RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 CLNS1AP54105 237 aaKnown RBP17.58■□□□□ 0.41
HNRNPU-228ENST00000640306 P3H1Q32P28 736 aa17.58■□□□□ 0.41
HNRNPU-228ENST00000640306 SEZ6Q53EL9 994 aa17.58■□□□□ 0.41
HNRNPU-228ENST00000640306 IWS1Q96ST2 819 aa17.58■□□□□ 0.41
HNRNPU-228ENST00000640306 FHDC1Q9C0D6 1143 aaPredicted RBP17.58■□□□□ 0.41
HNRNPU-228ENST00000640306 NKIRAS1Q9NYS0 192 aa17.58■□□□□ 0.41
HNRNPU-228ENST00000640306 COQ4Q9Y3A0 265 aa17.58■□□□□ 0.41
HNRNPU-228ENST00000640306 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.58■□□□□ 0.41
HNRNPU-228ENST00000640306 CNTNAP1P78357 1384 aa17.58■□□□□ 0.41
HNRNPU-228ENST00000640306 KCNA3P22001 575 aa17.58■□□□□ 0.4
HNRNPU-228ENST00000640306 COPS2P61201 443 aa17.58■□□□□ 0.4
HNRNPU-228ENST00000640306 FASTKD3Q14CZ7 662 aaKnown RBP17.58■□□□□ 0.4
HNRNPU-228ENST00000640306 PGM5Q15124 567 aa17.58■□□□□ 0.4
HNRNPU-228ENST00000640306 TMEM270Q6UE05 265 aa17.58■□□□□ 0.4
HNRNPU-228ENST00000640306 TTLL6Q8N841 843 aa17.58■□□□□ 0.4
HNRNPU-228ENST00000640306 NSMCE1Q8WV22 266 aa17.58■□□□□ 0.4
HNRNPU-228ENST00000640306 RBM15Q96T37 977 aaKnown RBP eCLIP17.58■□□□□ 0.42e-7■■■□□ 17.8
HNRNPU-228ENST00000640306 ZNF277Q9NRM2 450 aaPredicted RBP17.58■□□□□ 0.4
HNRNPU-228ENST00000640306 ZNFX1Q9P2E3 1918 aaKnown RBP17.58■□□□□ 0.4
HNRNPU-228ENST00000640306 PCNTO95613 3336 aa17.58■□□□□ 0.4
HNRNPU-228ENST00000640306 FDX1P10109 184 aa17.58■□□□□ 0.4
HNRNPU-228ENST00000640306 DNAJC3Q13217 504 aa17.58■□□□□ 0.4
HNRNPU-228ENST00000640306 FAM182AQ5T1J6 154 aa17.58■□□□□ 0.4
HNRNPU-228ENST00000640306 TMEM63BQ5T3F8 832 aa17.58■□□□□ 0.4
HNRNPU-228ENST00000640306 C4orf19Q8IY42 314 aa17.58■□□□□ 0.4
HNRNPU-228ENST00000640306 OSBPL8Q9BZF1 889 aa17.58■□□□□ 0.4
HNRNPU-228ENST00000640306 SAYSD1Q9NPB0 183 aa17.58■□□□□ 0.4
HNRNPU-228ENST00000640306 ARL2BPQ9Y2Y0 163 aa17.58■□□□□ 0.4
HNRNPU-228ENST00000640306 WDR64B1ANS9 1081 aa17.57■□□□□ 0.4
HNRNPU-228ENST00000640306 ZNF862O60290 1169 aa17.57■□□□□ 0.4
HNRNPU-228ENST00000640306 ANP32DO95626 131 aa17.57■□□□□ 0.4
HNRNPU-228ENST00000640306 HARSP12081 509 aaKnown RBP17.57■□□□□ 0.4
HNRNPU-228ENST00000640306 ATP5DP30049 168 aa17.57■□□□□ 0.4
HNRNPU-228ENST00000640306 NAA25Q14CX7 972 aa17.57■□□□□ 0.4
HNRNPU-228ENST00000640306 PCNX4Q63HM2 1172 aa17.57■□□□□ 0.4
HNRNPU-228ENST00000640306 C4orf33Q8N1A6 199 aa17.57■□□□□ 0.4
HNRNPU-228ENST00000640306 OGFOD1Q8N543 542 aa17.57■□□□□ 0.4
HNRNPU-228ENST00000640306 GRK7Q8WTQ7 553 aa17.57■□□□□ 0.4
HNRNPU-228ENST00000640306 SLCO1B3Q9NPD5 702 aa17.57■□□□□ 0.4
HNRNPU-228ENST00000640306 ADAM22Q9P0K1 906 aa17.57■□□□□ 0.4
HNRNPU-228ENST00000640306 GOLGA8SH3BPF8 625 aa17.57■□□□□ 0.4
HNRNPU-228ENST00000640306 GOLGA8MH3BSY2 632 aa17.57■□□□□ 0.4
HNRNPU-228ENST00000640306 BANF1O75531 89 aa17.57■□□□□ 0.4
HNRNPU-228ENST00000640306 GPD1LQ8N335 351 aa17.57■□□□□ 0.4
HNRNPU-228ENST00000640306 FNBP1Q96RU3 617 aa17.57■□□□□ 0.4
HNRNPU-228ENST00000640306 TBC1D22BQ9NU19 505 aa17.57■□□□□ 0.4
HNRNPU-228ENST00000640306 EIF4E1BA6NMX2 242 aaKnown RBP17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 PIK3CAP42336 1068 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 PTPRJQ12913 1337 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 R3HDM1Q15032 1099 aaKnown RBP17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 ARHGEF16Q5VV41 709 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 SLCO2A1Q92959 643 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 WNK4Q96J92 1243 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 ZBTB45Q96K62 511 aaPredicted RBP17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 MFSD14AQ96MC6 490 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 PITPNM3Q9BZ71 974 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 ST6GALNAC4Q9H4F1 302 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 UMODL1Q5DID0 1318 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 EXOC1LA0A1B0GW35 172 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 MAPK13O15264 365 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 HLA-DRAP01903 254 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 MAGEA4P43358 317 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 RPL7AP62424 266 aaKnown RBP17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 BNIP1Q12981 228 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 SWSAP1Q6NVH7 229 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 MIS18BP1Q6P0N0 1132 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 C10orf88Q9H8K7 445 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 KLHL14Q9P2G3 628 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 SEPT9Q9UHD8 586 aaPredicted RBP17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 DNPEPQ9ULA0 475 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 CTDP1Q9Y5B0 961 aaPredicted RBP17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 PCDHB4Q9Y5E5 795 aa17.56■□□□□ 0.4
HNRNPU-228ENST00000640306 CFAP73A6NFT4 308 aa17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 CDH16O75309 829 aa17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 WDR4P57081 412 aaKnown RBP17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 NLRP11P59045 1033 aaKnown RBP17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 GALNTL6Q49A17 601 aa17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 ZBTB41Q5SVQ8 909 aa17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 ECHDC2Q86YB7 292 aa17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 ZNF148Q9UQR1 794 aa17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 PCDHB2Q9Y5E7 798 aa17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 TLR3O15455 904 aaKnown RBP17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 DIAPH2O60879 1101 aa17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 PROSCO94903 275 aa17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 IFNB1P01574 187 aa17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 TAC1P20366 129 aa17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 KLF1Q13351 362 aaPredicted RBP17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 ZNF394Q53GI3 561 aa17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 BRDTQ58F21 947 aaPredicted RBP17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 WDR44Q5JSH3 913 aa17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 TDRD10Q5VZ19 366 aaKnown RBP17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 ANKLE1Q8NAG6 615 aa17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 KCNV2Q8TDN2 545 aa17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 TMEM237Q96Q45 408 aa17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 PDCD2LQ9BRP1 358 aa17.55■□□□□ 0.4
HNRNPU-228ENST00000640306 RNASELQ05823 741 aaKnown RBP17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 RSBN1LQ6PCB5 846 aaPredicted RBP17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 ARHGEF18Q6ZSZ5 1173 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 TAS1R3Q7RTX0 852 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 ERICH1Q86X53 443 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms