RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 KIF22Q14807 665 aa0.45□□□□□ -2.34
CCDC7-215ENST00000639629 PCBP1Q15365 356 aaKnown RBP eCLIP0.45□□□□□ -2.34
CCDC7-215ENST00000639629 MORN5Q5VZ52 161 aa0.45□□□□□ -2.34
CCDC7-215ENST00000639629 RNF219Q5W0B1 726 aaPredicted RBP0.45□□□□□ -2.34
CCDC7-215ENST00000639629 Q6ZNX1 250 aa0.45□□□□□ -2.34
CCDC7-215ENST00000639629 DNAJC10Q8IXB1 793 aa0.45□□□□□ -2.34
CCDC7-215ENST00000639629 RSC1A1Q92681 617 aa0.45□□□□□ -2.34
CCDC7-215ENST00000639629 KAT2AQ92830 837 aa0.45□□□□□ -2.34
CCDC7-215ENST00000639629 SCAMP4Q969E2 229 aa0.45□□□□□ -2.34
CCDC7-215ENST00000639629 ZFYVE19Q96K21 471 aa0.45□□□□□ -2.34
CCDC7-215ENST00000639629 DPYSL5Q9BPU6 564 aa0.45□□□□□ -2.34
CCDC7-215ENST00000639629 ARHGAP39Q9C0H5 1083 aa0.45□□□□□ -2.34
CCDC7-215ENST00000639629 PUS7LQ9H0K6 701 aaKnown RBP0.45□□□□□ -2.34
CCDC7-215ENST00000639629 SLC12A5Q9H2X9 1139 aa0.45□□□□□ -2.34
CCDC7-215ENST00000639629 CCSER2Q9H7U1 834 aa0.45□□□□□ -2.34
CCDC7-215ENST00000639629 RXFP1Q9HBX9 757 aa0.45□□□□□ -2.34
CCDC7-215ENST00000639629 SFMBT1Q9UHJ3 866 aa0.45□□□□□ -2.34
CCDC7-215ENST00000639629 E9PLN8 166 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 M0R2C6 588 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 CCP110O43303 1012 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 AKAP10O43572 662 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 SOX30O94993 753 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 KCNA2P16389 499 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 PTX3P26022 381 aaPredicted RBP0.44□□□□□ -2.34
CCDC7-215ENST00000639629 GRIN1Q05586 938 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 RAPGEF1Q13905 1077 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 PABPC1LQ4VXU2 614 aaKnown RBP0.44□□□□□ -2.34
CCDC7-215ENST00000639629 TMCO4Q5TGY1 634 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 PRAMEF18Q5VWM3 479 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 NXNQ6DKJ4 435 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 NLGN4YQ8NFZ3 816 aaPredicted RBP0.44□□□□□ -2.34
CCDC7-215ENST00000639629 ZNF480Q8WV37 535 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 RPGRQ92834 1020 aaKnown RBP0.44□□□□□ -2.34
CCDC7-215ENST00000639629 COA7Q96BR5 231 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 MFSD3Q96ES6 412 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 FAM84BQ96KN1 310 aaPredicted RBP0.44□□□□□ -2.34
CCDC7-215ENST00000639629 WDR24Q96S15 920 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 VKORC1Q9BQB6 163 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 BCL11AQ9H165 835 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 C2orf42Q9NWW7 574 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 DLL3Q9NYJ7 618 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 DKK4Q9UBT3 224 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 ZNF580Q9UK33 172 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 FAN1Q9Y2M0 1017 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 PRAMEF22A3QJZ6 481 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 FOXN3O00409 490 aaPredicted RBP0.44□□□□□ -2.34
CCDC7-215ENST00000639629 IKBKBO14920 756 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 ALDH1A2O94788 518 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 PRSS23O95084 383 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 SNRPA1P09661 255 aaKnown RBP0.44□□□□□ -2.34
CCDC7-215ENST00000639629 TACR1P25103 407 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 CYP2C19P33261 490 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 CLRN1P58418 232 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 EIF2B5Q13144 721 aaKnown RBP0.44□□□□□ -2.34
CCDC7-215ENST00000639629 GNL2Q13823 731 aaKnown RBP0.44□□□□□ -2.34
CCDC7-215ENST00000639629 HABP2Q14520 560 aaPredicted RBP0.44□□□□□ -2.34
CCDC7-215ENST00000639629 LCE3CQ5T5A8 94 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 ATG9BQ674R7 924 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 CHST15Q7LFX5 561 aaPredicted RBP0.44□□□□□ -2.34
CCDC7-215ENST00000639629 NEK8Q86SG6 692 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 IGSF22Q8N9C0 903 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 CLRN3Q8NCR9 226 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 CHST13Q8NET6 341 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 CAGE1Q8TC20 777 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 RTF1Q92541 710 aaKnown RBP0.44□□□□□ -2.34
CCDC7-215ENST00000639629 HIST1H2AHQ96KK5 128 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 HIST1H2AJQ99878 128 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 C1QTNF5Q9BXJ0 243 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 PRSS22Q9GZN4 317 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 VPS33BQ9H267 617 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 PCDHA9Q9Y5H5 950 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 HS3ST3A1Q9Y663 406 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 ZMYM3Q14202 1370 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 COL27A1Q8IZC6 1860 aaPredicted RBP0.44□□□□□ -2.34
CCDC7-215ENST00000639629 DNAJC9-AS1A6NH13 148 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 FBLL1A6NHQ2 334 aaKnown RBP0.44□□□□□ -2.34
CCDC7-215ENST00000639629 FAM171A2A8MVW0 826 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 VWC2LB2RUY7 222 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 LEFTY2O00292 366 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 TRIM38O00635 465 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 MGST3O14880 152 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 CHRM5P08912 532 aaPredicted RBP0.44□□□□□ -2.34
CCDC7-215ENST00000639629 THBS3P49746 956 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 CXADRP78310 365 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 CDC42EP1Q00587 391 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 B4GALNT1Q00973 533 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 TP53BP2Q13625 1128 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 LLGL1Q15334 1064 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 TCEA2Q15560 299 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 TKFCQ3LXA3 575 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 C4orf46Q504U0 113 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 DDX53Q86TM3 631 aaKnown RBP0.44□□□□□ -2.34
CCDC7-215ENST00000639629 LRRTM3Q86VH5 581 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 CKAP2LQ8IYA6 745 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 CMTR2Q8IYT2 770 aaKnown RBP0.44□□□□□ -2.34
CCDC7-215ENST00000639629 CHTF18Q8WVB6 975 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 GCC1Q96CN9 775 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 PNKPQ96T60 521 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 CD244Q9BZW8 370 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 RBM12Q9NTZ6 932 aaKnown RBP0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms