201ENST00000225844 SLIT1O75093 1534 aa11.23□□□□□ -0.61
CCL13-201ENST00000225844 UNC13BO14795 1591 aa11.22□□□□□ -0.61
CCL13-201ENST00000225844 MSH6P52701 1360 aa11.22□□□□□ -0.61
CCL13-201ENST00000225844 SRCAPQ6ZRS2 3230 aa11.22□□□□□ -0.61
CCL13-201ENST00000225844 UPF1Q92900 1129 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCL13-201ENST00000225844 SLAIN2Q9P270 581 aa11.22□□□□□ -0.61
CCL13-201ENST00000225844 SETD1AO15047 1707 aaKnown RBP11.21□□□□□ -0.61
CCL13-201ENST00000225844 UBR1Q8IWV7 1749 aa11.21□□□□□ -0.61
CCL13-201ENST00000225844 RPRD2Q5VT52 1461 aaKnown RBP11.21□□□□□ -0.61
CCL13-201ENST00000225844 ROBO1Q9Y6N7 1651 aa11.2□□□□□ -0.62
CCL13-201ENST00000225844 ZNF772Q68DY9 489 aaPredicted RBP11.2□□□□□ -0.62
CCL13-201ENST00000225844 MPHOSPH9Q99550 1183 aa11.19□□□□□ -0.62
CCL13-201ENST00000225844 IQGAP3Q86VI3 1631 aa11.18□□□□□ -0.62
CCL13-201ENST00000225844 MROH1Q8NDA8 1641 aa11.18□□□□□ -0.62
CCL13-201ENST00000225844 IDI1Q13907 227 aa11.18□□□□□ -0.62
CCL13-201ENST00000225844 C14orf37Q86TY3 774 aa11.18□□□□□ -0.62
CCL13-201ENST00000225844 XIRP1Q702N8 1843 aaKnown RBP11.17□□□□□ -0.62
CCL13-201ENST00000225844 SPATA31A6Q5VVP1 1343 aa11.16□□□□□ -0.62
CCL13-201ENST00000225844 EFCAB6Q5THR3 1501 aa11.16□□□□□ -0.62
CCL13-201ENST00000225844 CEP152O94986 1710 aa11.16□□□□□ -0.62
CCL13-201ENST00000225844 RXRBP28702 533 aa11.16□□□□□ -0.62
CCL13-201ENST00000225844 SLC52A1Q9NWF4 448 aa11.16□□□□□ -0.62
CCL13-201ENST00000225844 ZBTB12Q9Y330 459 aaPredicted RBP11.16□□□□□ -0.62
CCL13-201ENST00000225844 CLSPNQ9HAW4 1339 aa11.15□□□□□ -0.62
CCL13-201ENST00000225844 NKTRP30414 1462 aaKnown RBP11.15□□□□□ -0.62
CCL13-201ENST00000225844 PPP1R15AO75807 674 aaPredicted RBP11.15□□□□□ -0.62
CCL13-201ENST00000225844 PIK3C2BO00750 1634 aa11.15□□□□□ -0.62
CCL13-201ENST00000225844 TET3O43151 1660 aa11.14□□□□□ -0.63
CCL13-201ENST00000225844 LRP6O75581 1613 aa11.14□□□□□ -0.63
CCL13-201ENST00000225844 NUTM2BA6NNL0 878 aaPredicted RBP11.14□□□□□ -0.63
CCL13-201ENST00000225844 NUTM2EB1AL46 878 aaPredicted RBP11.14□□□□□ -0.63
CCL13-201ENST00000225844 NUTM2AQ8IVF1 878 aaPredicted RBP11.14□□□□□ -0.63
CCL13-201ENST00000225844 PHLPP1O60346 1717 aa11.14□□□□□ -0.63
CCL13-201ENST00000225844 CFAP65Q6ZU64 1925 aaKnown RBP11.13□□□□□ -0.63
CCL13-201ENST00000225844 NOS1P29475 1434 aa11.12□□□□□ -0.63
CCL13-201ENST00000225844 ATF3P18847 181 aa11.11□□□□□ -0.63
CCL13-201ENST00000225844 CADPS2Q86UW7 1296 aa11.1□□□□□ -0.63
CCL13-201ENST00000225844 STAC3Q96MF2 364 aa11.1□□□□□ -0.63
CCL13-201ENST00000225844 NWD1Q149M9 1564 aa11.1□□□□□ -0.63
CCL13-201ENST00000225844 HDGFP51858 240 aaKnown RBP11.09□□□□□ -0.63
CCL13-201ENST00000225844 COL16A1Q07092 1604 aaPredicted RBP11.09□□□□□ -0.63
CCL13-201ENST00000225844 ADGRB3O60242 1522 aa11.09□□□□□ -0.63
CCL13-201ENST00000225844 AFF2P51816 1311 aa11.09□□□□□ -0.63
CCL13-201ENST00000225844 DHX57Q6P158 1386 aaKnown RBP11.08□□□□□ -0.64
CCL13-201ENST00000225844 PLEKHG1Q9ULL1 1385 aa11.08□□□□□ -0.64
CCL13-201ENST00000225844 CHGAP10645 457 aaKnown RBP11.08□□□□□ -0.64
CCL13-201ENST00000225844 NUTM2DQ5VT03 806 aaPredicted RBP11.08□□□□□ -0.64
CCL13-201ENST00000225844 C19orf44Q9H6X5 657 aa11.08□□□□□ -0.64
CCL13-201ENST00000225844 ANKRD30BQ9BXX2 1392 aa11.07□□□□□ -0.64
CCL13-201ENST00000225844 C8orf37Q96NL8 207 aa11.07□□□□□ -0.64
CCL13-201ENST00000225844 BRINP3Q76B58 766 aa11.06□□□□□ -0.64
CCL13-201ENST00000225844 TIMELESSQ9UNS1 1208 aa11.06□□□□□ -0.64
CCL13-201ENST00000225844 TBX22Q9Y458 520 aa11.06□□□□□ -0.64
CCL13-201ENST00000225844 RIMS2Q9UQ26 1411 aa11.06□□□□□ -0.64
CCL13-201ENST00000225844 CDK12Q9NYV4 1490 aaPredicted RBP11.06□□□□□ -0.64
CCL13-201ENST00000225844 TRPM2O94759 1503 aa11.05□□□□□ -0.64
CCL13-201ENST00000225844 E9PCH4 1651 aa11.05□□□□□ -0.64
CCL13-201ENST00000225844 CCDC144AA2RUR9 1427 aa11.05□□□□□ -0.64
CCL13-201ENST00000225844 QTRT2Q9H974 415 aaKnown RBP11.05□□□□□ -0.64
CCL13-201ENST00000225844 NCOA3Q9Y6Q9 1424 aa11.05□□□□□ -0.64
CCL13-201ENST00000225844 RPGRIP1LQ68CZ1 1315 aa11.05□□□□□ -0.64
CCL13-201ENST00000225844 KDM5AP29375 1690 aaKnown RBP11.04□□□□□ -0.64
CCL13-201ENST00000225844 RBM6P78332 1123 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms