RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.53■□□□□ 0.562e-7■■■■■ 62.8
SCARB2-223ENST00000640640 ZSWIM1Q9BR11 485 aa18.53■□□□□ 0.56
SCARB2-223ENST00000640640 FAM49BQ9NUQ9 324 aa18.53■□□□□ 0.56
SCARB2-223ENST00000640640 FAM198AQ9UFP1 575 aa18.53■□□□□ 0.56
SCARB2-223ENST00000640640 SPAG7O75391 227 aa18.53■□□□□ 0.56
SCARB2-223ENST00000640640 HSPA4LO95757 839 aa18.53■□□□□ 0.56
SCARB2-223ENST00000640640 CYP2C9P11712 490 aa18.53■□□□□ 0.56
SCARB2-223ENST00000640640 GZMAP12544 262 aa18.53■□□□□ 0.56
SCARB2-223ENST00000640640 CYP11B1P15538 503 aa18.53■□□□□ 0.56
SCARB2-223ENST00000640640 BRD2P25440 801 aaKnown RBP18.53■□□□□ 0.56
SCARB2-223ENST00000640640 NLRP11P59045 1033 aaKnown RBP18.53■□□□□ 0.56
SCARB2-223ENST00000640640 FKBP1AP62942 108 aaKnown RBP18.53■□□□□ 0.56
SCARB2-223ENST00000640640 ERO1BQ86YB8 467 aa18.53■□□□□ 0.56
SCARB2-223ENST00000640640 POP1Q99575 1024 aaKnown RBP18.53■□□□□ 0.56
SCARB2-223ENST00000640640 L1RE1Q9UN81 338 aa18.53■□□□□ 0.56
SCARB2-223ENST00000640640 EML1O00423 815 aa18.53■□□□□ 0.56
SCARB2-223ENST00000640640 PLSCR1O15162 318 aa18.53■□□□□ 0.56
SCARB2-223ENST00000640640 KCNN4O15554 427 aa18.53■□□□□ 0.56
SCARB2-223ENST00000640640 APRTP07741 180 aa18.53■□□□□ 0.56
SCARB2-223ENST00000640640 VIL1P09327 827 aaKnown RBP18.53■□□□□ 0.56
SCARB2-223ENST00000640640 PAMP19021 973 aa18.53■□□□□ 0.56
SCARB2-223ENST00000640640 XPAP23025 273 aaPredicted RBP18.53■□□□□ 0.56
SCARB2-223ENST00000640640 CYTH2Q99418 400 aa18.53■□□□□ 0.56
SCARB2-223ENST00000640640 TTC1Q99614 292 aa18.53■□□□□ 0.56
SCARB2-223ENST00000640640 NEU2Q9Y3R4 380 aa18.53■□□□□ 0.56
SCARB2-223ENST00000640640 ANGPTL3Q9Y5C1 460 aa18.53■□□□□ 0.56
SCARB2-223ENST00000640640 HSPA9P38646 679 aaKnown RBP18.52■□□□□ 0.56
SCARB2-223ENST00000640640 KYNUQ16719 465 aa18.52■□□□□ 0.56
SCARB2-223ENST00000640640 KLC3Q6P597 504 aa18.52■□□□□ 0.56
SCARB2-223ENST00000640640 SV2AQ7L0J3 742 aa18.52■□□□□ 0.56
SCARB2-223ENST00000640640 LRRC37BQ96QE4 947 aa18.52■□□□□ 0.56
SCARB2-223ENST00000640640 CST8O60676 142 aa18.52■□□□□ 0.56
SCARB2-223ENST00000640640 MOCS2O96007 188 aaPredicted RBP18.52■□□□□ 0.56
SCARB2-223ENST00000640640 PGM5Q15124 567 aa18.52■□□□□ 0.56
SCARB2-223ENST00000640640 TMC2Q8TDI7 906 aa18.52■□□□□ 0.56
SCARB2-223ENST00000640640 SLC35C1Q96A29 364 aa18.52■□□□□ 0.56
SCARB2-223ENST00000640640 MTMR8Q96EF0 704 aa18.52■□□□□ 0.56
SCARB2-223ENST00000640640 SLC13A1Q9BZW2 595 aa18.52■□□□□ 0.56
SCARB2-223ENST00000640640 OSGEPQ9NPF4 335 aa18.52■□□□□ 0.56
SCARB2-223ENST00000640640 RAB6BQ9NRW1 208 aa18.52■□□□□ 0.56
SCARB2-223ENST00000640640 DBR1Q9UK59 544 aaKnown RBP18.52■□□□□ 0.56
SCARB2-223ENST00000640640 CASQ2O14958 399 aaPredicted RBP18.52■□□□□ 0.55
SCARB2-223ENST00000640640 S100BP04271 92 aaPredicted RBP18.52■□□□□ 0.55
SCARB2-223ENST00000640640 RALAP11233 206 aa18.52■□□□□ 0.55
SCARB2-223ENST00000640640 CYP2B6P20813 491 aa18.52■□□□□ 0.55
SCARB2-223ENST00000640640 LONRF1Q17RB8 773 aa18.52■□□□□ 0.55
SCARB2-223ENST00000640640 C1orf131Q8NDD1 294 aaKnown RBP18.52■□□□□ 0.55
SCARB2-223ENST00000640640 AKT1S1Q96B36 256 aa18.52■□□□□ 0.55
SCARB2-223ENST00000640640 HPDLQ96IR7 371 aa18.52■□□□□ 0.55
SCARB2-223ENST00000640640 MRIQ9BWK5 157 aa18.52■□□□□ 0.55
SCARB2-223ENST00000640640 ADAM33Q9BZ11 813 aa18.52■□□□□ 0.55
SCARB2-223ENST00000640640 AIPL1Q9NZN9 384 aa18.52■□□□□ 0.55
SCARB2-223ENST00000640640 RBP3P10745 1247 aa18.51■□□□□ 0.55
SCARB2-223ENST00000640640 C2CD6Q53TS8 623 aa18.51■□□□□ 0.55
SCARB2-223ENST00000640640 CSPG5O95196 566 aa18.51■□□□□ 0.55
SCARB2-223ENST00000640640 ZC3H11AO75152 810 aaKnown RBP eCLIP18.51■□□□□ 0.55
SCARB2-223ENST00000640640 CTSHP09668 335 aa18.51■□□□□ 0.55
SCARB2-223ENST00000640640 CETPP11597 493 aa18.51■□□□□ 0.55
SCARB2-223ENST00000640640 COILP38432 576 aaPredicted RBP18.51■□□□□ 0.55
SCARB2-223ENST00000640640 FKBP1CQ5VVH2 108 aa18.51■□□□□ 0.55
SCARB2-223ENST00000640640 ITPRIPL1Q6GPH6 555 aa18.51■□□□□ 0.55
SCARB2-223ENST00000640640 MTFR1LQ9H019 292 aa18.51■□□□□ 0.55
SCARB2-223ENST00000640640 PGK2P07205 417 aa18.51■□□□□ 0.55
SCARB2-223ENST00000640640 MX2P20592 715 aa18.51■□□□□ 0.55
SCARB2-223ENST00000640640 CLCN3P51790 818 aa18.51■□□□□ 0.55
SCARB2-223ENST00000640640 FUT2Q10981 343 aa18.51■□□□□ 0.55
SCARB2-223ENST00000640640 MAPK7Q13164 816 aa18.51■□□□□ 0.55
SCARB2-223ENST00000640640 SMTNL2Q2TAL5 461 aa18.51■□□□□ 0.55
SCARB2-223ENST00000640640 SLC5A5Q92911 643 aa18.51■□□□□ 0.55
SCARB2-223ENST00000640640 GBP5Q96PP8 586 aa18.51■□□□□ 0.55
SCARB2-223ENST00000640640 CCT8L2Q96SF2 557 aa18.51■□□□□ 0.55
SCARB2-223ENST00000640640 TRABDQ9H4I3 376 aa18.51■□□□□ 0.55
SCARB2-223ENST00000640640 EIF3HO15372 352 aaKnown RBP eCLIP18.5■□□□□ 0.55
SCARB2-223ENST00000640640 ITGB3P05106 788 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 FOXP3Q9BZS1 431 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 TPX2Q9ULW0 747 aaKnown RBP18.5■□□□□ 0.55
SCARB2-223ENST00000640640 CACNA1FO60840 1977 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 PPP1R12AO14974 1030 aaPredicted RBP18.5■□□□□ 0.55
SCARB2-223ENST00000640640 FGRP09769 529 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 SYCP2LQ5T4T6 812 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 BTBD8Q5XKL5 378 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 SPATA18Q8TC71 538 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 URGCPQ8TCY9 931 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 BTBD6Q96KE9 485 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 EPN3Q9H201 632 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 Q9H521 79 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.5■□□□□ 0.55
SCARB2-223ENST00000640640 CD4P01730 458 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 TM4SF1P30408 202 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 PLA2G4AP47712 749 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 FBXO41Q8TF61 875 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 HAS1Q92839 578 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 ARHGEF26Q96DR7 871 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 MTMR12Q9C0I1 747 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 VGLL3A8MV65 326 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 VWA5AO00534 786 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 OPHN1O60890 802 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 SLURP2P0DP57 97 aa18.5■□□□□ 0.55
SCARB2-223ENST00000640640 SESN2P58004 480 aaPredicted RBP18.5■□□□□ 0.55
SCARB2-223ENST00000640640 SLC29A2Q14542 456 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms