RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	RPL26L1	Q9UNX3	145 aa	Known RBP	11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	RIMS1	Q86UR5	1692 aa	Known RBP	11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	IPO5	O00410	1097 aa	Known RBP	11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	GSC2	O15499	205 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	PEX1	O43933	1283 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	DAB1	O75553	588 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	GGPS1	O95749	300 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	RAP1GDS1	P52306	607 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	RRP1B	Q14684	758 aa	Known RBP	11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	POU5F2	Q8N7G0	328 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	APOL6	Q9BWW8	343 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	MAK16	Q9BXY0	300 aa	Known RBP	11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	MTFR1L	Q9H019	292 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	FBXO6	Q9NRD1	293 aa	Predicted RBP	11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	ATAD3A	Q9NVI7	634 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	DAPK2	Q9UIK4	370 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	SLIT1	O75093	1534 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	PFAS	O15067	1338 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	FLT1	P17948	1338 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	COL15A1	P39059	1388 aa		11.95	□□□□□ -0.5
SPIN3-231	ENST00000639895	MYMK	A6NI61	221 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	MATN2	O00339	956 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	CCDC159	P0C7I6	412 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	NCKAP1L	P55160	1127 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	ITGAD	Q13349	1161 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	CYFIP1	Q7L576	1253 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	CAPSL	Q8WWF8	208 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	TIMMDC1	Q9NPL8	285 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	PRKAG3	Q9UGI9	489 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	ASAP1	Q9ULH1	1129 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	RTCB	Q9Y3I0	505 aa	Known RBP	11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	MEI4	A8MW99	385 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	KIAA0391	O15091	583 aa	Known RBP	11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	GJB6	O95452	261 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	PENK	P01210	267 aa	Predicted RBP	11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	TCN1	P20061	433 aa	Predicted RBP	11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	LPCAT4	Q643R3	524 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	RINT1	Q6NUQ1	792 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	GJB7	Q6PEY0	223 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	ZNF75CP	Q92670	426 aa	Predicted RBP	11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	CCDC127	Q96BQ5	260 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	CCDC28B	Q9BUN5	200 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	SPC25	Q9HBM1	224 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	CHKB	Q9Y259	395 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	UMODL1	Q5DID0	1318 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	MROH7	Q68CQ1	1323 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	C15orf38-AP3S2	A0A0A6YYH1	394 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	SERPINB1	P30740	379 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	PSMC2	P35998	433 aa	Known RBP	11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	ITPRIPL1	Q6GPH6	555 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	ARPIN	Q7Z6K5	226 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	PPM1N	Q8N819	430 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	ATL2	Q8NHH9	583 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	FAM111A	Q96PZ2	611 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	NUP85	Q9BW27	656 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	WNT8A	Q9H1J5	351 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	NEU2	Q9Y3R4	380 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	MEIS1	O00470	390 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	RAG1	P15918	1043 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	MTMR2	Q13614	643 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	ADRM1	Q16186	407 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	TCHHL1	Q5QJ38	904 aa	Predicted RBP	11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	CALML6	Q8TD86	181 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	DQX1	Q8TE96	717 aa	Known RBP	11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	BTBD6	Q96KE9	485 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	SH3GL1	Q99961	368 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	ADA2	Q9NZK5	511 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	USP20	Q9Y2K6	914 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	GMEB1	Q9Y692	573 aa		11.94	□□□□□ -0.5
SPIN3-231	ENST00000639895	KDM3A	Q9Y4C1	1321 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	PXDN	Q92626	1479 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	AKAP12	Q02952	1782 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	AIM2	O14862	343 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	KRT37	O76014	449 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	TAC1	P20366	129 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	EIF6	P56537	245 aa	Known RBP	11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	RPS6	P62753	249 aa	Known RBP	11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	PPP2R5D	Q14738	602 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	CLNK	Q7Z7G1	428 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	USP37	Q86T82	979 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	CATSPER3	Q86XQ3	398 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	ZNF786	Q8N393	782 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	KCNK16	Q96T55	309 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	C7orf25	Q9BPX7	421 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	ARL8B	Q9NVJ2	186 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	BCS1L	Q9Y276	419 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	CARD8	Q9Y2G2	431 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	SIK3	Q9Y2K2	1263 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	SPTLC1	O15269	473 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	MAGEB3	O15480	346 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	PLA2G4B	P0C869	781 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	MAPK10	P53779	464 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	PFKFB3	Q16875	520 aa	Predicted RBP	11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	TMEM63B	Q5T3F8	832 aa		11.93	□□□□□ -0.5
SPIN3-231	ENST00000639895	C1QTNF12	Q5T7M4	302 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms