RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 RAB27AP51159 221 aa12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 MARSP56192 900 aaKnown RBP12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 NFIL3Q16649 462 aa12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 MIIPQ5JXC2 388 aa12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 ATAT1Q5SQI0 421 aa12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 MAEAQ7L5Y9 396 aa12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 CNGA4Q8IV77 575 aa12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 TC2NQ8N9U0 490 aa12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 TDRD5Q8NAT2 981 aaKnown RBP12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 CCDC51Q96ER9 411 aa12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 EEF2KMTQ96G04 330 aa12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 FIZ1Q96SL8 496 aa12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 NUP58Q9BVL2 599 aa12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 INO80BQ9C086 356 aaPredicted RBP12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 GBP3Q9H0R5 595 aa12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 DHX33Q9H6R0 707 aaKnown RBP12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 SPTLC3Q9NUV7 552 aa12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 DENND4AQ7Z401 1863 aa12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 RIF1Q5UIP0 2472 aaKnown RBP12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 PTPRZ1P23471 2315 aaPredicted RBP12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 DGAT1O75907 488 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 EFEMP2O95967 443 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 CNPP09543 421 aaKnown RBP12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 NR2F2P24468 414 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 HOXD13P35453 343 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 CLCN4P51793 760 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 RNASELQ05823 741 aaKnown RBP12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 GOLGA8FQ08AF8 430 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 GOLGA8DPQ0D2H9 430 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 BMS1Q14692 1282 aaKnown RBP12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 GPR149Q86SP6 731 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 MCPH1Q8NEM0 835 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 GOLGA5Q8TBA6 731 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 CPLX3Q8WVH0 158 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 PRPF31Q8WWY3 499 aaKnown RBP12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 KIFAP3Q92845 792 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 TMEM143Q96AN5 459 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 IQCDQ96DY2 449 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 KLHL5Q96PQ7 755 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 PANX2Q96RD6 677 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 ERGIC2Q96RQ1 377 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 IRF2BPLQ9H1B7 796 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 NDST4Q9H3R1 872 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 ST6GALNAC4Q9H4F1 302 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 SFXN1Q9H9B4 322 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 DMDP11532 3685 aa12.9□□□□□ -0.34
ERGIC3-220ENST00000640748 CARNS1A5YM72 827 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 SLC16A3O15427 465 aaKnown RBP12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 MFAP3LO75121 409 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 PPP1R37O75864 691 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 NR3C1P04150 777 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 GYPCP04921 128 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 NPR3P17342 541 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 ADKP55263 362 aaKnown RBP12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 PPP2R3AQ06190 1150 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 LAMTOR4Q0VGL1 99 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 ZC2HC1CQ53FD0 456 aaPredicted RBP12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 CWF19L1Q69YN2 538 aaKnown RBP12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 ASTLQ6HA08 431 aaPredicted RBP12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 HS2ST1Q7LGA3 356 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 ASCL5Q7RTU5 278 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 TAS1R1Q7RTX1 841 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 FRMD5Q7Z6J6 570 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 SYCP3Q8IZU3 236 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 PLCD3Q8N3E9 789 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 C17orf53Q8N3J3 647 aaPredicted RBP12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 SMG8Q8ND04 991 aaKnown RBP12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 HVCN1Q96D96 273 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 PGBD4Q96DM1 585 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 SNX27Q96L92 541 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 PCMTD1Q96MG8 357 aaPredicted RBP12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 ACCSQ96QU6 501 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 BAG1Q99933 345 aaPredicted RBP12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 STRA6Q9BX79 667 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 NAA15Q9BXJ9 866 aaKnown RBP12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 TMEM206Q9H813 350 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 RSAD1Q9HA92 442 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 C17orf75Q9HAS0 396 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 METTL14Q9HCE5 456 aaKnown RBP12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 MARCH5Q9NX47 278 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 KCNG1Q9UIX4 513 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 ZMYM2Q9UBW7 1377 aa12.89□□□□□ -0.35
ERGIC3-220ENST00000640748 NRP1O14786 923 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 INPPL1O15357 1258 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 ARHGAP6O43182 974 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 TGFB1I1O43294 461 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 CCP110O43303 1012 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 STX10O60499 249 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 N4BP1O75113 896 aaKnown RBP12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 POMCP01189 267 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 SRGAP2CP0DJJ0 459 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 EPB41P11171 864 aaKnown RBP12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 CASP14P31944 242 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 NBL1P41271 181 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 SMTNP53814 917 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 NCKAP1LP55160 1127 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 PEX3P56589 373 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 MYBPC2Q14324 1141 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 SYCP1Q15431 976 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 CEP135Q66GS9 1140 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms