RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 DLG4P78352 724 aa18.59■□□□□ 0.57
CLN6-218ENST00000637223 C9orf57Q5W0N0 161 aa18.59■□□□□ 0.57
CLN6-218ENST00000637223 CD300LGQ6UXG3 332 aa18.59■□□□□ 0.57
CLN6-218ENST00000637223 TAS1R1Q7RTX1 841 aa18.59■□□□□ 0.57
CLN6-218ENST00000637223 VPS52Q8N1B4 723 aa18.59■□□□□ 0.57
CLN6-218ENST00000637223 CSGALNACT2Q8N6G5 542 aa18.59■□□□□ 0.57
CLN6-218ENST00000637223 PARD3BQ8TEW8 1205 aa18.59■□□□□ 0.57
CLN6-218ENST00000637223 MRPL38Q96DV4 380 aaKnown RBP18.59■□□□□ 0.57
CLN6-218ENST00000637223 ANKRD36BP1Q96IX9 119 aa18.59■□□□□ 0.57
CLN6-218ENST00000637223 MED15Q96RN5 788 aa18.59■□□□□ 0.57
CLN6-218ENST00000637223 GPR62Q9BZJ7 368 aa18.59■□□□□ 0.57
CLN6-218ENST00000637223 ENTPD7Q9NQZ7 604 aa18.59■□□□□ 0.57
CLN6-218ENST00000637223 TLR9Q9NR96 1032 aa18.59■□□□□ 0.57
CLN6-218ENST00000637223 DACH1Q9UI36 760 aa18.59■□□□□ 0.57
CLN6-218ENST00000637223 NUB1Q9Y5A7 615 aa18.59■□□□□ 0.57
CLN6-218ENST00000637223 COL4A4P53420 1690 aaPredicted RBP18.59■□□□□ 0.57
CLN6-218ENST00000637223 NLRC5Q86WI3 1866 aa18.58■□□□□ 0.57
CLN6-218ENST00000637223 CHD7Q9P2D1 2997 aa18.58■□□□□ 0.57
CLN6-218ENST00000637223 SF3B1O75533 1304 aaKnown RBP eCLIP18.58■□□□□ 0.578e-9■■■■■ 155.1
CLN6-218ENST00000637223 TMEM189-UBE2V1I3L0A0 370 aa18.58■□□□□ 0.56
CLN6-218ENST00000637223 MAPK13O15264 365 aa18.58■□□□□ 0.56
CLN6-218ENST00000637223 TNNC2P02585 160 aa18.58■□□□□ 0.56
CLN6-218ENST00000637223 ITGB3P05106 788 aa18.58■□□□□ 0.56
CLN6-218ENST00000637223 KRT13P13646 458 aa18.58■□□□□ 0.56
CLN6-218ENST00000637223 CA8P35219 290 aa18.58■□□□□ 0.56
CLN6-218ENST00000637223 DUOXA2Q1HG44 320 aa18.58■□□□□ 0.56
CLN6-218ENST00000637223 SKOR2Q2VWA4 1001 aaPredicted RBP18.58■□□□□ 0.56
CLN6-218ENST00000637223 PLPP4Q5VZY2 271 aa18.58■□□□□ 0.56
CLN6-218ENST00000637223 SCARA3Q6AZY7 606 aa18.58■□□□□ 0.56
CLN6-218ENST00000637223 ALYREFQ86V81 257 aaKnown RBP18.58■□□□□ 0.56
CLN6-218ENST00000637223 C1orf127Q8N9H9 656 aa18.58■□□□□ 0.56
CLN6-218ENST00000637223 MICAL1Q8TDZ2 1067 aa18.58■□□□□ 0.56
CLN6-218ENST00000637223 AUTS2Q8WXX7 1259 aa18.58■□□□□ 0.56
CLN6-218ENST00000637223 B3GALT6Q96L58 329 aa18.58■□□□□ 0.56
CLN6-218ENST00000637223 TCF25Q9BQ70 676 aa18.58■□□□□ 0.56
CLN6-218ENST00000637223 MKNK1Q9BUB5 465 aa18.58■□□□□ 0.56
CLN6-218ENST00000637223 HERC2P3Q9BVR0 1158 aa18.58■□□□□ 0.56
CLN6-218ENST00000637223 ZBP1Q9H171 429 aa18.58■□□□□ 0.56
CLN6-218ENST00000637223 MTCH2Q9Y6C9 303 aa18.58■□□□□ 0.56
CLN6-218ENST00000637223 TDRD15B5MCY1 1934 aaKnown RBP18.57■□□□□ 0.56
CLN6-218ENST00000637223 ANO9A1A5B4 782 aa18.57■□□□□ 0.56
CLN6-218ENST00000637223 SLC16A3O15427 465 aaKnown RBP18.57■□□□□ 0.56
CLN6-218ENST00000637223 EFEMP2O95967 443 aa18.57■□□□□ 0.56
CLN6-218ENST00000637223 SOD2P04179 222 aa18.57■□□□□ 0.56
CLN6-218ENST00000637223 KRT19P08727 400 aa18.57■□□□□ 0.56
CLN6-218ENST00000637223 TRIM49P0CI25 452 aa18.57■□□□□ 0.56
CLN6-218ENST00000637223 TRIM49CP0CI26 452 aa18.57■□□□□ 0.56
CLN6-218ENST00000637223 POLR2BP30876 1174 aaKnown RBP18.57■□□□□ 0.56
CLN6-218ENST00000637223 VAMP7P51809 220 aa18.57■□□□□ 0.56
CLN6-218ENST00000637223 STX1AQ16623 288 aa18.57■□□□□ 0.56
CLN6-218ENST00000637223 FOXR2Q6PJQ5 311 aa18.57■□□□□ 0.56
CLN6-218ENST00000637223 INTS8Q75QN2 995 aaKnown RBP18.57■□□□□ 0.56
CLN6-218ENST00000637223 TMC7Q7Z402 723 aa18.57■□□□□ 0.56
CLN6-218ENST00000637223 TMC2Q8TDI7 906 aa18.57■□□□□ 0.56
CLN6-218ENST00000637223 ZNF516Q92618 1163 aa18.57■□□□□ 0.56
CLN6-218ENST00000637223 CEP63Q96MT8 703 aa18.57■□□□□ 0.56
CLN6-218ENST00000637223 SRRTQ9BXP5 876 aaKnown RBP18.57■□□□□ 0.56
CLN6-218ENST00000637223 ANO10Q9NW15 660 aa18.57■□□□□ 0.56
CLN6-218ENST00000637223 AGAP1Q9UPQ3 857 aa18.57■□□□□ 0.56
CLN6-218ENST00000637223 CITO14578 2027 aa18.56■□□□□ 0.56
CLN6-218ENST00000637223 PIRO00625 290 aa18.56■□□□□ 0.56
CLN6-218ENST00000637223 FSCN2O14926 492 aa18.56■□□□□ 0.56
CLN6-218ENST00000637223 TYRO3Q06418 890 aa18.56■□□□□ 0.56
CLN6-218ENST00000637223 BFSP1Q12934 665 aa18.56■□□□□ 0.56
CLN6-218ENST00000637223 CCDC40Q4G0X9 1142 aa18.56■□□□□ 0.56
CLN6-218ENST00000637223 C1orf220Q5T0J3 134 aa18.56■□□□□ 0.56
CLN6-218ENST00000637223 FAM171A1Q5VUB5 890 aa18.56■□□□□ 0.56
CLN6-218ENST00000637223 C11orf57Q6ZUT1 292 aaPredicted RBP18.56■□□□□ 0.56
CLN6-218ENST00000637223 TRAPPC11Q7Z392 1133 aa18.56■□□□□ 0.56
CLN6-218ENST00000637223 FILIP1Q7Z7B0 1213 aa18.56■□□□□ 0.56
CLN6-218ENST00000637223 RNF168Q8IYW5 571 aaPredicted RBP18.56■□□□□ 0.56
CLN6-218ENST00000637223 BORCS6Q96GS4 357 aa18.56■□□□□ 0.56
CLN6-218ENST00000637223 LMCD1Q9NZU5 365 aa18.56■□□□□ 0.56
CLN6-218ENST00000637223 SIX4Q9UIU6 781 aa18.56■□□□□ 0.56
CLN6-218ENST00000637223 ITGA11Q9UKX5 1188 aa18.56■□□□□ 0.56
CLN6-218ENST00000637223 SYCE3A1L190 88 aa18.55■□□□□ 0.56
CLN6-218ENST00000637223 FAM86C2PA6NEL3 165 aa18.55■□□□□ 0.56
CLN6-218ENST00000637223 C2CD2LO14523 706 aa18.55■□□□□ 0.56
CLN6-218ENST00000637223 SPTLC1O15269 473 aa18.55■□□□□ 0.56
CLN6-218ENST00000637223 GPR37L1O60883 481 aa18.55■□□□□ 0.56
CLN6-218ENST00000637223 URODP06132 367 aa18.55■□□□□ 0.56
CLN6-218ENST00000637223 CTSAP10619 480 aa18.55■□□□□ 0.56
CLN6-218ENST00000637223 POU3F3P20264 500 aaPredicted RBP18.55■□□□□ 0.56
CLN6-218ENST00000637223 ERCC5P28715 1186 aaPredicted RBP18.55■□□□□ 0.56
CLN6-218ENST00000637223 CLDN10P78369 228 aa18.55■□□□□ 0.56
CLN6-218ENST00000637223 RBP5P82980 135 aa18.55■□□□□ 0.56
CLN6-218ENST00000637223 ELAVL2Q12926 359 aaKnown RBP18.55■□□□□ 0.56
CLN6-218ENST00000637223 TPD52L1Q16890 204 aaPredicted RBP18.55■□□□□ 0.56
CLN6-218ENST00000637223 TIGD5Q53EQ6 642 aa18.55■□□□□ 0.56
CLN6-218ENST00000637223 KIAA1841Q6NSI8 718 aa18.55■□□□□ 0.56
CLN6-218ENST00000637223 USP37Q86T82 979 aa18.55■□□□□ 0.56
CLN6-218ENST00000637223 CEP57Q86XR8 500 aa18.55■□□□□ 0.56
CLN6-218ENST00000637223 CXorf38Q8TB03 319 aa18.55■□□□□ 0.56
CLN6-218ENST00000637223 KHSRPQ92945 711 aaKnown RBP eCLIP18.55■□□□□ 0.568e-8■□□□□ 8.3
CLN6-218ENST00000637223 MMRN2Q9H8L6 949 aa18.55■□□□□ 0.56
CLN6-218ENST00000637223 NGRNQ9NPE2 291 aaKnown RBP18.55■□□□□ 0.56
CLN6-218ENST00000637223 C11orf16Q9NQ32 467 aa18.55■□□□□ 0.56
CLN6-218ENST00000637223 STK39Q9UEW8 545 aa18.55■□□□□ 0.56
CLN6-218ENST00000637223 ARMCX3Q9UH62 379 aaPredicted RBP18.55■□□□□ 0.56
CLN6-218ENST00000637223 PRRC2BQ5JSZ5 2229 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms