RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 CCDC184Q52MB2 194 aa13.68□□□□□ -0.22
CHERP-201ENST00000198939 CAMSAP1Q5T5Y3 1602 aa13.67□□□□□ -0.22
CHERP-201ENST00000198939 EIF4G2P78344 907 aaKnown RBP eCLIP13.67□□□□□ -0.22
CHERP-201ENST00000198939 ADAMTSL3P82987 1691 aa13.67□□□□□ -0.22
CHERP-201ENST00000198939 NPATQ14207 1427 aa13.67□□□□□ -0.22
CHERP-201ENST00000198939 FER1L4A9Z1Z3 1794 aa13.67□□□□□ -0.22
CHERP-201ENST00000198939 HSPA5P11021 654 aaKnown RBP13.67□□□□□ -0.22
CHERP-201ENST00000198939 CLTCQ00610 1675 aaKnown RBP13.67□□□□□ -0.22
CHERP-201ENST00000198939 STAG3Q9UJ98 1225 aa13.66□□□□□ -0.22
CHERP-201ENST00000198939 SIGLEC1Q9BZZ2 1709 aa13.66□□□□□ -0.22
CHERP-201ENST00000198939 CCDC144AA2RUR9 1427 aa13.66□□□□□ -0.22
CHERP-201ENST00000198939 CEP152O94986 1710 aa13.65□□□□□ -0.22
CHERP-201ENST00000198939 TNRQ92752 1358 aa13.64□□□□□ -0.23
CHERP-201ENST00000198939 PTPRTO14522 1441 aa13.64□□□□□ -0.23
CHERP-201ENST00000198939 ANKRD30BQ9BXX2 1392 aa13.64□□□□□ -0.23
CHERP-201ENST00000198939 HDGFP51858 240 aaKnown RBP13.64□□□□□ -0.23
CHERP-201ENST00000198939 ARXQ96QS3 562 aa13.64□□□□□ -0.23
CHERP-201ENST00000198939 WASHC2AQ641Q2 1341 aa13.64□□□□□ -0.23
CHERP-201ENST00000198939 MADDQ8WXG6 1647 aa13.63□□□□□ -0.23
CHERP-201ENST00000198939 PRKRIP1Q9H875 184 aaPredicted RBP13.63□□□□□ -0.23
CHERP-201ENST00000198939 NOS1P29475 1434 aa13.63□□□□□ -0.23
CHERP-201ENST00000198939 FOXD1Q16676 465 aa13.63□□□□□ -0.23
CHERP-201ENST00000198939 PLPPR3Q6T4P5 718 aa13.63□□□□□ -0.23
CHERP-201ENST00000198939 ERVK-7P63135 1459 aa13.63□□□□□ -0.23
CHERP-201ENST00000198939 STAC3Q96MF2 364 aa13.62□□□□□ -0.23
CHERP-201ENST00000198939 PTPRMP28827 1452 aa13.62□□□□□ -0.23
CHERP-201ENST00000198939 RIMS1Q86UR5 1692 aaKnown RBP13.62□□□□□ -0.23
CHERP-201ENST00000198939 FBXO31Q5XUX0 539 aaPredicted RBP13.61□□□□□ -0.23
CHERP-201ENST00000198939 E9PCH4 1651 aa13.61□□□□□ -0.23
CHERP-201ENST00000198939 CEBPAP49715 358 aaPredicted RBP13.61□□□□□ -0.23
CHERP-201ENST00000198939 BRPF3Q9ULD4 1205 aa13.61□□□□□ -0.23
CHERP-201ENST00000198939 NLRP1Q9C000 1473 aa13.6□□□□□ -0.23
CHERP-201ENST00000198939 TRPM2O94759 1503 aa13.6□□□□□ -0.23
CHERP-201ENST00000198939 SPATA31D1Q6ZQQ2 1576 aa13.6□□□□□ -0.23
CHERP-201ENST00000198939 SENP3-EIF4A1A0A087X0R7 540 aa13.59□□□□□ -0.23
CHERP-201ENST00000198939 CHGAP10645 457 aaKnown RBP13.59□□□□□ -0.23
CHERP-201ENST00000198939 NUDCQ9Y266 331 aa13.59□□□□□ -0.23
CHERP-201ENST00000198939 KDM4FA0A1W2PPD8 638 aa13.59□□□□□ -0.23
CHERP-201ENST00000198939 THEMISQ8N1K5 641 aaPredicted RBP13.59□□□□□ -0.23
CHERP-201ENST00000198939 RPGRIP1LQ68CZ1 1315 aa13.58□□□□□ -0.24
CHERP-201ENST00000198939 GSE1Q14687 1217 aa13.58□□□□□ -0.24
CHERP-201ENST00000198939 PREX1Q8TCU6 1659 aa13.57□□□□□ -0.24
CHERP-201ENST00000198939 SPHKAPQ2M3C7 1700 aa13.57□□□□□ -0.24
CHERP-201ENST00000198939 IDI1Q13907 227 aa13.57□□□□□ -0.24
CHERP-201ENST00000198939 ZNF326Q5BKZ1 582 aaKnown RBP13.57□□□□□ -0.24
CHERP-201ENST00000198939 C11orf95C9JLR9 678 aaPredicted RBP13.56□□□□□ -0.24
CHERP-201ENST00000198939 TCERG1O14776 1098 aaKnown RBP13.56□□□□□ -0.24
CHERP-201ENST00000198939 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.56□□□□□ -0.24
CHERP-201ENST00000198939 C3P01024 1663 aa13.56□□□□□ -0.24
CHERP-201ENST00000198939 UHRF1BP1Q6BDS2 1440 aa13.56□□□□□ -0.24
CHERP-201ENST00000198939 PDE4AP27815 886 aa13.55□□□□□ -0.24
CHERP-201ENST00000198939 DDRGK1Q96HY6 314 aa13.55□□□□□ -0.24
CHERP-201ENST00000198939 PLA2R1Q13018 1463 aa13.55□□□□□ -0.24
CHERP-201ENST00000198939 SETD1BQ9UPS6 1966 aaKnown RBP13.54□□□□□ -0.24
CHERP-201ENST00000198939 EID1Q9Y6B2 187 aa13.54□□□□□ -0.24
CHERP-201ENST00000198939 A2ML1A8K2U0 1454 aa13.53□□□□□ -0.24
CHERP-201ENST00000198939 VGFO15240 615 aaPredicted RBP13.53□□□□□ -0.24
CHERP-201ENST00000198939 NEURL4Q96JN8 1562 aa13.52□□□□□ -0.24
CHERP-201ENST00000198939 AEBP2Q6ZN18 517 aaPredicted RBP13.52□□□□□ -0.24
CHERP-201ENST00000198939 RGL3Q3MIN7 710 aa13.51□□□□□ -0.25
CHERP-201ENST00000198939 SMG6Q86US8 1419 aaKnown RBP13.51□□□□□ -0.25
CHERP-201ENST00000198939 SYNMO15061 1565 aa13.51□□□□□ -0.25
CHERP-201ENST00000198939 RSPH6AQ9H0K4 717 aa13.5□□□□□ -0.25
CHERP-201ENST00000198939 CFAP65Q6ZU64 1925 aaKnown RBP13.5□□□□□ -0.25
CHERP-201ENST00000198939 KIF1BO60333 1816 aa13.49□□□□□ -0.25
CHERP-201ENST00000198939 UGGT1Q9NYU2 1555 aa13.49□□□□□ -0.25
CHERP-201ENST00000198939 PIK3C2BO00750 1634 aa13.49□□□□□ -0.25
CHERP-201ENST00000198939 CLTCL1P53675 1640 aa13.49□□□□□ -0.25
CHERP-201ENST00000198939 TMC1Q8TDI8 760 aa13.49□□□□□ -0.25
CHERP-201ENST00000198939 ADGRB3O60242 1522 aa13.49□□□□□ -0.25
CHERP-201ENST00000198939 KDM5AP29375 1690 aaKnown RBP13.48□□□□□ -0.25
CHERP-201ENST00000198939 ANKLE2Q86XL3 938 aa13.48□□□□□ -0.25
CHERP-201ENST00000198939 DCAF11Q8TEB1 546 aa13.48□□□□□ -0.25
CHERP-201ENST00000198939 CCDC7Q96M83 1385 aa13.48□□□□□ -0.25
CHERP-201ENST00000198939 SPATA31E1Q6ZUB1 1445 aa13.47□□□□□ -0.25
CHERP-201ENST00000198939 NFKBIBQ15653 356 aa13.47□□□□□ -0.25
CHERP-201ENST00000198939 FRAT1Q92837 279 aaPredicted RBP13.47□□□□□ -0.25
CHERP-201ENST00000198939 L3MBTL2Q969R5 705 aa13.47□□□□□ -0.25
CHERP-201ENST00000198939 BACH2Q9BYV9 841 aa13.47□□□□□ -0.25
CHERP-201ENST00000198939 CEP170BQ9Y4F5 1589 aaPredicted RBP13.46□□□□□ -0.25
CHERP-201ENST00000198939 NAP1L5Q96NT1 182 aaPredicted RBP13.46□□□□□ -0.25
CHERP-201ENST00000198939 TMEM2Q9UHN6 1383 aa13.46□□□□□ -0.25
CHERP-201ENST00000198939 VSIG10Q8N0Z9 540 aa13.46□□□□□ -0.26
CHERP-201ENST00000198939 EXOC6Q8TAG9 804 aa13.46□□□□□ -0.26
CHERP-201ENST00000198939 MYO3AQ8NEV4 1616 aa13.46□□□□□ -0.26
CHERP-201ENST00000198939 TXNDC2Q86VQ3 553 aa13.45□□□□□ -0.26
CHERP-201ENST00000198939 RIMS2Q9UQ26 1411 aa13.45□□□□□ -0.26
CHERP-201ENST00000198939 MS4A1P11836 297 aa13.45□□□□□ -0.26
CHERP-201ENST00000198939 KDM2AQ9Y2K7 1162 aa13.45□□□□□ -0.26
CHERP-201ENST00000198939 PKNOX2Q96KN3 472 aa13.44□□□□□ -0.26
CHERP-201ENST00000198939 ZFYVE9O95405 1425 aa13.44□□□□□ -0.26
CHERP-201ENST00000198939 SLC4A3P48751 1232 aa13.44□□□□□ -0.26
CHERP-201ENST00000198939 TMEM131LA2VDJ0 1609 aa13.43□□□□□ -0.26
CHERP-201ENST00000198939 DMRT2Q9Y5R5 561 aa13.43□□□□□ -0.26
CHERP-201ENST00000198939 ZNF142P52746 1687 aaPredicted RBP13.42□□□□□ -0.26
CHERP-201ENST00000198939 RNF123Q5XPI4 1314 aa13.42□□□□□ -0.26
CHERP-201ENST00000198939 RRP1P56182 461 aaKnown RBP13.41□□□□□ -0.26
CHERP-201ENST00000198939 MYOM2P54296 1465 aa13.41□□□□□ -0.26
CHERP-201ENST00000198939 SLIT1O75093 1534 aa13.4□□□□□ -0.26
CHERP-201ENST00000198939 UBR1Q8IWV7 1749 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms