RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 ARHGAP28Q9P2N2 729 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 ZNF69Q9UC07 566 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 FNDC3AQ9Y2H6 1198 aaKnown RBP8.69□□□□□ -1.02
SCARB2-220ENST00000640076 GRIN2DO15399 1336 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 C17orf102A2RUQ5 167 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 TRIM49BA6NDI0 452 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 SMTNL1A8MU46 457 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 FBXO24O75426 580 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 IL2RAP01589 272 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 GJB1P08034 283 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 GNAT1P11488 350 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 TMOD1P28289 359 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 GTF2BQ00403 316 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 CAPSQ13938 189 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 ZCWPW2Q504Y3 356 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 ANKRD40Q6AI12 368 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 FOXR2Q6PJQ5 311 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 SESTD1Q86VW0 696 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 PASD1Q8IV76 773 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 KSR1Q8IVT5 923 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 NELFCDQ8IXH7 590 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 KIAA0319LQ8IZA0 1049 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 KCNN1Q92952 543 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 TRIM44Q96DX7 344 aaPredicted RBP8.68□□□□□ -1.02
SCARB2-220ENST00000640076 SMAD5Q99717 465 aaKnown RBP8.68□□□□□ -1.02
SCARB2-220ENST00000640076 HSD3B7Q9H2F3 369 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 GRPEL1Q9HAV7 217 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 GTF2IRD1Q9UHL9 959 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 NFE2L3Q9Y4A8 694 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 ZMYM2Q9UBW7 1377 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 BICDL2A1A5D9 508 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 DENND3A2RUS2 1198 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 LRRIQ4A6NIV6 560 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 H0YCG3 227 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 GOLGA6L19H0YKK7 550 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 ASAP2O43150 1006 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 VDRP11473 427 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 CPEP16870 476 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 SH3BP2P78314 561 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 ZNF200P98182 395 aaPredicted RBP8.68□□□□□ -1.02
SCARB2-220ENST00000640076 LRRC63Q05C16 580 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 KNOP1Q1ED39 458 aaKnown RBP8.68□□□□□ -1.02
SCARB2-220ENST00000640076 KIAA0319Q5VV43 1072 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 SPATA1Q5VX52 437 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 RHPN2Q8IUC4 686 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 DEPTORQ8TB45 409 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 PLD4Q96BZ4 506 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 HVCN1Q96D96 273 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 GLT1D1Q96MS3 346 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 CHRDQ9H2X0 955 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 AASDHPPTQ9NRN7 309 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 PUF60Q9UHX1 559 aaKnown RBP8.68□□□□□ -1.02
SCARB2-220ENST00000640076 OGDHLQ9ULD0 1010 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 TBX20Q9UMR3 447 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 PHF24Q9UPV7 400 aa8.68□□□□□ -1.02
SCARB2-220ENST00000640076 SMIM35A0A1B0GVV1 85 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 B2RBV5 119 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 KBTBD13C9JR72 458 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 DNM1LO00429 736 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 PDXKO00764 312 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 VTNP04004 478 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 SRGAP2CP0DJJ0 459 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 CYP2C9P11712 490 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 ABCD1P33897 745 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 MRE11P49959 708 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 ITGA7Q13683 1181 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 UVSSAQ2YD98 709 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 FAM47CQ5HY64 1035 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 CDCA2Q69YH5 1023 aaPredicted RBP8.67□□□□□ -1.02
SCARB2-220ENST00000640076 GDF6Q6KF10 455 aaPredicted RBP8.67□□□□□ -1.02
SCARB2-220ENST00000640076 RUFY4Q6ZNE9 571 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 STRA8Q7Z7C7 330 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 TEX19Q8NA77 164 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 RNF149Q8NC42 400 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 NLRP4Q96MN2 994 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 MAP7D2Q96T17 732 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 FAM49AQ9H0Q0 323 aaPredicted RBP8.67□□□□□ -1.02
SCARB2-220ENST00000640076 IKZF4Q9H2S9 585 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 TRAF3IP3Q9Y228 551 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 AKT3Q9Y243 479 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 HRH3Q9Y5N1 445 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 SIP14410 1827 aa8.67□□□□□ -1.02
SCARB2-220ENST00000640076 A0A1W2PQ45 241 aaPredicted RBP8.66□□□□□ -1.02
SCARB2-220ENST00000640076 A0A1W2PQY0 241 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 EREGO14944 169 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 TGFB1I1O43294 461 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 LILRA1O75019 489 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 HOXB1P14653 301 aaPredicted RBP8.66□□□□□ -1.02
SCARB2-220ENST00000640076 ZNF18P17022 549 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 EFNA5P52803 228 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 TFDP1Q14186 410 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 ZC3H12BQ5HYM0 836 aaKnown RBP8.66□□□□□ -1.02
SCARB2-220ENST00000640076 C6orf15Q6UXA7 325 aaPredicted RBP8.66□□□□□ -1.02
SCARB2-220ENST00000640076 LSRQ86X29 649 aaPredicted RBP8.66□□□□□ -1.02
SCARB2-220ENST00000640076 MAP4K3Q8IVH8 894 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 CSGALNACT2Q8N6G5 542 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 RBBP8NLQ8NC74 664 aaPredicted RBP8.66□□□□□ -1.02
SCARB2-220ENST00000640076 FBXO27Q8NI29 283 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 ACCSQ96QU6 501 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 CTAGE1Q96RT6 745 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms